Array 1 5871-5600 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAND010000027.1 Vibrio metschnikovii strain M12C Scaffold27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5870 28 89.3 32 ..G.G.G..................... GTAGCGATAATCCGGCGCTCGTTGAACCTAAC TC,A [5858,5863] 5807 28 100.0 32 ............................ GAGAACGTGGGGGATTATCTCTAGCGTGACGC 5747 28 100.0 32 ............................ TTTTCGCGCTCGCCCTCTTCCGCTTTGCGCCT 5687 28 100.0 32 ............................ ACAACATGCAACGGTCATTTTGAAAAGCTTTT 5627 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 96.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTTATCAAGTTAGTCGAGATGAAAGGCACTTTGAAAAGACGGCAGTTAAAATGCGCATTGAACACGGAGTTCCGTGAGCGAGTTTTATTTGGTAATTAACATTTTGTTAACT # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGCACTTTCTTGAGTTTTGTATAATAAATAGATAGGAAAAAATATGTCAGTTTTAGGTATTAGCTTAGAGAGAAATGGATTGAGGTATGCAGTGCTTGATGGAACGAAAGCGGTTCCAAGCCTTATTGGTTTTGAGAACGTACAAACCAATAATTTTACTAGCATACAACAACTAATGAATTGGTATGAAACTACTTTTCAAAACCTGCTTTCTCGCTACTCACCCACATCTATTGGTATTAAAGTTTCATTAAATGCGAAAAAAGATCAGATATCCCCTTGGTACTATCCTCTTGGACTCCTTCATAATATGGCATACCAAAATAATATTGGTACATTTGAGTTTGT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //