Array 1 284771-286995 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVFY01000002.1 Citrobacter portucalensis strain A60 A60_S7_L001_NODE_2_length_518723_cov_20.9124, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 284771 29 100.0 32 ............................. CGGCGCGGGCAGACTGGGCACCGGTGCTGCTT 284832 29 100.0 32 ............................. GGCGAGCCGAACATTCGCAAACACCTGCAATC 284893 29 100.0 32 ............................. CCAGTTCTCTTAATGGGTTTTCTAAAAGAGAA 284954 29 100.0 32 ............................. ATCCGGCGTTCCCCTTCCTCGGTCGACACGTC 285015 29 100.0 32 ............................. CGATATGGAGGATTCGCAGGGCCGACCGCTGT 285076 29 100.0 32 ............................. TCCTGGTCAACGACTCCACCCACCAGCGGCAC 285137 29 100.0 32 ............................. AGGTCCAGGAGAGCGCCATGCGTATCACGACA 285198 29 100.0 32 ............................. CAATTCGGTGCGACTCAGCATCAAATGTTGAT 285259 29 100.0 32 ............................. CAATTCAGCAGCGGCACACCGCCCATGCCCTG 285320 29 100.0 32 ............................. GGATCCAGATCCTCTCCTGCTCCATGAATACC 285381 29 100.0 32 ............................. ACGCAGGGCAGCTCGGCGAGTTTATAACTACC 285442 29 100.0 32 ............................. GGCCAGATCATCAGTCAAAAAATCCTCGTTGC 285503 29 100.0 32 ............................. TTCATCACCCTATTCATTTCCGGTATCGTGCC 285564 29 100.0 32 ............................. CACTCCAAAAATGATTTCCTTCAACCCCTTAT 285625 29 100.0 32 ............................. GTGATATTATTACTCTGTGAACTATCTACCTA 285686 29 100.0 32 ............................. CCAAAGAATAAGATGCTCACCAGTCGCCCCAG 285747 29 100.0 32 ............................. TTTTTTGTATCCAGTTCCATGTCACCTTCGGC 285808 29 100.0 32 ............................. ATATTTCGTCTGTAACAGGTATTCCGGTTGGC 285869 29 96.6 32 ............................A GAGGCGATATTAGCCACGCCTGCCGAGGTTAA 285930 29 100.0 32 ............................. GAAAAATGAGGGGATGACCATGCGCGATTTAC 285991 29 100.0 32 ............................. GAGCAATGGGGCGTCATCCAGCGCACTCTTAG 286052 29 100.0 32 ............................. GTTTCCTTAATGAGCATAGAGCTCGAAACGAA 286113 29 100.0 32 ............................. TGGCAATAACCCGGACCGGGAGTGGATTTACC 286174 29 100.0 32 ............................. CGATTTAAATTCGCCATTGGTTAATTTTCCCC 286235 29 96.6 32 ...........A................. TCATCTTTATAGATGAATCCGATGGGTCATCA 286296 29 100.0 32 ............................. GCATATCCCAGACTTTCCACGTCAACTTGTAC 286357 29 100.0 32 ............................. AAACGCCAGATCCGCGCCAGTAAACAGCACTA 286418 29 100.0 32 ............................. CGGCCAGAATTGCCATTTCCATTTCGCGGGAC 286479 29 100.0 32 ............................. AGGGTGATATAGTTATTACGTGGATTGATTCA 286540 29 100.0 32 ............................. TGGGCTTATCAGTCTTAGATAAAATTGTGAAG 286601 29 100.0 32 ............................. CCTTTTACAAAGAGATGATCAGGCTTGCTGAC 286662 29 100.0 32 ............................. GCTAATTGCTTTTATTTCTCGGTGCTTTAATC 286723 29 100.0 32 ............................. CAAAACTACCAGGTCCGTTTGTCTCGACCATG 286784 29 96.6 32 ............................C GTTGCCGGCATGGTATGCGTCATGGACATCTC 286845 29 100.0 32 ............................. GATACGCCTGAATTCGACGTTATCTCGCCAAC 286906 29 96.6 32 ...........A................. AATTTATCCGGGACTACAACATATCTCTTTAT 286967 29 89.7 0 ..........................GTC | ========== ====== ====== ====== ============================= ================================ ================== 37 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATCGAAGATGTTCTCGCAGCAGGTGAAATCCAACCGCCGTTACCTCCTGAAGATTCACAGCCCATCGCAATCCCACTTCCTGTTTCTGTGGGGGATTCTGGCCATCGGAGTAACTAACGATGAGTGTGCTGGTTGTTGTTACAGAAAACGTACCACCTCGCTTGCGAGGCCGACTTGCCGTCTGGTTGCTGGAAATTCGAGCTGGTGTATACGTTGGTAATGTTTCAACGAAGATCCGCGAGATGATATGGCAACAGGTCTCCGTTCTGGCAGAAGAAGGGAACGTTGTCATGGCGTGGGCAACGAATACGGAGTCGGGCTTTGAATTTCAGACGTGGGGTGAAAACCGACGTATTCCGGTGGATCTCGATGGATTACGATTAGTGTCGTTTCTGCCTGTTTTAAATCAATGAGTTAGCGATCTTTAAAAATACGGAAAAGTTGGTGGATTTCTTGTATGCCAAAAAAGGCTTAAAATTCAGTTGGGTAGTTTTAGA # Right flank : CATTTTAGCGTTACGTATTGAGCCGATGATGTCGTATTCCCTGCTGGCACAGGGACGAAAATGATAGCCCAACGTCTTCATCTAAAAAGGTGCTAAGAGTTTTTACCCGCTTTTGCCAGTTCTTTTACCAGTGGCAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCGGCCCGGTAACGCTTTATCAATGTGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGAAATGAGGCGCTTTTGGCGAGCTGTTGATAGCCATCTTTCTTGCCCAGGTTCCAGTTGGTCGCTTCAACGGAGAGAACGGCAATCCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTGCCTTTCGGATAGTCTTTGTTCAGACCTGGATTGGTGCTGGCAACGATACCGCGGCTGTGCGCGATAGCCAGTGCCCGGTCGCGCGTCAGTTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //