Array 1 366165-364807 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYBM01000002.1 Streptococcus mutans strain UAB-34 NODE_2_length_679374_cov_20.5361, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 366164 36 100.0 30 .................................... GACGCATTAAAGGCAGATTTAGAGCTCAAA 366098 36 100.0 30 .................................... GCTCACAACTGATGTTGACCTTGGCTTGCT 366032 36 100.0 30 .................................... TTCTGCACTTTGAACAAGCACGGCGATATC 365966 36 100.0 30 .................................... ATTTTAGTCAAGTCACCGCAAGCGCTAAGA 365900 36 100.0 30 .................................... TTTTTCTCGCTTTCTTTCTCGATTCCTCTT 365834 36 100.0 30 .................................... TGAGTTTGATGAAGCAAATCCTGCACTTCT 365768 36 100.0 30 .................................... GCTCCCATCGATAGATGGAAATAAAGCGCT 365702 36 100.0 30 .................................... CTTGGAACATTCGACCATCCTCGATAATCC 365636 36 100.0 30 .................................... ATCTTTAAGAACAAAGACCCAGCAAATGCC 365570 36 100.0 30 .................................... CGGCGGCGTTTGTAAATGTTGTCGACTTGC 365504 36 100.0 30 .................................... TGCTAAACAAATGAATATATTCGATTATAT 365438 36 100.0 30 .................................... TCTTCTTTTGTTCTAACAAGTAGCTTTTCA 365372 36 100.0 30 .................................... ACTCAAGAATAGAAAAGAGGAAATGATACA 365306 36 100.0 30 .................................... ACCCATACTATGAATTTTTTGAAAAAGTGA 365240 36 100.0 31 .................................... CAGCAATCATGGCTAAACCGTTGGTATACAA 365173 36 100.0 30 .................................... ATGAACTTTCTTTTGCTGATGGGTGACTGT 365107 36 100.0 30 .................................... AGCTAAGTTATCGTTTAGATACGCCGTTTC 365041 36 100.0 31 .................................... CAATTTTATCGGTTCCACCTAGACAACCAGA 364974 36 100.0 30 .................................... ATCTGAGATTTAACAAAATCATCTTATCAA 364908 36 100.0 30 .................................... ACTAGCAACACAGCACCTTTCAGCGCAAGT 364842 35 75.0 0 ..........CA.......A.TG..T-.A.T..... | A [364827] ========== ====== ====== ====== ==================================== =============================== ================== 21 36 98.8 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGCGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAAGCGCTAGAAAGATTGATTTCTAGCGCTTTTTTAGGTATAATATAATTAATTAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATAAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : GCATTATGCGAAAGAGTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTGTTGACGTCCTAAGGTTTGATACAGATCTTTAGCTTTTATCACATTGTCCCAATGAATAATG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //