Array 1 7609-7341 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFL01000073.1 Salinivibrio sp. PR919 scaffold73.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7608 28 100.0 32 ............................ AACATGTCAGCGCAAGAATATAACAAGTTATT 7548 28 100.0 32 ............................ TTGGTTCTTTGACACTCGATTTTTGTAATCAA 7488 28 100.0 32 ............................ TTTCGTAGGGTGTTTATGACGGTCTTAAACTC 7428 28 100.0 32 ............................ ATTAAAATGTCTTTATCACCTATGCGGGGGGA 7368 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CTGGACGATCTGTTACCCCGACCGTATGTTGCCGCGATTAGCACCGCTTTATGATGTGGTCTTTACGCAGCCTTATATTGAATATGACAACATTGCGTTGAAAATGGCGAAAAGTAAGCGTTGGTATGATATTGGTTTGAGCCATTTTGAACGCTGGTCGCAAGATGTGGGTGTGCCGTGGCAAATGATCAAACCGCATCTGTTGGATACGATCAACTTGGCGAGAGATATCTGGCCAAATCAACTTGCGCAATTACCGATGTTAACGGAGCACAAAGCGATGCTACGTAATCATTGGAAAGCCCTGCACAAGGACTTCACCATCGATTCGTGAGCCAATCTAACGGAGAGCTAATCGGCACCTTCTTACCCTTCTTTTTTAGCCACTTAAAAATAAACAATAAATACAGCTAGTTACGGAATCCCTTTTTTAACAAGGGTAAAAGGCCATTTTTATCCTAACAGCCTGTTGTCACTGACGATTATTACGTTATTCTATT # Right flank : TGATAAATTCAGGCCGCGGATCGTTCACTATCGCATTGGTAGCGGAACGAGCATTATGAATGGTTCGTTCATTAGTGAGGGTGTCTTGTTTTTCTACAAAATGACCAACTAACTATACTCTTTCGTAGCTTGGTATGTAACTCGACGTCTATCGTTAGATTTATTTCTATTGAGTAATCAAAAGGTAACTCGTCGCATGGTTATCATTGCCTAGATTTTCTAACCTAAGCCGCGATTCTCTTCTACGCTAACTCAGTAAAGATGTTTTTACGGATGTTGAGTGCTAGGAGTTGGGTATGAACATCAATAACACCATGAAGTTAGTGTTCTTTATTATTGGTGCAGGAATTGTTGTTAGTTTTGTCACGATCATCCAACTAAATGGGCTGATGAATAAAGTTGATGAAATGGCACAAGTTCGGTATGCCTCGTATCAAACTGCCGATGAATTAAGGCAAAGCTCTGATGATTTAACCCGTCTGGGGCGAACGTATGTTGTA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 22229-22977 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFL01000056.1 Salinivibrio sp. PR919 scaffold56.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22229 28 96.4 32 ................T........... ACGCCCCTTTTCCGTAAACCTTTTTGCCTAAT 22289 28 96.4 32 ................T........... AAATGTTTAAAGAGTCGATAGAGGGTGATTTA 22349 28 100.0 32 ............................ ATACTTATTAACCCCGCTACAAATTTTTTGGT 22409 28 96.4 32 .............T.............. TTCAGCTTGTTGTATTCTGAATCTTGCGGATT 22469 28 100.0 32 ............................ TGATCATGGACCTGCGCGACAAGGATTCGGTC 22529 28 100.0 32 ............................ AGATGTTCACGACGTGGATGCGCTGCGCCGTG 22589 28 100.0 32 ............................ TGGTGACGTGATTGAAGTGATGGACAACTTCT 22649 28 96.4 32 .............T.............. ATACTTATTAACCCCGCTACAAATTTTTTGGT 22709 28 96.4 32 .............T.............. AGGATTGTACAGCGTCACGCTGTACAAAGATG 22769 28 96.4 33 .............T.............. AGAAAGTGCGGATGAAAACACCCGCAAGCTAAA 22830 28 96.4 32 .............T.............. TCCGGCCGCTTCCTTGGTGATGTCGACGGCAT 22890 28 100.0 32 ............................ TTTCAAGCACAGGCTCAGCACTGGGTTGCTTT 22950 28 92.9 0 .............T...T.......... | ========== ====== ====== ====== ============================ ================================= ================== 13 28 97.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTTTATCTACGATTAGCCTTACCGTTAGACGATTTTACTTTATATTGGCTTTTACAATGACTGCGGCCCACAGACGCTGAACGCAGCGCTTTGTGCTTGGTTTTACGCCCGTTTGTACGTTCTCGCCATACTTTAAAGCTGCGCGGCTTTAACTCACGGCGCATCAGTGCAATGACATCATTTTGTCGCAGACCATATAGTGTTTCAATCGCCTCAAAAGGAGTTCGATCTTCCCACGCCATTTCAATAATCCGGTCTAAGTCACCCGGGTCGGTCAGTTGCATACGCTCCTCCTCGTAGTAGAGCGATAGATACGGATAAGTCGAGCCACGTGGATCAATAAGGGGAGATGCCTAAACCCGTTATGACCCTTATTTTTTGGCCATTTAAAAATAAACAATAAATACAGCTAGTTACGAAAGGCCCTTTTTAACAAGGGTAAAAGTCCATTTTTAACCTAACGGCCTGTTGTCACTGACGATTATTAAGTTATTCTATT # Right flank : AGGATTGAATGAGAACTCTTGTGTGCTGCTATATACCTAACGTCGTTCGGCTGAATCAATATGAGTGAAAAAGTTGGGAGTCACTTAAAAAAGCGCTATATTCATTATTCATATTTATGAATAAGTGCGATAGTTATGGCAACAACAAGTTTAAGTTTAGGGGAGCACTGGGAAGTGTTTATTAAAAACGAGGTAGCAAGTGGCCGTTACGGCTCTGCTAGCGAGGTTGTTCGTGATGCATTACGCACGCTTGAGGAACGCAAAACCAAACTGGATGTGTTGCGCGCACATCTTGATGAGGGGGCTCGACAGGCAGCAAGTGACACGTTTGTCGATGATTTTTCAATGGATGAACTGATTAACGACTTGGACGCAGAATCTTGACGGCGAGCCAAACAAAAAAGCAGGTTCGTATTACGCCCAGAGCACGTGATGATCTTAAAAATATTGGTCGTTACACTGAGCGTAAATGGGGAAAAGCACAGCGTAACACTTATTTA # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2040-1347 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFL01000149.1 Salinivibrio sp. PR919 scaffold149.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ==================================== ================== 2039 38 100.0 34 ...................................... GTGGAGGGGATAACCCCTCCACGTTGTTGCTTAT 1967 38 100.0 35 ...................................... TGTAACGATGTGTGTTTTCCTTTTCAACACCCATG 1894 38 100.0 35 ...................................... CACGAAGGCCATAGCGTCGTATACAGGCAGGTCGA 1821 38 97.4 36 ....M................................. TTAATGGGCGTTTGGGTATCAATTAATGAATTTTTA 1747 38 100.0 35 ...................................... CTATTGTGGATGATAAAATAGAAGATGTGCTCAAA 1674 38 97.4 34 ....M................................. CTGCATTTGCTTGGCTGTTTTGCAATTGTCTATC 1602 38 100.0 35 ...................................... GCTAACGGTCAATGGGCTTAGAACTTCCACATCGT 1529 38 100.0 35 ...................................... CAAAGTTCATCGTCTAGGGTATATTCCCTTTCCGT 1456 38 100.0 34 ...................................... AGTTGTTGCTGTAGCATGACTTCATTAGCTTGAT 1384 38 86.8 0 ..............................T..T.TCT | ========== ====== ====== ====== ====================================== ==================================== ================== 10 38 98.2 35 GTCCTCACGGACCACGCCCTGACTAAAGGGATTAAGAC # Left flank : ACAATTTTATCCAAAATGGTTTGCATGGCAGAAAAAGCGGCGTCAGAGATTGCGTCGGTTAGCGCGTCTTTGTCGCCATTATATCGAGAGGGCATAATCCATGGATAAACCCCTATGGCTAATCAGCTACGATGTGAGCCACCCTAAGCGGTTACGGCGTATTTATCAATATTGCAGTCAGTATGGTTGGCCGTTACAAAAGTCGGTGTTCGTGTTTGCGCTTAATAAAGCAGAAAAAGAAAAAGCGTGTCAGCATCTTATTGGCATAATTGATGATAATGAAGATAAGCTATTGTGTATTCCTTTTAATCCCACCGCGGGCAGCTTTCATCTTATGCCGTCCAGTGACCTGGTGATCGCCCATGATGATCCTCGCTTAGCGCGGTTTGTTCAATAATACGGTATGAAAATTGCTTGATTTTAAAAGTTATCCACTGTTTAAAACGACTGTTTATTTTGCAGCTTGCAAAGATAAAAACWATCAGTTATAAGTAGAAACT # Right flank : GTCGTGCCTAGCCCCCCGGGCACCAAGATCGTGAGCGATAAAAAAAGYCCACAGGGTTAACCCTGTGGTCTTTTGCGTGTGCGCATCGTCTAAGTTGCCTAACTGGTGGCGTTTTTGTATTGAATATTGTCAGGCGCAATCGTTAGGCCTTTATACACATAACCCGCTCTGTTGACTTTCCGCTTATGCACGTTATTAATCGTGTAGTACTGGCCTAATTTCTTACCCAGCTTGTCGGTGATTTGCTTGTTGGTCTCTTTTAACAAGCGATTCCATAAATTTTTGTGCCGTTTTCTCAGCTCATCAAGCGGTCGCTCTAAGTCGCTGTTGAACAGAATGTCTGTATCTTTTCTATCGCCTTGGAACAACCAACGCTTGCGGGCTACGCCCGAATCCGTGTCATATTTTACGATTTCCTCCGCGGTTTCTTCGGCGAGCTCTACCCACCTCACTAGATCCCAATCGTCGCGCTCGCTTGGCAATGCGGCACTATCAAAGGA # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCACGGACCACGCCCTGACTAAAGGGATTAAGAC # Alternate repeat : GTCCMCACGGACCACGCCCTGACTAAAGGGATTAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 1 3006-4350 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUFL01000121.1 Salinivibrio sp. PR919 scaffold121.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 3006 38 100.0 35 ...................................... GAACAACTCGAACGTAATATTGTGTCACACATAGA 3079 38 100.0 35 ...................................... GAGAGTGTGTCAAGTGCAGCTTCTGCATCGTTAGC 3152 38 100.0 35 ...................................... ATTGATGCTGACTGCTTATCGAATGATGCTTGCAG 3225 38 100.0 34 ...................................... TTTGATTGATTAAGGGGCCGGATGGCCCCTTTTG 3297 38 100.0 34 ...................................... TCGGTGACGCATTTGACGGCCCTGTTAAATTTCA 3369 38 100.0 34 ...................................... TTAACCACACATCATTCACCGAAAGAAATTGATC 3441 37 97.4 34 .........-............................ CTTTGTTGTAACGAACAATAGGGAAGTGATTAAT 3512 38 100.0 33 ...................................... TCGTTACCCAACCACTTGTTGGTAGGATCTGGA 3583 38 100.0 36 ...................................... GTTTATTAGATAGAAGAAGTAAAGGTGCCGGTTGGT 3657 38 100.0 37 ...................................... CTCAATCATTTTTATGACCTTTGTCTTGTCGTGTTTT 3732 38 100.0 34 ...................................... TCTACGGTGTTGCAGGGAAAAACCCACTGGCTAT 3804 38 100.0 34 ...................................... AACAGGTGAGGAGATTGCTGCACAGAAAATCTGT 3876 38 100.0 34 ...................................... TTAATGTCAACCACATTGCCAGTCTTGACGTAAA 3948 38 100.0 35 ...................................... CTTTACTTTGCTCATAATTTTATCTCCAAATTAAA 4021 38 100.0 35 ...................................... TTAGCATGTTGGTCATGCTGCGGTTGCGGTTTGCC 4094 38 97.4 35 .....C................................ ATAATCCGTCAAAGTCTTTTCTCATTTCTACCATC 4167 38 100.0 36 ...................................... TAATACGGAACCAGTAATTACAAAGGGGAGTTTTGC 4241 38 100.0 34 ...................................... TCAAGTTCCTCTTGATAAGCGTCCTGAACGTCTA 4313 38 94.7 0 ...................................T.T | ========== ====== ====== ====== ====================================== ===================================== ================== 19 38 99.4 35 GTCCTAACGGACCACGCCCTGACTAAAGGGATTAAGAC # Left flank : GATTTATGTGGGAAATGATCAGATTGTCCACCTAAATGGTGACGGTTTTATTGAAGCCGTATCGCCGGCACAGTTTTTACAGCGCTTGGGTGGCTTTAACCCAGCGATAAGTATTTATGTGTCATGCCAAGATGAGCAAGCGGTCGGCTCGCCAGCGGCAGCCACGCGAGCGATGCAGGCGGTAGGCAAACGTCAAGACTACAATATGCTGTTTGACAACTGCCATCAATTTTCGTCGTGGTGTTTGTCGGATAACCGTGCAAACAGCGACAGTTTTACCTGGATGCTAAAAGACACCGCCAAGGCACATTTACGCGCAAATACCTGGCGAGTGTGGGATCGAGAAGATTAAAATAAGATGACAAGACGTTCAATCGCTTACCAGCGAGAATAACAACATGGCACGTCATTTGCTTATTTTTGTAAAATTTAGCGTGTTTAAAACGCTTGTTTATTTCGCAACTTGCAAAGGTCAAAACAATCAGTTATAAATGAAAACT # Right flank : TGTAGGGCCTAGGAGCCTAGGCCCTAGGCCCTTTATTTCACGCCTCGCTTAAAGGGCTCCCTCTTGTGTTTGATTTTCCTACTATCACCGATTGGTGAACCGTGCGCTGGCATCGGATAACAGGTATCCTTACCCTTATCAGTTGCCCGCGATACTGGGCAGCGTTTAATCACCCATTGCCACGGCCCCATACAAGGAGGTGCTATGCAACACGTTCATATCAATCTTGTCTCCAACCAATTGCTGCCTAATCTTATTCCCACATTGGGCGACAACGCCTGCACGCATGTGATCCTGGTGCTTGGGGATCACACCCTCAAAGCCCGCGCTGAGGCATTAGCCGATATGTACCGTGATCGCGATATTGTGGTGACACTCTGCGAAGGCCGCAGCAGTCATGAAGTGGGGGCGCTGAAACAACAAGCGCGCGAAGTGATTGACTGTCTCAGCACCGAGTTTGCCCATATGCGCTGGATATTGAATGCCACCGGTGGCACCAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTAACGGACCACGCCCTGACTAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //