Array 1 21823-21424 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSRY01000089.1 Streptomyces sp. TRM49041 549, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 21822 33 97.0 28 ..............................T.. CCTCGCGGGCCATCTTGTCGTCGAGGGG 21761 33 90.9 28 .............................CT.G CCACGGATAGGGGTACGGCGTCGCTGCT 21700 33 100.0 28 ................................. CCCGCCCGTGATCCGTGAGACCCGCTTC 21639 33 90.9 28 .............................T.CC AACACATGGGTATCGTGTGGTGGCATGG 21578 33 93.9 28 .............................A.C. GCCTGGGCTGGAGTGGTTACCTCAACGG 21517 33 87.9 28 ..T...........T................AC CGGGTCAGCGTCCGGTGAGCCTGCGTTC 21456 33 84.8 0 ........T..T....T..............AG | ========== ====== ====== ====== ================================= ============================ ================== 7 33 92.2 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGGAGA # Left flank : CGTGCCCCAGACGCTCCACCCCGATCGAGCCGAGATCGGTCAACAGGGCGTCACTCAGACCCCCTCGACCAGCCTGGTCCACGAGCTGGAATCCCGAGATCTTGCCTATGTCATGGAGCCCCGCAGAAAGGCCCACCACAGCCCGAGCGTGTTCCGAATCCCCCTCCAGCCCCAGACCCGCAGCGATGCATCGGCGCTGGTTCTCGGATAAGTACCGGTCCCACAACACCATCGCCATCGCGGCAGCGTCCAGAAGATGCCGAGCCAGGGGGTACGGCACAGCTAACCCCTGCGACTTGCCCCACAACGACTCGTCCACGTCTTGCGGCGGTTTCCTCATAACTGGACCCACCCCTCTCCACGGTGAGCTGGATCCAACCAGACAGCACTGACATATGGCCTGGCGAAGACCTGTACCGTGCCGGTATGAGTAGTGCCCACGTCGACCGCAGAATGGTCAAGAACTCGCAAAGGGCCTCCTAACCACCAGGTCAGCAAGT # Right flank : TCGGCGAAGCTGCCGAGATCGCCGACAAGCCCTCCTCCTCGCCGCGAGGGCACTCAAGGACGACCCTCCAGCAGCATGTAGTCAGGCTGGCGTTACCTGAGCCGCTCATGAGTTGTGGGTTCGTCGGCGTCGGATTCTGGTCCGTGGAGGGTCCCTGCGGTCCGACCACCAGGGGCACACGTGAGGCACCGGGAGACTGACAACGGTGCGGCAGCTTGCCTGAATGTGGCCCGGTACCCGACTCCAACGCTTCGGCATTCCGGCCGGTAGGTGGCGGTCGGGTGGCGCCCGGGCGTCGTGCCTCGTTCGCCGACCCCCTACGACCGAGGTGCCGCCGTCGACGCGCGTGCCAGCAGTTCGCCGCGGATCGTCGCCACGCCGCCCGGCGGGGGGACCTCGGCGCCCATGGCGAGGCGGCCGGCGCGTGTGCCCGCCTCCTGGAGGGGGAGGCGGTACGTCGTCAGGGACGGGACGACGTCGACCGAGAAGGGCAGGTCGTC # Questionable array : NO Score: 3.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 30232-30572 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSRY01000089.1 Streptomyces sp. TRM49041 549, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 30232 33 90.9 28 .............................GG.T TGACCGCGTTCGTGCTTGGAGTCAATCT 30293 33 93.9 28 .............................C.T. GCGGAGGCTACCGGCCTGTCTTACAGCA 30354 33 100.0 28 ................................. TCTCCGTCGAGTCGTCGGACGGCTACCG 30415 33 93.9 28 ..............................GG. TGAAGGGGCTGCCGAGCCGGATCGCCTC 30476 33 93.9 28 .............................A..T TGACTCCATCGGACAGTTCGCTGTCCGT 30537 33 84.8 0 ....................CC...AG..G... | CA,G [30553,30562] ========== ====== ====== ====== ================================= ============================ ================== 6 33 92.9 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGTCCG # Left flank : ACCCCAGCAGCCCGCGAAGCCACAACGCCGCAGCCCTCAGCCATCAACCATGCGACACAGCCTCATCCGCTACGACGGGACCGCCACCGTCACCGACCCCACTGCCCTGACAACTGCACTCCTCGAAGGCATCGGCCGCGGAAAGTCCTACGGGGCCGGCCTTCTCAGCCTCGCCCCGGCAGGCACCGGGTGAGCGCACCCAAAGCCGGCGGCGATGCCCGAGCCCGGCTCGCCGCCCCGACCCTCGCCATGCTGCCCCGGGTCGCGGACTCCCTGAGCTTCCTGTACCTCGACATGGTGCGGATCGTGCAGGACGACACCGGAGTCTGCGCCCAGATCCAAGTCGACGACGAGCGCACGGACACCGTGTACGTCCCCACCGCGTCCTTGTCCTGCCTGCTGCTCGGCCCGGGAGTCTCCATCACCACCCGGGCGCTATCAACACTGGCGCGCCACGGAACCAGCGTCGTCTGCACCGGATCGGGGGGCGTACGGGCATA # Right flank : GTTCCAGGGCCCACACAAGGTGGTTGCTCGCTACTGAACCCGTAGGCGTAGCACCAGATCCAGCCGTGCCCGGTCTCGACGAAGGCGACGCTGAACGCGTCGAAGACCTAGGGTGGGCCGAGCCAGACGCAGCGGTTGCGGCCGGTGCGGACGCGGGAGCCGAAGTGCGGGGCGCGGCTCGCGCACAGGGCGCTGTTCACGCCGTCGGCCGCGACGACGAAGTCCGCCCCAGCAACCTCCGGGTGGTCAGGGTCGGTGATACAGGATGGACAAGTACAGACGGCCGGCCCACCACCCACGCAGGCGATCTTCACGCGTCCCTCCCTGACCTCGACGCCAACTTGAGTGACGATTCGTTCACTCGAAGCGGCAGTCGATCTCCGCCCAGACCGTCTTCCCCGGCCCCTGCCGCGCGGCCACGCCCCAGCGGGACCCCACCGCGTCCACGAGGAGCAGCCCGCGCCCCCGCTCGGCGTCGACCGGTGCCCCGACCCGTACCG # Questionable array : NO Score: 5.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //