Array 1 1885368-1884981 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGFV010000001.1 Enterobacter hormaechei strain H2F4R NODE_1_length_2533465_cov_71.932891, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1885367 28 96.4 32 ..T......................... TGATTTCCTCCACTGACGGCGGCACCACTGTA 1885307 28 96.4 32 ..T......................... CTCCAGCCCCGCGGAAATTCGAGAAGAAATTG 1885247 28 100.0 32 ............................ TGTTGCTGATAGACCAGACTGTCGAGTAAAGG 1885187 28 100.0 32 ............................ TGTTGCTGATAGACAAGACTGTCGAGTAAAGG 1885127 28 100.0 32 ............................ ATAAAGCGATCCACGCGGTTCCAGCCGTAGAA 1885067 28 100.0 32 ............................ TCATCAAGTGTGAGGCTGTGTGATTTTATTGT 1885007 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 94.9 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTTCGCAAACGCAGCCCATTTGCCGTTGTCTCGGTGCTTATCTGGACGTAGTCAAAACCGAACTCGCAGAATCAATGTGTGACTTTCAGGTGGTTGAATTTGACGACGAGGCGGAACGGCTGAAGGAAAAAGAATGGCTTCTGGAAGATACCGAAACCAAGTGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGTTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGCAATTCATATCATTAATTGACAGTGGTGTAGCGCGTCGGGGGAGGGACTCCGGCGCGGTATGGCGAAACCCTTTTTACGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTGTTTCT # Right flank : GCCGAAACTAAACCCAACCAACCGTTCAAATAATCGACTGTCCTGACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGAC # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1901081-1900511 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGFV010000001.1 Enterobacter hormaechei strain H2F4R NODE_1_length_2533465_cov_71.932891, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1901080 28 100.0 32 ............................ AAATCGCCAACCAGCATGGCGGCCTTATTGCT 1901020 28 100.0 32 ............................ AGAAAAATTGCGCTGGACTATTTGGGGATCCG 1900960 28 100.0 32 ............................ TTCCAGTGCATGTCTGAATGCACGACTGATCG 1900900 28 100.0 32 ............................ TGATGAGCCGCTCTGACATGGCATCGTTCATC 1900840 28 100.0 32 ............................ GCATGACGGAGCGGGACTTGTGCCAGGCACTC 1900780 28 100.0 33 ............................ TACGGCAGTGAACGGCAATGTCGGCGCTATGGA 1900719 28 100.0 32 ............................ CCTCCTCGATTGAGAAACCCATTTCAAATAAT 1900659 28 100.0 32 ............................ CGCCGCTGCACCGAGGAAATCCAGCAGGCCAT 1900599 28 100.0 33 ............................ TACGAGCAGCAGAGCATACGTCGAACGTTGTGC 1900538 28 75.0 0 ....................TAGGCTC. | ========== ====== ====== ====== ============================ ================================= ================== 10 28 97.5 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : GTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCATCTCCTTTATGTGATATCGCTTACAAGCTTAGAAGAAAGTGACTGTATTGCCTGCACAATACCCCTCAATTAAAAGTGGTTTTCCTGCGCGCGTATTCAGCATGATCTGGTTATCGACTGGATGAAAACAGATTTTATTTCAACGGGTTATGTGTTTTTTTGAACGCTATTAATGAAAAGCTGTAGCACGACGATTTTGGCAAACTCTTTTTACCCCTTGCCTTCGGCGGGCTGATGCTGGCGTTTTCAGGGGCAGGGCGGTTTGCGCGGGGAAAGGCCCGGCGGGGAAGAGAGAGTTGGATGCTGGAATGCAGGAAGGGGACCGCGGACCCTTTTTTATAGGTGGATTTTAAGTGGTTGATTTTATTGTGCTGAATGGTAAGTGGTAAAAAAGGTTTTTGAGAGATTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCTG # Right flank : ACGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCGAAAGGCAACTGAGCTGGCCTGCACGGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCGAAAGGCAAATGAGCTGGCCTGCACAGGTAAAAAAGCCCGGTAGCTTTAACGCTTACCGGGCCTGCGGGTGAACAGAGACAGTTTATGCCAGAACAAGATCGCCCTGTGGATGGCATGAACACGCCAGCACATAACCCTCTGCAATTTCTGCGTCGGTGAGCGTCATGGTGCTGGTGACCGTATATTCACCGGAAACCACTTTGGTCTTACAGCAACCGCACACCCCGGCACGACAGGCCGCCACCACCGGTACGTTGTTGCTTTCCAGCGCTTCAAGCAGCGTGGTGCCCACGCGGCCAAAGAAGCTCTGCGCCGGTTGCAGCTTCGTGAACTTCATCCCGCTGGTCG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //