Array 1 4305-3298 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDKN010000086.1 Streptomyces sp. CNZ748 contig_85, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 4304 32 90.9 28 ........-.....................TC. ACCCGCGCGGCTTCACCATGGCGTCGAT 4244 33 90.9 28 .............................CA.C CATTCCCCCTTGTTTCACTCTGCGTGAG 4183 33 90.9 28 .............................C.AT CGACGACACGAACTGGCGCGGCACCCCC 4122 33 90.9 28 .................A...........A..T ACCGGCAGACGGTGGGCGAGGAAGGCAT 4061 33 90.9 28 .............................C.AC CCACGCCACCAGCGTCGACCACCTGCTG 4000 33 93.9 28 .............................T..A CACCGCCCCACACCCCGTGCTGCTCCCG 3939 33 97.0 27 ...............................C. GCTTCGCACGGCGTGGCTCATCGCCAC T [3910] 3878 33 93.9 28 ...........T.................C... CGTCTCCGTCGGGGGTCCACATGATGTG 3817 33 90.9 28 .............................CAC. ACGCCCGCGGCCGACTGGCCGGCGTCTG 3756 33 90.9 28 ............................A.A.C CGATCGACCGGGCATATTTGGCGACGGT 3695 33 90.9 28 ..............................TCA CCAAGGCCGGTATCCGGGCCGCGATCGG 3634 32 93.9 28 ........-....................C... CGTGGTTGGCGCGGCCGTCGCCGCAGAG 3574 33 100.0 28 ................................. CGACCGTCACCGCGTACTTCCCCGGCGC 3513 33 93.9 28 ..............................A.C GACCCCTGCCCGCGACACGGCGGCAGCA 3452 33 93.9 27 ................A...............A GGCCACACGGTTCCAGCGGCGCCCGGA C [3423] 3391 33 87.9 28 .........A......T.............T.C CGCTCGACGAGGGGTTCCTGCAGTCCAC 3330 33 66.7 0 .C.T............T......CCGA.TCG.C | ========== ====== ====== ====== ================================= ============================ ================== 17 33 91.1 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGGCGG # Left flank : CATCGTCCAAGACGTCCAGTCCCTGCTCACCCCGCCCCACACCACCACAACCGACGACACCGACGAGGAACACTCCGAACGGCGCGACGTACGCATGGTCCACCTCTGGGACCCCAAAACCGGAGCCCTCCCCGCAGGCGTCAACTACGCCACAGGAGAAGCCTGATGCCCTCCATGGTCGTCATCGCCACCACCGCCGTCCCCGACCACCTACGCGGCGCCCTCAGCAGATGGACCAGCGAAGTCGTACCCGGCATCTTCGTCGGCAGCGTCTCCGCACGCGTCCGCGACGAACTCTGGAACGCCGTCACCGAAGTCGTAGGAACCGGCGCCGCCCTCCTCGTCCACCCCGCCACCACGGAACAGGGCTACGCCATCCGTACCGCAGGAACCCGCCGCCGGGTCCCTATCGACTTCGACGGCCTTACCCTGATCCGTATGACCGCCGCACCAAAGGTAAAGGAAATGCAAAGCCCCTCTTGAGGTGCAGGTCAGAGAGT # Right flank : AGCGGCATCGGCGCCGTCGTCGTGCTCCTAATCCTCGCCTTCCTTGCCGCTGGCCCGACGATCCGCCCTCCCTCATCGCGCCGGACGTGCACCTTGCGCTTCCCGTGGATGAGGGCACGAGAAACCTGCCCCCCAGCATCCGGCGCCGCGTTCCAGACACGCTCACGTGCTTCGGCCCGCGCGGCCCGTATCGCGGACAGGGCTTTCGGCCCGGCGGCATCGAGGGCGTCGACGAGCCGGGAGACCGTCGGGTCGGAGGCCACCGGCCCGAACACGCCGAGCTCGGCCCGCAGCATCCCGACATCCGCGAGGCAGTCCCCGCCCAGCGCGACCGCCAGGGCCACGTCCAGCAGGATCTTCCCAGGATCGTGCACCGCCCGCGGCCGTCGCCACGGCGCAAGCGCCGCCGATGTCGCCTGGTCCAGCCCGGCCTTGCGGGCGATCTCCACCAGCAGCACGGCCCCGGCCTGGGACACCACCCCACGGCCACCGCCCTCAAC # Questionable array : NO Score: 3.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:-1.5, 6:0.25, 7:-0.00, 8:1, 9:0.13, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGGCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 14180-15369 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDKN010000086.1 Streptomyces sp. CNZ748 contig_85, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 14180 32 87.9 28 .....-............A...........G.T GCGCGGGTGTACGAGAGGAGGCCCTCCC 14240 33 90.9 28 .............................GGC. GCCCGGACGTCGACAGTAACCAGGACTG 14301 33 87.9 28 ................TA...........C.C. CCGCTGTGTCTGCTGCCGTGGCCCCACC 14362 33 93.9 28 .......................A........A TGAGCAGGTCGAGGTGGTCGAGGACTTC 14423 33 87.9 28 .......................A.....G.CC CGGGAAGGTTGCTGCCCTCTCGGAGACC 14484 33 100.0 28 ................................. ACGCTCCGGACGCGAAGGTGAACAGCGC 14545 33 87.9 28 .............................CTAC GCCGCGGTCGTTACGTCCCCGCGCTCGA 14606 33 93.9 28 .................T..............A TGCCTAGGCCGCTCACTCCCCCACCTTC 14667 33 93.9 28 .............................C..C GCACGGAGCCGCTGCCGCCCATCCCGAT 14728 33 84.8 28 .....................A.......CACT ACAGGCAGGGTCCTGGCCCTCGTTGGTC 14789 33 93.9 28 .............................C..T GTTTCCGGATCCCGTGCCCAGACCCGGT 14850 33 87.9 27 .......T............A........C.A. GTCGATCGCGGACAGTTCGGTGGCGAG G [14880] 14911 32 81.8 28 ....-.T..C...................GT.T TCGCGCAGATCGGCCGGGACACCGGGCG 14971 33 90.9 28 .............................CG.C CCCTCCTCGTCGTGAAACACCGTGGAGA 15032 33 100.0 28 ................................. CAGTCCGCAACCGTCCGGACCCCGACTC 15093 33 81.8 27 ............A....A...A.......AAC. TGAACGTGAGGTCGTAGCCGTTGAGCC 15153 33 69.7 26 TGT..T..T.......G...A.G..C.....C. CTGACCGGGCCCATCGCCCGCATGGC AT [15177] 15215 33 75.8 24 A......T.A..AG....AA.....C....... CGGCACCCCGCCGTACTGCTGCAC GACT [15244] 15276 33 84.8 28 .C............T..A...........CA.. GCTTGGTGTTGCCGGCGATGTCGTCGGC 15337 33 93.9 0 ..................C............T. | ========== ====== ====== ====== ================================= ============================ ================== 20 33 88.5 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGTCGG # Left flank : GACGACGACAACGCCGAGACGAACGCACGACCCTCCCGAGGGATGTGGCGCGACCTCGGCCCAGTCTGCGCTCTGGAGATGCAGTGTCCCGGTTCCTGCACAAGTTCGTCCTGCGTCGCGAAGTACTTCTCGGTACCTCACGCGTAGTGGTCAGCGCGGTGATCCGTGCACTGACCAGCGAACTCGTCAGCTGGCTCTTCTGAGCCAACGGTGACGGACCCCAGGGGTCCGTCACCTTTTGTCTGCAAACGACCCCCGCTGCCCGAACACGTTCTGCATAACCGGGCCACGCCGCAGGACGAAATGCGCGGCTACAAGCGGATGATGCCGACTCCGTGCGAGCGTAGATGACCCCGCCCTCACCGTCGCACCGGACGGCACAAGCCGCCTCGAGCACGTCGATGCATGAGGGCCTAAACCTGCAGCAGACTCCAACAACACACCCCTGTCCCCCCTCAACAAGCTGGCCAAATGATCGCCCCTCCGACGTTCATCGTGAT # Right flank : GGACGTCCCCGCCCACCTCGCCTCCTAAGCCGGCCTCACTCCCGCCACCCGCAGCTCGGGCTCCTCGATCCGCGGCGAACAACCCTCCCACCGCGGAAACAAGCAGCTCAAACGGGCGTTCTTCCTCTCCGCGTTCGCCGCCTGGCCCATCCGGCTCCCGCACCTACTACGACAAGAAGATCAGCCAGGGCAAGCACCACACCCAAGCCCTCCTCTGCCTCGCCCGGCGCCGGGCCGACGTCCTCTTCGCCATGCTCCGCGACGGCACAGCCAGTGGCGGTCACATGACCTACGGGCCGGCCAGCAGCAGCACACGGTCGGCCTCAACGCCGAAGCCGCGAACCGGATGGAGCGGATCGGACTCCGGGCTCAGCAACACCGGCTTGCCGAGCCGACGCCCCATTACCCGCAGCAGACGGCACAGCACATTCACTCCGTGCTGCCCCTGCAACTCCCGCAGATCAACGTCGAAGTCGATCGAGCCAGCCTCATACGGACGA # Questionable array : NO Score: 4.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.42, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGTCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 16340-18136 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDKN010000086.1 Streptomyces sp. CNZ748 contig_85, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================================================================= ================== 16340 33 81.8 87 CG...........................GACG AAGGCGAGTTCTACACGTACAGAGACGGACCATCCCCGCCGACGTAGGGGTTCCGGCACCACCGTGACCACCAGCCCCGCCGACGAG C,A [16343,16356] 16462 33 90.9 28 .............................A.CG GGCCGAGCTGCGCCGCGATCGTGCCGAT 16523 33 93.9 28 ............A.................G.. CCTTGCTGTCGCGTGGGTGCAGGGCAGG 16584 33 84.8 28 ........................C....ACCA AGTCGCCGTCGCGTGAGTTCGCGTGGAT 16645 33 93.9 28 .............................G..G AGTGGGCGAACCTGAACATTCGGGTGGA 16706 33 90.9 28 ...........T..........C.........G CGGAGCCGTTCGCGGTGCTGGGTGGGAT 16767 33 84.8 28 C.......................C.....CCT CGACGTGGTCGCCGAGCCAGGCAACGTG 16828 33 93.9 28 ...T.........................A... TGTGGCCTGCCGCGCTGCCGATGGCCGC 16889 33 97.0 28 ..............................C.. TGTACGCCGGGTGGCTGGGGGTGCTGGG 16950 33 90.9 28 ...................T.........G.C. GCCCGGCAGCGACCCCGAACATGACCGT 17011 32 84.8 28 .....-....A...................CCA CGTCCTCGGCCAGCCCATCCCCGACTCG 17071 33 100.0 28 ................................. GCGCGGTGTCCTCGTCGATCTCCAGTTC 17132 33 90.9 28 .............................TC.A TGGCGAGCGCCTCCGCGATGGTCAGATC 17193 33 97.0 28 ................................A TCACCACCAGCGAAGCCGCCGGCACCGA 17254 33 90.9 28 ....................A........G..T CCGCGATGTCGTCCGCGCGCGGGCCCAT 17315 33 93.9 28 .............................G..A CAGGGTTGTACCAGCACGTCCCCGAGGA 17376 33 90.9 28 ....................A........G..G CGAGTCGACTCAAGACGGCCGTTCCCTC 17437 32 84.8 28 .....G..............A..-......A.A CCACCCGGTGGCTGCGGATGGAGGACTG 17497 33 84.8 27 .......G....................AAAT. GGGCGACAAGGCGTCTGGGTCGCCCGG 17557 33 87.9 28 ......................C......TCA. TCGCTGAGGTCGCGGTGACCCATCGGCT 17618 33 87.9 28 .......................A......CCA TCAGGTGCCGGCCGACGGGGGTGCTTCT 17679 32 87.9 28 .....-...............A.......GC.. GCGAGATGATAGAGGGCGTGTTGTCCGA 17739 31 81.8 27 .....A..T.......--......C....T... CATGCGCGAGGACGTGGTGCTGGAGGT C [17770] 17798 33 93.9 28 .............................AC.. TCGAGATGTCCATAGGCGCCGTGGAACT 17859 33 87.9 28 ..................A.....C....TG.. AAGACATCCTCGAGGGCCTGGAGCGCGA 17920 33 93.9 28 .....T..........................A CGCCGGTCTCCGCTGAGATCGCGCGGAG 17981 33 93.9 28 ..............................A.G TCACCATTGCTGCTCTGGGTCTGCTTGA 18042 33 90.9 28 .............................AGC. CGGAGGCGTTGCGCACGAACAGCTCGTG 18103 33 84.8 0 ....................C.....A...GTA | C [18128] ========== ====== ====== ====== ================================= ======================================================================================= ================== 29 33 90.1 30 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCTGC # Left flank : AGTCGATCGAGCCAGCCTCATACGGACGAAAGATCACCAGGACTTCAGGAACCGGCCAGACCCTCAGCACCACGTCGGCGCCCTCACCACGGGCCAGCATCTCCGCAGCCCTCGGCAGCCAGGCCACAGCACCGTCCTTGGAGTACTCGCACGACCACCCCCTGCGACCGAACGAGATCAAGCACCGCCTGCCAGTCCTCCACCGAGGTATCCGGGACACGGACGTCCGGCAGCGACCCCATCAACTCGGCAGCAAAGAAGCTCTTGACGTCATCCCATAGCAGGTCAGGCATCACGCCATGCTGCCTTGCCACTCACCGAAACGCAGCCCGATTCCCTTGACGAGACCCATAGGGGCACCCCCCACACACACCACGACCCTGAGCCACAACTGGCCGATAGAGTCACAACCAGCGATCCCCGCACCGCCCGCACCTTGACTCAACAACACACCAAAACCACACCCGCTAACTGCCACTTACGCACTACTCCGACAACAC # Right flank : AGTGCAGCCGGCCCGGGGTATTCCGCTCGGTGGGGGCCGCAGTGCCTCTTCGGCAGCAGGCGACCCGCTGTCGGTGCCCCGAACCTTGCCCGCCTCCACGCGTCCCGCCACCATGAACACACCAGGACACAGCACGAGAACAGGGGGCAGCATGGATTGGCCCAAACCGCCTGTATCCACCAACCCGTTCCTACCTCCCCTCGAGCCTCCACCTGCCGCAGCGTCAGGCAAGACCTCCGCCCGGGCCCGACAGGAGGCCAACAACCGCCGCCGCGCCGTCAATGCCGAGCACCACCGCCGTGCCGAAGCAACCCGTCGGCGAGCCGCAGCGCAACGCAAACGCGAGGCCGAGGCGGTAGCCCAGGCAGCTGCCGGCAGCAGGAAACCCCCCGTCGTCCAAGTCGGCCAGAGCATCCACACCATCTCCGCTGGACTACCCGGCCTCGGCAAACGACGCTGACCACACCCAGGCAAGGCCGTGGCCGCCCGCCCCCGGCCAC # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:-1.5, 6:0.25, 7:-0.14, 8:1, 9:0.07, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCTGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [12-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 18647-20274 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDKN010000086.1 Streptomyces sp. CNZ748 contig_85, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================= ================== 18647 32 78.8 28 T..G.T...-....T.............AC... CCCAGCCCGAGGCCGTCAAGCAGCTCGG 18707 32 97.0 30 .............................-... CGGGCCTTGACCAGTTCGAGGACTTCGCCG 18769 32 87.9 28 .........A.......-...........A..C GCGAGGAGGAGATGCGCCGCTTCCTGTC 18829 33 87.9 28 .....T........T................GA TGGCGCGGACGACGTCGGTGACCTGGAG 18890 33 87.9 26 .........A.......T............CT. CCGTTCAAGCTCGTCGGGAAGACCCC CC [18919] 18951 33 87.9 30 ..........T...................CGA TGATGTCGGTCGCCGTGATGTCCCTGAGGG 19014 33 93.9 26 ..............................C.C TGGTTGATGATGTTCTTCAGGTAGTC TG [19043] 19075 33 90.9 28 ...........T...................TC GCCGGGGTGCGTCACCGCAGGGGCGTGG 19136 33 84.8 28 T............................ACTA GCGGGGCAGCTCCGCATCCCGGCTGTCC 19197 33 97.0 29 .............................C... CTGAGCGACTCCCCAACGGAGTTCCGGTC 19259 33 84.8 28 ..............T....A..........GGT ACCGTGTCGGCGTAATCGTGGGCGGCGC 19320 33 84.8 28 .....................C......AAC.T TCCGGGATGGTCGTTGCCGAGAACACCA 19381 32 87.9 26 .........A...........-..C.....C.. CGAGATGAACAAAGGGCGTGTTGTCC CC,G [19389,19414] 19444 33 72.7 23 .....A..T.......G....C.....GCCAT. CGCGAGGACGTGATGCTGGAGGT CC [19467] 19502 33 87.9 28 T.............................AGC TCAAGGGCAAGAAGATCGAGATCACCGC 19563 33 90.9 23 ..T..................A..........A GAAAGGTAGGCGCGGGTCCGGGC 19619 33 78.8 28 ..T.......AT.................CCGA GCCAGTACAGGCGGGGCACGGGCAGGCC 19680 33 90.9 28 ..T..........................AG.. CCGTGTAGTCGTTGGTCACGAACTTCGC 19741 33 97.0 28 .............................A... GGTGGGGGGTCGGATACATCGTCGACCC 19802 33 90.9 28 .............................CCT. CGGAGCCTGCCGGCCCGACTCGGAGCTC 19863 33 97.0 26 ..............................A.. GGGAAGCGGACGGCGTCGTACGCCGC TG [19892] 19924 33 97.0 27 ................................C GGCCCTCGGAGTTCTTCGCGCGCACCC C [19953] 19985 33 93.9 28 .............................T..A TTGAGCCTGGGTCGCCGTGGTCGTTCTC 20046 33 93.9 28 .............................C..T CGCCGCTCTCGACGTCGGTCAAGTCCCG 20107 33 90.9 28 .............................TGG. CGCGCACGGCCGGCCCCGGGCTCGGAGG 20168 33 100.0 41 ................................. GATGGTTCCGCGACCTGGTCGACTCGGCGTCCTCCCCGCCC 20242 33 72.7 0 ..........T....AT..A.A..C..T..C.T | ========== ====== ====== ====== ================================= ========================================= ================== 27 33 89.1 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGGTCG # Left flank : CCCGGGGTATTCCGCTCGGTGGGGGCCGCAGTGCCTCTTCGGCAGCAGGCGACCCGCTGTCGGTGCCCCGAACCTTGCCCGCCTCCACGCGTCCCGCCACCATGAACACACCAGGACACAGCACGAGAACAGGGGGCAGCATGGATTGGCCCAAACCGCCTGTATCCACCAACCCGTTCCTACCTCCCCTCGAGCCTCCACCTGCCGCAGCGTCAGGCAAGACCTCCGCCCGGGCCCGACAGGAGGCCAACAACCGCCGCCGCGCCGTCAATGCCGAGCACCACCGCCGTGCCGAAGCAACCCGTCGGCGAGCCGCAGCGCAACGCAAACGCGAGGCCGAGGCGGTAGCCCAGGCAGCTGCCGGCAGCAGGAAACCCCCCGTCGTCCAAGTCGGCCAGAGCATCCACACCATCTCCGCTGGACTACCCGGCCTCGGCAAACGACGCTGACCACACCCAGGCAAGGCCGTGGCCGCCCGCCCCCGGCCACTGACCTGAACT # Right flank : TCGGAATTCTCGGGCACAAGCCCGGACATGCCCGCGTTCCTGGTAGCCGGCGGCCTGGCCGCTGGCCATTAGGGGGTCATGTGGCGGGTTCGTAGGTCACGGTCTGCTCCGGACAGTCGGCTGCCGTTTCACGTAGGGCCGCTACTTCGGTTTCGTCGGCCGCGAGGCTCCAACGGAGCTTCGTGCCGACCCACTCGGCAACGTACCGACAGTGCACCTCGGCGGCTGGCGGCAGCCACTCGGCAGGGTCCTGGTCGGCCTTGGAGCGGTTCGAGCGGGCAGTGACCGCAACTAGGCTGGCCTCGGTTCCCTGGTCGTTGGCGTACGCCTCACGCCGCTGCGCCGTCCACGCCGACGCCCCGCTGTCCCAGCTCTCCGCAAGGGGCACCATGTGGTCGATGTCCAGGCCGGAGGCGGATGTCACCCACACCTGGTCGTAGTACGACCACCAGCGCCCGCCCGACATCCGGCACCGGGTCCCGACCGTGGGCGCCTCGACG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.45, 5:-1.5, 6:0.25, 7:-0.07, 8:1, 9:0.08, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.15 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //