Array 1 27750-27054 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SDQX01000015.1 Limosilactobacillus reuteri strain D4 contig00030, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     27749	    36	 100.0	    30	....................................	TTCCGAAATTGGCAACACGGCAACTCAATT	
     27683	    36	 100.0	    30	....................................	ATTATAAAGGAGCGATAACAATGAAGTTTA	
     27617	    36	 100.0	    30	....................................	TAGCAATCATCCCATCAGCTAAGGACTTAC	
     27551	    36	 100.0	    30	....................................	AAGAATGCCTGGCGATATGATCCGGCTACC	
     27485	    36	 100.0	    30	....................................	ACGGCAAGCGATGATTAGGATCACGAGTAA	
     27419	    36	 100.0	    30	....................................	CGAAAAATTGGTACTAAGCAGGCTACCATT	
     27353	    36	 100.0	    30	....................................	ATATCAATCGCCCCAGCATGCAACAGCTTA	
     27287	    36	 100.0	    30	....................................	ATTTTAATTTTAAGAATAAGACAATCAATA	
     27221	    36	 100.0	    30	....................................	ACACGACCAAAGAAGGGTGGCTAAAACTTG	
     27155	    36	 100.0	    30	....................................	GTAATCTACCAGAAATTAGTGTAGACACCA	
     27089	    36	  97.2	     0	...................................T	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  99.7	    30	GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC	                              	       

# Left flank :   GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGGCTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG
# Right flank :  CTGGGAAGATGTCCTGGAACTCCAATGAAGATTTTAGATGATAAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGTCAACTTCAGCGGGCTTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTTATGATAGGTGGCAGAAAGCCCGTGACTTTAGTCATGGGATGAATGCCACATGATGGTAAAATTGTTATAAGAGGAGGTGAAAGCTATGGATCAGATTATTAAAGGGGTTAAGCTCCGCCTATACCCGAACCGGGGGCAGAAAGATAAACTCTGGCAGATGTTTGGGAACGATCGCTTTGTATGGAATCAAATGTTAAGCATGGCAAAGACACGTTATCAAAATAACCCCAGGGCGTCTTTCATTAACGGCTACGGAATGGACACTCTTCTAAAAGTGCTGAAAAATGAATACCCATTTCTAAAAGAAAGTGATTCAACCAGCTTACAGGTAGTCAATCACAAACT

# Questionable array : NO	 Score: 3.25
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.10] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.68   Confidence: HIGH] 

# Array family : NA
//