Array 1 3694-2790 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMIA01000021.1 Cyanobacterium aponinum 0216 scaffold21_size111818, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 3693 37 100.0 45 ..................................... GGGTATTGGCCTAATGACCGACAAAACTCCGCCGCCGTAGGCCAA 3611 37 100.0 43 ..................................... TTGAAGCATTGATAACTCGGAAGAAGCATAGAAAAACATATTA 3531 37 100.0 45 ..................................... TCACCACTAACAGCGATCGAAGCTGCATCAATGGAACGATTAGTA 3449 37 100.0 37 ..................................... ATATTAGTGGATGGATGCACGATTCTGTTTTTCCTTC 3375 37 100.0 43 ..................................... CTCCCAACGTTGTAATTGGGAGTTATACGCGTATTTCCAACGC 3295 37 100.0 40 ..................................... ACTACTTCGAGGTATCCCTGTGGAGATACGTATATAGGAA 3218 37 100.0 41 ..................................... TCTTCAAAAAAGGAACACCTCAACCTTCGTACGAGGAGGTA 3140 37 100.0 41 ..................................... ACTCGCTTTGTGTTTTAGCAGTACATTCAATCCCTGTACGA 3062 37 100.0 48 ..................................... GACTTAAACCATTTTCTTTTGCAACAGTTTGCTCATACTCCCCGCCAT 2977 37 100.0 40 ..................................... CATTGAATCATCAAGCCGTGTTCGTCATAAGCAGTGCTTA 2900 37 100.0 37 ..................................... GAATTCTTGTAACCAAGATAATAATTTTCTATACTTT 2826 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================ ================== 12 37 100.0 42 GTTCGATTCCACATTTACCCCGTAAGGGGACGGAAAC # Left flank : TTAACCTAAGCAAAAGGGTAAAGGCTTTGTTTAGGAATAAATTGCGATCGCACTTAATGTAATAAATGATTTTCTGTAATGTTGTGACTAAATTGATTATCTTCGGCAAAAGCTACTAACCATTCTTTTAAATTGCTATATCGCAACTTATCTTTTACTTGTTGTCTTACCGCAATGGCTTGTTCCTGTCCAATAATAATTGACTATATCCTGAAAGAATAAAATTAGTAGTTTATTTGTTGTAAAGAAAAGTAACAAGGGGTTGTAAAAATGTCGCAGTTAGTAAATAATAGTTAGAGTTAGATTTTAAGGTTAATAAGTAAATAACTGAGTGTTAATGCTTAACTTCACTTTTTAATTGTGCTTATTGACGAATAAACGTCTAAAACAAGTTTTTTTACCTTGATAATTTAATATCATTAAGAAATGTAAAGAACTACTTTGTAGTTTTTCGCAGACAGTTTGTAAAAGCTATGTCTGACAAGGTTTCTAACGGCTAG # Right flank : GGCTCAGAAAAAAAAGCCCTACAATAGATACAGAATTAGAGATGATAAGATGAGCAGATATAGCAAAGATTGGAATAAGATTGCGTGTGCCATCAAACAAAAAGCCGATTGGAAGTGTAGTCAATGTGGTGCTGACTTCAAAAATAAATCAAGTAGAGGTAGTTGTCTGCAAGTCCATCACTGGAACCGAATACCAGAAGATAACAGACCAGAGAATTTAGTAGCCTTATGCAATATATGTCATTTAAAATATCATCGTGGCGGTAAAAGTAATATTCTTATCGGTCAATTATCCCTCAATCTATGACTTATCCTACTTGGTATCAAGAAGCGATCGCGCGGGGTATTGATTTTATTGTAATTGTTTACGAGAAAGCAGAAGGCTTCGTATTTTGTCCGAGCAACCTAGAAACAACTTTCCGTGTTGGCGGGGACTATGATGGTTCTTTTTATACTAATGGAGAAGGAGCATTAAGACATTATTATAATTGTCTAAATCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGATTCCACATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 199367-199028 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMIA01000001.1 Cyanobacterium aponinum 0216 scaffold1_size454497, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 199366 37 100.0 40 ..................................... GAAACCTTAAGGCAAGCGAAGGTTGCTTTTTAAGTCGAAA 199289 37 100.0 41 ..................................... GCTCAACATAGCTAAGTTACTCATTTTTAGTTACCTTGTAA 199211 37 100.0 37 ..................................... AGCCATTGGTGTAGAGGAAATAGAAGACGTTATTGAG 199137 37 100.0 36 ..................................... TAGCGTAAAGATGGTTTATTTCCTTTGGTGGAGAAT 199064 37 86.5 0 ..............................TAAT..T | ========== ====== ====== ====== ===================================== ========================================= ================== 5 37 97.3 39 GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Left flank : ATGACGACAATGATATTGAGGCTACGATCAATGTTAAAGCTACGGAAGTGAAAACCAAATGGATTAAACCAGAAAAAAAGGGTAACCTTCTTTATCAGTACATAGATTGCGATCGCGCAGCTCCACCGAGGGTGATCACGTCTAGTGTAAGAAATGATTTTCTGTAATGTTGTGACTAAATTTCCTGTCCAATAATAATTGACTATATCTTGAAAGAATGAAATTAGTAGTTTATTAGTTGTAAAGAAAAATAACAGGGGGTTGTAAAAATGTCGCAGTTAGTAAATAATAAAGACAGTTAGATTTTAAGGTTAATAAGTAAATAACTTAACATTATTGCTTGGGTTCACTCTATAACCGTACTTATTACCCAATAAACGTCTAAAACAGGTTTTTTTACTTTGATAATTTAATATCATTAAGAAATGTAAAGGACTACTTTGTAGTTTTTCGCAGACAGTTTGTAAAAACCATGTCTGACAAGGTTTCCAAAAGATAGG # Right flank : TTTCGATCGCACGAACTCATTAAGTACCCCAAGAAAGGAATAGGGTACTGAAACTAAAGAAGAAAAAACGTTAGACAGAGCAAAAAAAACCTCAGCAATAACTGAGGAGACAATATTTATAATAACGGGTGTAGTAAGCTAGGAGTTCTTTATAAGTTACTAGATAATCTATCAGGAAAAGTTTGAAGTTCCCTAATGCTTTTCTCATAGCCTATGTCACCTTCATTGTGTGTGATGTCGCCATGATTATTGTTCCCCTGATTATAGTAATGATATTACCAATAAGTCTCTAGCGGCGAAACTACCTGCAAAATGAACTCCTTGTAATGTGGGATTATTTTCTTTTTTTGCCATGACCTCAATGCTAAGTAAGTGATTATTATGTTGTTGATTTTAAGGTTCTTCAGAGTTTGGTTATGATAAATTAAGAGAAACAGGACTTCTATAACCTTTATTAAATAGTGTTTATAGTTAAATAAAAACTAAAAGTTAATAAGTTA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 252642-253187 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMIA01000003.1 Cyanobacterium aponinum 0216 scaffold3_size287775, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 252642 37 100.0 36 ..................................... TTTAGGTAATCTCCTGTTTTGTGAGGGGGCATTTTT 252715 37 100.0 33 ..................................... CGACGAAAAAATTAATGCACGTACGGGATGGCT 252785 37 100.0 35 ..................................... ATTTTCGCTGGTGCTTAAGCACTCCCATTTTGGTA 252857 37 100.0 40 ..................................... ATTATTTCTTCTGGTTATCGCAGTTCTGCTGTTAACCGTG 252934 37 100.0 35 ..................................... ATATTTGATTCATGGTTAAAAGCTAACCAATTGAT 253006 37 100.0 38 ..................................... TAGAAAAGGGGATCGGTGATCCCCCAAATAAAAGTGTT 253081 37 100.0 33 ..................................... TTGATTGCGATCATCAAAAATAAAATAATCCTC 253151 37 97.3 0 ..........................A.......... | ========== ====== ====== ====== ===================================== ======================================== ================== 8 37 99.7 36 GTTTAAACTCTTATTAATACCTCTTAGGGATTGAAAC # Left flank : CAGAAACGCTAAACTGTAGATTAGATTCTATTTTACCCTTGGCTGTATAGGTAGCTGTAGGGGTTTTATAGGTAATGTCACAGGTATAACCCGGAAAATTCTCATCCCATGTATAGCGATTTTCGTAAGCATTGCGAAAAAGTTGTTCTGCTGTTAAAGTTTGAGTCATATCTTGATTGTCCTATCTTTTTATTTTCTGATTATAACTCTTTTATTTGAGGGATTATAAAAATATAACTATATAGAAACATAGGCAATCAGCAATATAAGATATGCGTAAGGGATAGGGTGTAAAATTAGACTTGAGAAGATTTACCTCCAAACTCTATATATAGTCTAGTTTCTAGCAATTTCAATTTTTTATAACCTTACGCTCTTTTGTTCACAAGGGTTTTCGTTATTTTTTTTGGACGTTGGTATTGATTTCATTTATAATTATGGATAGGCTTACACAATTGTACCTTGAAAAGTTTATATATCAAAGACTTCGATCGTGGGCG # Right flank : CTTCTTTTTTATGATGGTATGACTTAATAACATTTTGGAGGTGAAATAATGACGATCGAACAAATGATTAAATCCTTTGACCAATTATCAGCACAAGAGCAAGATAACCTATTAGAAATTCTGCGTCAACGTCGCTCTCAATTAACAAAGGGTGAAGATTTAGCTAATGAGAGTGAGTTAGAAGAAGCGATCACCCCTAGCACTACTAAAGTGGAAACAGTGGATGATTTAAAAGTGGATTTAGGCAAGGAAAAACAAGGTTTTTGGTCGGCTTTACAAGATTTTCGCCGTCGGGTTGATTTAGAATCTCTGGATGATGATACTTTTGACAATTTACGAGATAAATCACCGGGTAGGGATGTCATTTTATGAGCCTAAAATATTTGTTAGATACTAATATTATCTCGGAAGCAAAACGTCCTTTACCTAATCAAAATGTCATAAAAAATCTTAGTTTATATTCACAGGAAATAGCCACTGCTTCGGTGGTTATTAGTGAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTCTTATTAATACCTCTTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 1508-130 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMIA01000045.1 Cyanobacterium aponinum 0216 scaffold45_size14214, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================= ================== 1507 37 100.0 36 ..................................... TTTGCAAGATAAACTAAAAACAGCATTGGCAGATGT 1434 37 100.0 40 ..................................... GTACAGCTGTAACCTTCCTGCTTAACTTTTAATAATCTAG 1357 37 100.0 41 ..................................... TAGAAGCTGATACTGATTGTAGGGTTGAGTTCTTTAGTAGA 1279 37 100.0 39 ..................................... ATACTTAATAGGGGGCATTATGCCCCATTAACATAGTAG 1203 37 100.0 49 ..................................... GCCAAAGAAGCGCGCGACAAGGATCTTCCCACCCGCCAGATTCGGCGCC 1117 37 100.0 42 ..................................... AAAGAAGAATTGAACTAGACCATCGGGTTTGATAAGAAGGTC 1038 37 100.0 43 ..................................... AATGCTAGGGTAACGTGGAGGTGATTAGCCTGCACGAAACCTT 958 37 100.0 46 ..................................... TCTAGTGGAGATATGTCTATGCATAAATCTACTAAAATACGTCGTG 875 37 100.0 43 ..................................... TCGTTGAGCAAACTTTTTACGTGCGATAGCTTCCTTCATATCG 795 37 100.0 38 ..................................... TTCACCTATTGAAGATGTTTTAAGAGAATTACGTGTTG 720 37 100.0 44 ..................................... TTCTTATCAGTAATTCTTATTTTTTCTTTTATCTTAACAGTTTC 639 37 100.0 41 ..................................... TTAGTCACCTTATCCCCGGCGAGTAACTCTTCGATGTAAGT 561 37 100.0 45 ..................................... GATACGACCATGATAAAAAACCCTATAACCGAATATTAGGTCATG 479 37 100.0 41 ..................................... GCCCAACTGGCTTAACTTGGAAGAATCCAGTGTTAGGCGGG 401 37 100.0 44 ..................................... GATGTTATTGAAGTTAAAAATTTCCCTGCCGATGTTATCGGCAG 320 37 100.0 41 ..................................... CTCCATAGGAGGTGGTCGTATCATTATTAATTAATCAGCTA 242 37 100.0 39 ..................................... TCTCCGCCCGGAGATTAATCTCTAGGCGGATCCCTGGGG 166 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================= ================== 18 37 100.0 42 GTTAATTTCCTCATTTACCCCGTAAGGGGACGGAAAT # Left flank : ACGTACTCAATTGGCAAAATTATTAGAACAACATTGTGAGAGAGTGCAGTATTCAGTTTTTGAATGTCCTTTAGATGTAAAAAAATTAGAGCATCTTCTCTCTACTCGATGGTTAAAAGTTCTAAATTTACAGGAAGATAGCCTTAGAATTTATCCCCTAGATGCTTCCGCAAAACAAAAAATCAAAATTTATGGACTGAAGGATAATCCTCCCTACGAGTCTCCTGACTATCTCATCTTGTAAATAAGTGTTAAGCTGACTTGTCAATCTGTCGCAGTTAGTAAATAATAGTTAAAAAGAGTTTTAGCAAAAGAAATTTAGATAAGTTCATTTTTTTGTTAATATTCATTTTTATACCCAGAGTATTTTCAGTTTTTGCTCGAAAAAACCTTTTTCTACCTTGACAAAAAAATAGTGTTAAGAAATGTTAAGCGTTATTCTGTAGTTTCTCGCATACATTTTGTACAAGCAAGATGTAGTAAAGGTTTCCAAAGGTAGG # Right flank : TGGTTTAAGTGTGACCTGAACTGGTCATTTGGAATGGAGCGTGTAGCTCTCAGGTGTTTTCTACCACCTACCCTCGTAGAAAGAACTCGAAAGAGTTTGGTCACGACCAAGTAGGTAACGAAACAGTCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATTTCCTCATTTACCCCGTAAGGGGACGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 19409-15911 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMIA01000012.1 Cyanobacterium aponinum 0216 scaffold12_size113388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================== ================== 19408 37 100.0 39 ..................................... ACTAGCAATGTTTAATTTATTTAGAAGAAATAATTATCA 19332 37 100.0 42 ..................................... TCAACTGTGCAAAGGAGGTGAAAATGAATGGGTAAACTATTT 19253 37 100.0 38 ..................................... TTAACATAAGGACGACCTTGGAGGTCTTTATCCCAACC 19178 37 100.0 40 ..................................... TAGCCTGCTCTAAAGCCTGCTCTAGCTTGCCCTTCTGGGT 19101 37 100.0 36 ..................................... CTACCTCAACCGCAAGGTGCACCTCTACTCCCTGTT 19028 37 100.0 39 ..................................... GAAGGAGACGTTAATGACTATCTAGCAGCAGGGGGTAAA 18952 37 100.0 41 ..................................... TTGTGCCTTAATAGTTAGAGATTTATCTAATGCAATAGCAA 18874 37 100.0 40 ..................................... CCTTTGGTGCTAAAAGGTAGGGATTGATCGTGTTGAATTA 18797 37 100.0 44 ..................................... TAGTTCATAACTGATTTATCGTCGAACCACGGGAGAACATGATT 18716 37 100.0 45 ..................................... TCCCGTTTAAAATTTGAATCATTGATAATTCTGAAGAAGCATAAA 18634 37 100.0 35 ..................................... GGGGAACTACCTCCGTTCATGGGGAACCCTCACAA 18562 37 100.0 52 ..................................... CTTAAGCGATGATGCAACAGAATACTTAGCACAAATGGCAAAAGAGGCCTCC 18473 37 100.0 35 ..................................... CTTTACCCGTACGGGCCCGACTAGTAGCTCCGATC 18401 37 100.0 48 ..................................... TTGACCCCAAGCACTTTGTCAACTTCGATAGCGGATTTGACTCCACCA 18316 37 100.0 43 ..................................... CGTAACCCCTCCAACACGAAGAAACGTTTACGTTGGAAGCTTA 18236 37 100.0 46 ..................................... TTTATTTAATGGAGCAATATGTTTAGCACGACCATTAGCTACTTCA 18153 37 100.0 40 ..................................... CTGAGGAGCGACCTCAACATTGCGCTCTACTCCATTTAAG 18076 37 100.0 42 ..................................... ACTTTATTCCCCTGTGAGTAGTGATATGAACATTTATACTTG 17997 37 100.0 41 ..................................... AATAATAATTTATCCGCCCGTTGCTCTCAACGGTAAGGTAA 17919 37 100.0 42 ..................................... ACTCTTTGTCTGCCACCCCGCCAAGGAGATATGACGACGGAC 17840 37 100.0 45 ..................................... CGCTTGATTGTTAATATTACCGCGCATGAACCCCCATTTGAGTTC 17758 37 100.0 40 ..................................... CGGGTAGGACTAGTTTCCCGCAGTTACCTCCACAGAGAGG 17681 37 100.0 45 ..................................... GATACAGCCGCCTTTCTTAGACGGGTTCCTAAATTAGACGCAGTA 17599 37 100.0 36 ..................................... GAAGTTCTTGAATTTGTTGTTCGAATAACATCCCTT 17526 37 100.0 38 ..................................... ACGCTAGAAGCCTCACGCTTAGTTTTCAAAAAAAAAAA 17451 37 100.0 36 ..................................... GCCCCTTTCGGAGCTTAAATTTTATTTAGTAGTCAT 17378 37 100.0 37 ..................................... ACTCTAGAGAGTCTTGAGTAATCCACGATGTCAACTC 17304 37 100.0 51 ..................................... GAAGACAAAGCCCCGCGGTACTTTATTGACGAATTAACCACTCGATCGCAT 17216 37 100.0 42 ..................................... TCCTTCCATATGTGGCACTCTAAGAACTGCCTTTTATGCAGC 17137 37 100.0 40 ..................................... AGGGTAAGGTACCACTCCCTCTAAAGTCGAGGTGAACGGT 17060 37 100.0 37 ..................................... TTTAATCCTATGACAGGGGAATTTAACTACATTATCC 16986 37 100.0 38 ..................................... TATCCATAAAATGTACTGGGTTCTATTTGAAGAACTTT 16911 37 100.0 45 ..................................... ACACTGGAACAATTAAAAGTAAATCCAGTGATGTACATAATAGCT 16829 37 100.0 45 ..................................... ACTCCCAGTAGGTTTAATACCTATCTCCATCAATTTGTCTATGAA 16747 37 100.0 41 ..................................... CGCCTGTCGTTCCATATCCTCAACTTGACGAGTAATAGCGG 16669 37 100.0 47 ..................................... TCTTGGGTAGTTTTACAAGGTAAGCACATTCCTGTAGAGTATGCTAA 16585 37 100.0 37 ..................................... CTATTTTTTGTGATTCAGCTAACCGTTTTGCTTTTAT 16511 37 100.0 49 ..................................... TCTCTAGGGCTAATAACGCTTCTTCTTCTTCTTTAAGTTTTTCCTCCTG 16425 37 100.0 37 ..................................... TTTAAGTATTTCCTCTAGTAGCATTTTTTCCAATGCT 16351 37 100.0 46 ..................................... ATGTCCAACTTCGTGGCAGATTAGAAGTGTCCCTAATTCCATGAAT 16268 37 100.0 47 ..................................... GCGGTGCGGAATGTTGCTGTCATAATTTAGAACTCAAAGACTTCGAG 16184 37 100.0 42 ..................................... ATAGAATGCTTTTAGATACTCCTTATCATACTCTAGGTACTC 16105 37 100.0 40 ..................................... ACAAGTTATTAAGCCCTCATTATCATAAGCTACATAAGTA 16028 37 100.0 44 ..................................... TCCCGTCCCACTGTAGTGTTTTAAGTGATCTGAACAGCAAGAAA 15947 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================================== ================== 45 37 100.0 42 GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Left flank : AGTGTAACCTTCTATCATCGGTGTTAAATAATAATTTATTACATCTTCAATTATTATTCAAAGATAACACAAAACATAATCCTTTTGTATAAAACTTATTTATTTTCTCTATCAGGTAATAGACTGCGATCGCACTTAATGTAATAAATGATTTTCTGTAATGTTGTAACTAAATGGTTTGTTCCTGTCCAATAATAATTGACTATATCTTGAAAGAATGAAATTAGTAGTTTATTAGTTGTAAAGAAAAATAACAGGGGGTTGTAAAAATGTCGCAGTTAGTAAATAATAAAGAAAGTTAGATTTTAAGGTTAATAAGTAAATAACTTAGCATTATTGCTTGGGTTCACTCTATAATTGTGCTTATTACCCAATAAACGTCTAAAACAGGTTTTTTTACCTTGATAATTTAATATCATTAAGAAATGTAAAGGACTACCTTGTAGTTTTTCGCAGACAGTTTGTAAAAACCATGTCTGACAAGGTTTCCAAAAGATAGG # Right flank : GACTCATGTAAAAAAACCCTAAAATAGACACAGAGTTAGAAATGATAAGATGAGTAGATATAGCAAAGATTGGAGAGAAATAACTACAGCAATAAAGGAAAAAGCCCATTAGAAGCGTAGTCAATGCGGTGCAGACTTCAAAAATAAATCAAGTAGTGGTAGCTCTCTGCAAGTGCATCACTGGAACAGAATACCAGAAGATAACAGACCAGAAAATTTAGTAGCTTTTTGTAATACCTGTTATTTAAAATATCATCATGACGGTAAAAGTAATATTCTTAATCGGTCAATTATCTCTTAATCTCTAAATGAAACACTTAAATATCATTATCTCTGTTATCTTTATCTTTGTTTTTACCTTGATAATGTTCGCATCTTCCCTTGTTTACGAACCAGTACAGACAACAGATAATCAATACTATGAATATCGAGCATTACATAACAGGGATGGCATTGGCAAATATTATCTTGGTAGAGAAATAGCGAAGGTGATGGGGCAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 99257-97518 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMIA01000012.1 Cyanobacterium aponinum 0216 scaffold12_size113388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 99256 37 100.0 43 ..................................... TCATAGTCTTTTTTACTTTGTGCGTAAGAGACAGTCCATGGGC 99176 37 100.0 40 ..................................... TCCTTATATCAGGGAACAGTTTCCTGTAGAACCGTTCCAG 99099 37 100.0 40 ..................................... ACCCGGCTTTACAAACCATGTCGATATTGAACTTATTTGA 99022 37 100.0 35 ..................................... AGGTCTTGGAGACAATACGTATGAGCAACTTCAAA 98950 37 100.0 41 ..................................... TGCGGGCCATAAGACCCAGAGGAGTTCATGAACCCACGGGT 98872 37 100.0 38 ..................................... TCTCAACTTCTACGTTGAATTGACGCACTTTATTAGCA 98797 37 100.0 40 ..................................... AGACGAGACAATCGAAGCTGTACGAGAAACTCGCAATAAA 98720 37 100.0 43 ..................................... TTCCATACAAGAGTAAATTTACTCATCGTGTTTCCTAGGCTGT 98640 37 100.0 41 ..................................... GCAAGAGATAATTCTTGTAAATATAACTTAGAGCTTTTACA 98562 37 100.0 42 ..................................... CTCCGTAGAAATTAGCGTGTATTTTTTTTTAAGGTGGGACAC 98483 37 100.0 42 ..................................... TACTTGGCCGTCAGGGATCGACTCGAATTCTTCTAACTCTTC 98404 37 100.0 38 ..................................... GAAAAGATTGATTTATTCACAGACAAAGGAGAATTAAA 98329 37 100.0 35 ..................................... TTTCTAAACGGTTCATTAGATATTTTCAGAAACTT 98257 37 100.0 39 ..................................... TGATATAGTCTCTGGCATCTGAGTTTAAGGTACCTTCTA 98181 37 97.3 35 ...A................................. TTTCTAAACGGTTCATTAGATATTTTCAGAAACTT 98109 37 100.0 39 ..................................... TGATATAGTCTCTGGCATCTGAGTTTAAGGTACCTTCTA 98033 37 97.3 35 ...A................................. TTTCTAAACGGTTCATTAGATATTTTCAGAAACTT 97961 37 100.0 39 ..................................... TGATATAGTCTCTGGCATCTGAGTTTAAGGTACCTTCTA 97885 37 97.3 43 ...A................................. ATCGCTTCCGCGTGGGTTTTATATGAAATTAGTGTACACAGAT 97805 37 97.3 47 ...A................................. TGAAATAGAGGAATTGCCGGATGAATATAAAAGAATAAAAGTAGAAC 97721 37 97.3 47 ...A................................. ACTCTCTCAATTTTCTACATGGTTGCTTGTGAGCAAGTTTAAATATC 97637 37 97.3 46 ...A................................. GGTTGCAAGGAATCAGATCAGAAATGCGATTACTGTTATCAATCAG 97554 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =============================================== ================== 23 37 99.3 40 GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Left flank : TTAAAAGCTGGAAATCGTCTGAAGGCGGCAAATCTTCTGAGAAAAATGGGCAGGTGGAAAGAAGCGGCTTTAACGTGTATAGCAAAAGAAGTCTCTAATCTCAGAGTAACTGATTAGATTCTGCATTCGATAGAGATTGACTCTTCACGTCTAAAGAGACACATTTTATTTTGTCATGTTGATGATTGATTTCTGACAACAATTTAAACTTCAATGGGAATATTCTGATTACCTAGCTTTGTAAAGAAATATTAACTTGACTTGTCAATCTGTCGCAGTTAGGAAATAATAGTTAGAGAGAGTTTTAGCAATAAAAAATTAAATAAGTTCCGTTTTTTGTTAGGATTCACTCTTATACTTACGGTATTATTCATTTTTACTCGAAAAAGCCCTTTTTTACCTTGATAAAAAAATAGTGTTAAGAAGTGTAAAGCATAATTTTGTATTTTTTCGCATACACTTTGTACAAGCAAGATGCAGTAAAGATTTCCAAAGGTAGG # Right flank : GTTATGTAGTAGGATATGATGGGCGAATTTGCCTGCAATCCTAACATCCAGTGCGTATCAATCCTGATACGGGCCATGGTATTGTACTCCTAATAAGCGGGTCGGTATGCATCTTAGTCATTACCGTTCTAGGTTGCCCCCCCAATTAGTAGAACCAATCAATGAGTAGAAAATGTTATCTTCTGAAACTGTTAGTATTTGCCAACTTTCTGCCAACGATCTACCACTCATGGAGGGTTTATTAACTGTCTTTGGCGAGGCTTTTGATGAAGTTGATACCTATAGTTCATCACGTCCAAGCAGCGCTTATCTCAAGCAGTTGTTAGGCAGCGATTATTTCATTGTGCTTGCAGCGTTAAAAAATGGAGCGGTCGTTGGAGGTATCGCCGCTTACGAACTCCGAAAGTTTGAGCAGGAGCGAAGTGAAATCTATATTTACGATCTGGCTGTTGTAGCAGCACATCGACGCAAAGGCATCGCTACCGCATTAATCCAGGAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : GTTAATTTCCACATTTACCCCGTAAGGGGACGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 113225-110534 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMIA01000012.1 Cyanobacterium aponinum 0216 scaffold12_size113388, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================= ================== 113224 37 100.0 43 ..................................... TTGACTACTTTATTTTTTGTAAGTGTTCTCCAGGAACGGAGGT 113144 37 100.0 39 ..................................... ATGGGTAGGCTAATTAAATTTTATTTATGGTTTGACCAA 113068 37 100.0 41 ..................................... TGGGTATCTCTCCTGTAAGAGTAGATAAGGCTGACTTGTTT 112990 37 100.0 40 ..................................... CTTGTAGCTGAAGAAGACTGCTGGGTTAAAGAAATCAACT 112913 37 100.0 39 ..................................... TTGAAGATTGCCATATTATAATTTCTCTTATTGTGCGAT 112837 37 100.0 49 ..................................... TACCAGGGAGGGGATGGATATTTTATCCGCCTAACCTGGGGAGGAAAAC 112751 37 100.0 33 ..................................... ATTGTCGATGCGTTCATGTATAAAACATTCAAC 112681 37 100.0 39 ..................................... GCCGCAGCAGCTTTCGAGAACACTATTTGATCCACAGTG 112605 37 100.0 43 ..................................... TACTACTGATAAGATATTGGATTCTTTGGGCTTCTATATCACT 112525 37 100.0 47 ..................................... GAAGAATCAAGAGGTGGGTGGAAGGAATTAAGCAGTAAAAGATAGAG 112441 37 100.0 41 ..................................... TCGTTACTGGACAATCTCGTTCGAAATTAGCGTGTATTTTT 112363 37 100.0 38 ..................................... CCTTAAGATAAGAATTAGCAGGGTCTTCATTAAAAGCT 112288 37 100.0 36 ..................................... AGCAAAAAGTACCTCAAGTGTAAATGTTGCAGGGAG 112215 37 100.0 42 ..................................... AACTCTTGCTTTTTCTTGAGCTTCTTTATTTAATCGTGCCAA 112136 37 100.0 41 ..................................... TTTGCGCTTTTCCAATTGGATAGCCACAGATTCAATGGAAG 112058 37 100.0 41 ..................................... TTTTTTCTAGTGGCAAAGAGTTTGCTCATCTTCTTCTTGAT 111980 37 100.0 44 ..................................... ATACTCTGTTTCCTTGAAAAAGTAGAAAAAAATTTACTAATTTT 111899 37 100.0 38 ..................................... CCATTTCCTTAAGAGCGTTCATATAAAGCTCTACAGTC 111824 37 100.0 47 ..................................... CTTCCCTTCGTTGAGAAAGGAGAACTTTTCTTGTGGGTATTAGGGTC 111740 37 100.0 39 ..................................... ACATCTCAATGAAGCGACCCAAAAATACTCAAAATCTCC 111664 37 100.0 36 ..................................... TTTGAATAGAAATATTGTCTTTGAATTTCTAAATGA 111591 37 100.0 44 ..................................... AGGGCTTCGAAGGGACTGACTGGTATCGGCACCCTACCGCGGGG 111510 37 100.0 47 ..................................... TGGTTTTGGATGCTTCGATTTGATTCATGTGATTTTTTATATTGAAC 111426 37 100.0 41 ..................................... AAAGTTTTTTAAGCTGTTCGACCTCTTTTTCTGCTTGGAGG 111348 37 97.3 38 T.................................... ACTCTTTGTTAGTTGTGGTTGGGATAGGTAGTCGATCG 111273 37 100.0 36 ..................................... GTTCAAGTACTTATTAATAGCTTCTATGTAACTAGC 111200 37 100.0 46 ..................................... GATCGACTCTAATTTTTTGGCATCTTTTTTACCGAAATTCTTTAAC 111117 37 100.0 48 ..................................... TCCATTCACGATAAACAAAGGCACATAGCTAAAAACAACTATGAAGCT 111032 37 100.0 38 ..................................... ATAAATTAGTAAAAGGGGGCTTTGCCCCGCAGTACTTT 110957 37 100.0 38 ..................................... AAGGCCCCGCCAAGGCCTCTTACAAAGAAAGATTGGCA 110882 37 100.0 41 ..................................... TCTTGAATTTGTTGTTCGAATAACATACTTTTTACCTGCCC 110804 37 100.0 42 ..................................... TGCTCTATCGAACTGCCCCTTTACACTGTCTGCATAACTTAG 110725 37 100.0 42 ..................................... GGAGCCTACGACTTCAACGACCTCGACCCCGGCAGCTACCAC 110646 37 100.0 39 ..................................... TGAGAATTATACAGTTGGGTTTACAAAAAACTCTATTCA 110570 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================= ================== 35 37 99.9 41 GTTAATTTCCTCATTTACCCCGTAAGGGGACGGAAAC # Left flank : GTCATAAACAGGTACATTCAAAATCCAAGTTGAAGGCTTGAAGTAAGGCTTGAGCCGTGTGATGGGAAACTGTCATGCACGGTTCTTAGGGGAGGGGAGATAGGTGACTATCGAACCTTACCCGCTAGAAATTGGCGGCCTGACCAACGAAGATCTTTCTATG # Right flank : GCTTTTGATAAGTTCTACCGATGTTGAAGATGTTAAATAAGATATAACTGAAATTTCAGATTAGTGTATTAATACTAAAAAAGAAAATTTTAAAATCGATTTTAATAAAGTTTTCATCAATTCTTATTACTGTTTTCTGTTCTCCACCTTCAACAGTCCATTTTTGGCTAGATGAAAATCTGACCAAGTATAAAGAAGAGTCACTCATAAGCCGGATTCTGTTCCTTTAAATAAATTAAAGGGGTAGTTATCTATCTGGGATGAATATTACTAATCACCTCAAGCGGTACACCAAAAGCGGAATCGGGAAAAGACCAACCATAATTCCTTCGACCTTGCTCCCAACCGGGGTTTACCGAGCCAGTACCTCTCGATACTGCTGGTGGGCTCTTACCCTCACCTTTGCACCCTTACCTCTAATCGGAGGCGGTATTTTTCTGTGGCACTATCCTCACGCTCGCGCGCACTGGGCGTTACCCAGCAGGTTTGGTCTTTCGGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATTTCCTCATTTACCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 104962-104631 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMIA01000004.1 Cyanobacterium aponinum 0216 scaffold4_size218811, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 104961 37 100.0 34 ..................................... AATTTCTATAAGGATGTTCCAAGGCTAAATATTT 104890 37 100.0 35 ..................................... GAATTTTCCACTCATTTGTACACTGGCGGTTCTTG 104818 37 100.0 42 ..................................... CATCCCAATTAGCCCCAATAATAACCCCGTACCACCACCAAA 104739 37 100.0 35 ..................................... GAGAACACCACCGCCTCATCGGCTGATTGTCGAGC 104667 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 5 37 100.0 37 GTTTAAACTCTAATTAATACCTATAAGGGATTGAAAC # Left flank : GTATATAATTATTAGCTACGATATAAAAGACGATAAAAAAAGAACTAAAATTCACAAAATATTAAAATCCTATGGTGAATGGGTGCAATATAGTATTTTTGAGTGTGAACTAACCGAAACTCAGTACGCAAAATTACGTCATCGTCTCTCAAAATTAATAAAAGACGATTCTGATAGTATCCGTTTCTATTCTATGTGTAAATGTTGTCAAGGTAAAATAGAACGTATTGGGGGTGAAATGCCAAGGGATAATACTATTTTTGTTGTCTAAATAGCGTAAGGGGTAGGGTGTAAAAAACATAATCGGCTAAAAAATTCATAAAGTCTTTACCCCGTATAGTTTACGAATATTTTATTTTCTTATAGCCTTACGCTTCTTTATTTGCAAAGATTTCAGCGATAAAGGGTGGACATTAAAAATGAATTTATTTATAATTGAAGCTAGGCTTACGCGATCGCACCTTGAAAACCTTATATTTCAAAGACTTCGATTATGGGCG # Right flank : GCATTTTCCGTGAATGCGGCAGTCTTGAAAATTGCTAAGGAGTAATTTTGTACTTACAAGGAATTGAAACGACACTAACGATAAATTTTCTTTATTCAAATCCTTGGATGTTTACTTAACACTGAGTGGTCATTTCACTCATAATTATCATCAACATATTTTTTGATTAAGGCAACCCCTTGTTTTTGAAATATTTTCTGGCTAATGTATTCATTTGCACCATAAATTTTTAATTTTAAATAGTTTTGAAAACAAAAATTATCAGCCACTATCACAATGGGTAAAGTTTGATATTCCATCAAGCTACGAACTACTTTGCAAAGTTTTTCTGCTTCTTCATTTCCTGTCTCTAATTGAAAAATTATCAAATCAACTTTTGTCTTAAAAATATAGTTTAAACTCTCACTTAAGTTATTTGCATTTAAACAAATATAATTTTCCCCTTCTAAAATAATTTCTACTTCTTGTAGCCAATTTTTATTTTCACTCAGACAAATTAC # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTCTAATTAATACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //