Array 1 1067419-1071791 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZF01000001.1 Schleiferia thermophila strain JCM 30197 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 1067419 46 100.0 30 .............................................. TTTTGCTATCCAGTTGAGCAAACACCCGCA 1067495 46 100.0 30 .............................................. CCGCACCTACGCCTACCGCAACGCAGTGTA 1067571 46 100.0 30 .............................................. CATCGTAAGCTTCTTTTACTTTTTCTTTAT 1067647 46 100.0 30 .............................................. GTTGAGGTTCAGCTTATAAAAGAGCTGGAA 1067723 46 100.0 30 .............................................. CGAATTTATGGAAGGAGTCGTTTGGTGGTG 1067799 46 100.0 30 .............................................. TATGCGCACAGTTAAAATACGGGTGGCCAG 1067875 46 100.0 29 .............................................. GATGGAGATAAGCGAGTACCGAGTGTTAT 1067950 46 100.0 30 .............................................. GTGCCATGATTAATAAATACGAATTTCCGA 1068026 46 100.0 30 .............................................. CCAACGTGATAGCTTAGACTGCCGCTCACA 1068102 46 100.0 30 .............................................. CTTTCGAGCGCTCAGGGAAAGATGGCCAGA 1068178 46 100.0 30 .............................................. ACAAGTCGTCGTAGTAGTCGCTTAATGGAG 1068254 46 100.0 30 .............................................. AAACAACGATTACTTCGAAAGCGTTTCAAA 1068330 46 100.0 30 .............................................. CTCTGCCGTCAATAGGGTCAAGTGCCATGT 1068406 46 100.0 30 .............................................. CTAACCTATGAGCAGATAGCTGATGGAGGC 1068482 46 100.0 30 .............................................. CTAAAGTCGGAATACGATCTTTACGTAAAA 1068558 46 100.0 30 .............................................. TGTCTGCCTGCGGTCTATTCGTCCACCAGT 1068634 46 100.0 30 .............................................. CAATAATTGCAGTATCCCCTTTTTCTTTAC 1068710 46 100.0 30 .............................................. CCTGCCTGCACAAAGTAGTAAAAATCATCG 1068786 46 100.0 30 .............................................. AAAAAGGATGCTTATCTTTGTTTTGTAATT 1068862 46 100.0 30 .............................................. ACACTAAGCACATTTAAAGCTCCTTTTATG 1068938 46 100.0 30 .............................................. ATCTCGCCAAAACTCCTGATTGAACTGCTC 1069014 46 100.0 30 .............................................. TAAGAAGCAATCACTTAAAAACAGAAAAAA 1069090 46 100.0 30 .............................................. TATGTCCAGGCTGATACGTAAGCCAGAGCA 1069166 46 100.0 30 .............................................. TGTTTCTGAGGTTGTGGAAAAGGAACACAA 1069242 46 100.0 29 .............................................. TAGGACGAAAACGTAAAGAGATGTGAAGA 1069317 46 100.0 30 .............................................. AACGTCCTGAATTTCATACGATTCGCCATC 1069393 46 100.0 29 .............................................. ACATTGAGGCGTACGAGGTGCTTAAATTA 1069468 46 100.0 29 .............................................. CTATTATTGCGAGTTTGGAGTACCCAGAA 1069543 46 100.0 30 .............................................. GGGTGGCCAGCAATTTAGTGGCCAGTAACT 1069619 46 100.0 30 .............................................. TTTGTAAATCCAGTGCGACTTATGCGACGG 1069695 46 100.0 30 .............................................. CGCATATTGTTTTGCGTGAGAAAGCGTTGG 1069771 46 100.0 30 .............................................. TTAGGTTGACGCCTAAAAAAACACATTCTT 1069847 46 100.0 30 .............................................. GAAAAAGTTTAGGTAAATTACCTACAAAAC 1069923 46 100.0 30 .............................................. CCAGCGAAGGTACTTCTTCTGCTTCGTCAA 1069999 46 100.0 30 .............................................. ACCGGGCAATGCAAGAGCGCAATCGGCAGA 1070075 46 100.0 30 .............................................. AGCCAAATTGAGGAGCTGCAAACCGACAAG 1070151 46 100.0 30 .............................................. ATAGAAAGGTCGAGCCGGTAAGGCTTTCTG 1070227 46 100.0 30 .............................................. AGTCGCTTGTCTCTGTGCCTGGTCCATCAA 1070303 46 97.8 30 ..................G........................... GATTTACATCATCCTGTTTCGGATTTATTT 1070379 46 97.8 30 ..................G........................... TCAAAGGCTTTGCGCTGCTATTAACCCGGT 1070455 46 97.8 30 ..................G........................... AAGTCATCAGGGTAGAAAGGATGTCTTTTT 1070531 46 97.8 31 ..................G........................... CGGATATTGAAAAGTTCAAAGTCAGAGCCGA 1070608 46 97.8 30 ..................G........................... AAAAAAGAGGGGAAAAATAAAGCAGCACCA 1070684 46 97.8 30 ..................G........................... TCTTGAGAATATAACGTTTGACGGCAGGGA 1070760 46 97.8 30 ..................G........................... ACTTCAAGAGTTGCATGAAAACGGCACTCC 1070836 46 97.8 30 ..................G........................... CCAATATGGCATTCATCCACAATAAGATAG 1070912 46 97.8 30 ..................G........................... CGATAACACATTTAACCCTGAAGGGATAAG 1070988 46 97.8 29 ..................G........................... TCTATTATTTCTTTTAGCAGCAATATAGC 1071063 46 97.8 30 ..................G........................... GTATGGTTTAATTTTTGTTAAATCTCTCAT 1071139 46 97.8 30 ..................G........................... GAAGACACCGTACGACTATTTCTCGGAAAC 1071215 46 97.8 30 ..................G........................... ACTCATGGCGCAGCCTACTTTCCGCGAAGG 1071291 46 97.8 30 ..................G........................... AGTCGCTTGTCTCTGTGCCTGGTCCATCAA 1071367 46 97.8 30 ..................G........................... GATTTACATCATCCTGTTTCGGATTTATTT 1071443 46 97.8 30 ..................G........................... TTGAACAACAAAGATATGTAGGCCTTCATT 1071519 46 97.8 30 ..................G........................... TTCCGGCAACTATATCATCCCTACCAATTG 1071595 46 100.0 29 .............................................. ACAGCGATAATGCCGCTATGTTCTTTTAA 1071670 46 100.0 30 .............................................. AGAACTATGAGTGCACTTGAAAAAAAATGG 1071746 46 91.3 0 ......................................G.A.TT.. | ========== ====== ====== ====== ============================================== =============================== ================== 58 46 99.2 30 AATGTCAATGAGCCAAAAATACTAAAAATTGAAAGGAAATCACAAC # Left flank : CAAAAAAATACTTTATCCAAACCTGGAATAACACTGAAATCGAATATGAAAACCCGCTTAAACGCTTACCGAATTATGTGGTTGTTTGTGTATTTCGACCTTCCCACCCAAACCAAACAAGACAAGAAAGCCTATGCCCAATTTCGAAAAGAATTGCTCTTCGACGGCTTTATGATGATTCAATATTCTATCTATGCCAGGCACTGTGCCAGTCGCGAAAACCTTGAGGTACACAAAAAGCGAGTTAAATCCGTAATTCCGGAAAAGGGCAACGTCATCTTGTTTGAGATCACAGACAAGCAGTTTGGGATGATGGAGTTTTATACCGGAAAAACAAAGCCGAAAAAAACACCTGACCAACGAATCATTCAGTTGGAATTGGAGTTGTTTTGATGCAAAAAATCACATAAAATCAAAAAAAAGAGGGTTGATCACCCTCGTTTTTTGATTGCACAACAAGTTGTATTTACCTGGTTATGCGATCTTTAGAGGCTCTTCTA # Right flank : CTTTAACAATCCAAGTACCTTATAGAATATTGTGACAATAACATTTTAACATTTTATACAATAGATTTGATGTTTAATTAATCCCTTAAGAAAACAAATATGTTTTAAAATTTCCATATTAATTCACCATCAGGTTTAATTTCAAAATCAATTCGTTCGAAAACACAATTTAATTTTCGTGCTTTTAATTTTAAACGATATTGATATTTTGATACATCAAATTCAGTATAACCATCTTTTCCATGTGAAAGTTTTTGAAATTCGTCATCTATTCTTGCGTCAATGTGATTTTGTAAATAAATATAAGGTGAACCTATTTCATTAAATTTATAAACAATGAAAACTCTATTTTGCAATTCGTTTGATTTAAGTTCTTTCAATTCCTCCTTGTTTTTTTCATAAAATATTACCTTGTAACCTACTTTTATTATAGCCCTTAAAGGTAAACCAAGTAATTGATTTAGTTCATTTTCCTTCCAAATTTTTTTTATTGAAATACC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATGTCAATGAGCCAAAAATACTAAAAATTGAAAGGAAATCACAAC # Alternate repeat : AATGTCAATGAGCCAAAAGTACTAAAAATTGAAAGGAAATCACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //