Array 1 94812-92769 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJNO01000008.1 Raoultella terrigena strain NBRC 14941 sequence08, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 94811 29 100.0 32 ............................. CCGCCCCAAGAGGCCCACCGGCACTAGCGGCA 94750 29 100.0 32 ............................. GATATGACCAGGGATGAGCGACGTTCGGAAAT 94689 29 100.0 32 ............................. GATTTCGCAGAGCGCAATTTTACGCTTTGCCA 94628 29 100.0 32 ............................. TTAGGGCCCAAAGGAAAGGCGCTCCTTAATGC 94567 29 100.0 32 ............................. GGTAATGAAAGAAATTACACAGCAAACTTTAT 94506 29 100.0 32 ............................. TTCTTTTGATTCGCTCATTTACCCATCCCCAT 94445 29 100.0 32 ............................. ACGATAGCGTGTTTTACCACCGTATCTCAGGT 94384 29 100.0 32 ............................. GCGGGGAACTTAACCGGGTATGATCGGGTTCA 94323 29 100.0 32 ............................. CGACTATCGATCAGCTTGAGCGCGATGTTGCT 94262 29 100.0 32 ............................. CAACGCGGTACCACTGAGCCTGGCACGCCTCT 94201 29 100.0 32 ............................. TTCTGACAGAAACTGTGTTTTGCGAAAAACAT 94140 29 100.0 32 ............................. CCAGTTGATGCTGATCTGGTGATCTGGAACCG 94079 29 100.0 32 ............................. GCGCTGCCTGTCGCCATCCCGTGCCGCCCGTG 94018 29 100.0 32 ............................. TCGGTATGACGTTAACCGCAAAGGACGACGCG 93957 29 100.0 32 ............................. AATCTATCGCTCTTTCTTTATATACCGTATTC 93896 29 100.0 32 ............................. AACGGCGTCAGCCTCCAGTGTCGGGACACGGA 93835 29 100.0 32 ............................. AGCGGCATGCGCTGGTATGGCGTGCGCGTGGT 93774 29 100.0 32 ............................. GATGAGCGCGCAATTATGGCCTCCGGTTATCA 93713 29 100.0 32 ............................. ATGCCATCGCAATCATTTGTTGAGAGTGTTGA 93652 29 96.6 32 ...........................T. CCGTTCGTGAAGATGGGGGAGCCGTACTTCAA 93591 29 100.0 32 ............................. CGCCTTCGCGATGATTTCGCCGACCGACATAG 93530 29 100.0 32 ............................. AACCAGATCTCCGCTCTGTTGGCCAGTATTCA 93469 29 100.0 32 ............................. ATGGCCAGCGACATCAACAGCATGAACCTCAG 93408 29 100.0 32 ............................. ATGAGCAGGACAAGGTTAACGTCGACCTGGCT 93347 29 100.0 32 ............................. TTTCATTGATTTCGTGGTCGAACAGCACAGCA 93286 29 100.0 32 ............................. GCCAGATCAGTATCAGCGGCCTGAATCAGAAC 93225 29 100.0 32 ............................. CCATTCCACCACAACTTATGTTTTAATCTCCC 93164 29 100.0 32 ............................. GTGTTCAGGCTCTGTGTATCGTTGAACGGGAA 93103 29 89.7 32 .......T.................C..A AGATTTAGATCTTTAAAAGAGGTACAGAGCAG 93042 29 100.0 32 ............................. CAGGGGGTTTATGCCCTGCAGAACGTCAACGG 92981 29 96.6 32 ..............T.............. CCTTTCCACCCGAGGTAAAGCGTCAGTACGGC 92920 29 93.1 32 A...........T................ GTTGCGCAGGTGCTGCGCCGCGTGGGGGTCTA 92859 29 100.0 32 ............................. CCGACAAAGAACTTTTTCAGCGACGAGGCTAT 92798 29 89.7 0 ...........A............T...C | G [92772] ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTCGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCGCCGCGACTGCGAGGAAGGCTGGCAGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAATTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGATTTAGTGTGTTGAAAAAAGTCTTTTAATTCAGTTGCATAGAATTAGA # Right flank : TTCCTGGGAGACCAGCAAAACACCGGCTAGCCGCGCTTATCGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGGCGTTCGATGCGGCCGGGCAGCGCCTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCGGGTGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCAAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAATACTGGCGTCGTTACAGCAGCCGGTGCCCTGCGGATAGTCGCGGTTCAGCCCCGGGTTGCTGAAGGCGGCAACGCCTTTGCTACGGGCGATGGCCAGCGCCCGGTCGCGGGTGAGCTTGCGAATCGATGCCGGCGTGCTGCGACCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGATTATCGAGGTTGATCACCAGCAGGGTGTTTTTCTTCTCCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //