Array 1 529607-534559 **** Predicted by CRISPRDetect 2.4 *** >NC_021184.1 Desulfoscipio gibsoniae DSM 7213, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 529607 30 100.0 36 .............................. CGATATGTAGCATAATATACTTAACGTATTATATTA 529673 30 100.0 34 .............................. TTCTAGCCACAGCCACGGATCCACCGCGGCTTTC 529737 30 100.0 36 .............................. AGGGCTAAAAAGCCCCAGAGATTTACCCTCCCCCTC 529803 30 100.0 36 .............................. ATGTTGCGTGGGTGGTAAAGAAGAACAAAACAATGC 529869 30 100.0 36 .............................. ATCTGCCACTGTGCCCTTGTGTACTCTTGCTTGGTT 529935 30 100.0 36 .............................. ATCAACATTGCTCACTTCCCCCTATTGAAAAATAAA 530001 30 100.0 36 .............................. CTTTTTAAACAGTTTTTCATCTAGTTGCCTGGCCAC 530067 30 100.0 36 .............................. AAGTAAAACCATGCTCTCGTAAAGTGTCCGGTACAA 530133 30 100.0 35 .............................. AGTGAGGGAGGTGCGATATTTGGAGAGGCCGATTT 530198 30 100.0 35 .............................. CTTGGTAGTTAACTGTTTGCAGGTAGTTTTTTAGA 530263 30 100.0 37 .............................. ATTACACCGTGGGATGATTATTGCAGCGCATTGGCCA 530330 30 100.0 37 .............................. TCATTACCCCCGTTACCCTTCCTTGGCCTCCCCCGCC 530397 30 100.0 35 .............................. TTTTTTAGGTCTTCTTTGATGGAGACAACCAATGC 530462 30 100.0 35 .............................. AATTTTGTACCCCAGATAATGCGCTCCAGCGCCCT 530527 30 100.0 36 .............................. ATATAACAAGTGGTCGGCTTTATCTGCGCAATGCAC 530593 30 100.0 37 .............................. TTGGTTCTTATTGGCATTCTCATTCTGAATATCTCCT 530660 30 100.0 35 .............................. ATGCTTATCGTAGCGGTGCCATTTATGGGAACGGT 530725 30 100.0 34 .............................. GACTTACAGGCGGCCGGACCCAACTACCTGGAGA 530789 30 100.0 35 .............................. CCTTGCCGTCCTTGGCCGGTGGAGCTATGCTGTAC 530854 30 100.0 35 .............................. ACGAAATAGGATTCAGGGTAGACGTTGGTGGCCTT 530919 30 100.0 36 .............................. ATGTTTATATCACTGTCTCCGGAAGCGGTGTAAAAG 530985 30 100.0 37 .............................. TCGGTATAAATCAGGGTGTTTTCCCGAGTAAGCGTAC 531052 30 100.0 36 .............................. CATTCATCTTTCCACATAAGCTCTCTCGCATCCTGT 531118 30 100.0 34 .............................. ACGTTGATATAACCGAAAAGGACCGTGAGCGGTA 531182 30 100.0 36 .............................. TTGTGACGCTCTTTGTAATAATGGCAGCGTGGGCAG 531248 30 100.0 35 .............................. ATCTTTCCAACCCGGCACCATTGATTTGCCTTTAA 531313 30 100.0 36 .............................. AAGTTTGACCCCGCACTCACTAAGACATACGCATAC 531379 30 100.0 35 .............................. ATCTTTGATTTACCCATCACCCGACCTGCCTTTCC 531444 30 100.0 34 .............................. TATTTCTGATTCCAGCTTGCTTCGGCTGGAAAGT 531508 30 100.0 35 .............................. ATGCCATAGACTTTTTTAATAGCTTCATAAATAAC 531573 30 100.0 35 .............................. CATCACCGCAGGCCAATTTCCAGGCTGTCTGTCAT 531638 30 100.0 36 .............................. ACCGTTACTCCAATCCTGGCGAGGTAGTATATGATC 531704 30 100.0 36 .............................. CTGGTTCACTCTGTAAATAGCGGTAAACTCTGTGTA 531770 30 100.0 36 .............................. CTACCCCCGCCCCCTCTCGTCTAACTCAGCTAAGGC 531836 30 100.0 35 .............................. TTTAATGCCCGAGCACTGGCCGCCCCGCGTTCCCG 531901 30 100.0 35 .............................. ATAGCACGATCAAATACCCACAGGCCGAGGTTATA 531966 30 100.0 36 .............................. CTGCCTATTCGGGAGATTTACCGTATTTGGGGAAGA 532032 30 100.0 35 .............................. AACAACGTCGGCCCAAAGTCACACCTGTCTATAGC 532097 30 100.0 35 .............................. TTTCGAAGAATAGTTTAATAGCCTGGATGTTCCCA 532162 30 100.0 36 .............................. CAGAATTAAGTGGGGCGTGTTTGAGAAGTTGGAGTT 532228 30 100.0 35 .............................. TGTGAAGATTATTAACCTGATTGGTTGTGTCGATG 532293 30 100.0 34 .............................. GTGGGGGGATGAACACCTGCTTGCCGATGCCCTG 532357 30 100.0 37 .............................. AAAAATTGGAGGTGCGGTAAATGTTAAAAGTGGTTAC 532424 30 100.0 37 .............................. AACTCCAAAACAAGGAAATGACAGGCAAGCAATTCTC 532491 30 100.0 35 .............................. CGAGAATGTACCAGATGAATTTATTGTGCAGGTAA 532556 30 100.0 36 .............................. AGCTCAACCACTGGTAACGTGACCGGTATTTTTGAT 532622 30 100.0 37 .............................. TCGTAACGATGACACCCAGTGGCTCGGTCATGTCCAC 532689 30 100.0 35 .............................. ACCAGCAGAAGGCGGACATATCAAACCAGCGTGAG 532754 30 100.0 36 .............................. AAATCAAGGCGTTACTACTATGATTATGAAGCCATT 532820 30 100.0 35 .............................. ATGGGCAGAAACACCCAATAAATCCAAAGGCAGGC 532885 30 96.7 36 ............A................. AACATAAGGTTTATGTGATGGGAGGTGAGAAAATGT 532951 30 100.0 36 .............................. TAAAACAAGCCCGACGGTTTGTCAGGTGGGAAGTTT 533017 30 100.0 36 .............................. ATTCAATATCCCCTTACCTTACCGTCCATCCAAGCA 533083 30 100.0 36 .............................. CTATAAAATAGGGAGGATCAGTATGTTTAACATTGA 533149 30 100.0 36 .............................. GAGTACATCCGCGTGGCCCTGGTGGGCTGCACTCTG 533215 30 100.0 35 .............................. GTTGCCGAATATAGCGCAAGTATTAGTAAGGTATA 533280 30 100.0 37 .............................. TGGACAGGATGATGTTGATTGTGGCGATGACCAGTGC 533347 30 100.0 37 .............................. CCTAGTTGATGGAAAGATCGTTCCATTCAACTCTAAC 533414 30 100.0 34 .............................. ATGGACTACAAAATTTTCTACTACGAGATTTCAC 533478 30 100.0 36 .............................. TAAATAAGGCCTTCGGCAACTACCCAAAGGCCAGTA 533544 30 100.0 35 .............................. CCGAAATTAATGCTGTTATGTCTCCCAAAATGTTT 533609 30 100.0 36 .............................. AACTGATTCTATGGTATCTCTTAATGTGGATCTTGC 533675 30 100.0 36 .............................. GGCGATAGGCAAATGTGTACATTTTGTGAAAATCGA 533741 30 100.0 35 .............................. AGAAGTGGGAGCAGCATAATTACCTAGTGGAGAAA 533806 30 100.0 36 .............................. CTGTCGTACTTGGTTCTTGCCATTTCTGAACCTTAT 533872 30 100.0 36 .............................. ATGCAGGTTAAATCCTCAACTCCGGAAGGTACTGAC 533938 30 100.0 36 .............................. ATTTCAACCTGGTTATTACCGATTGTCGATATCTAA 534004 30 100.0 35 .............................. CCACCTTTCAGCCGACTGGAGGATATCGCTAATTA 534069 30 100.0 37 .............................. TACCATAGCCATCGCATGTCTGTTAAATGGTGATTAC 534136 30 100.0 37 .............................. TTGCTAGTAAAAGCGAATGCGCTTTTATTTTTTACAT 534203 30 100.0 35 .............................. AGTTCACGTATTCCAGATTTCACACGGGTCATTTT 534268 30 100.0 36 .............................. AGTAGATTGGCATGAGCTTCGGGCCTGTGACTATGG 534334 30 100.0 34 .............................. ATATCTGGGCGTCTGTCTGCAAAATGAGGGCGAC 534398 30 100.0 36 .............................. TTTATTGCATTTTTTATTATCAGTGTTTTCATAATT 534464 30 100.0 36 .............................. AAATATCCGGCCGCATCCAGAACATCTTCAACGCCC 534530 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 76 30 100.0 36 GTGGAACCAACACATTTGATGTATTGAAAT # Left flank : GGAAAAACTTCGTTCCTTTCTGCATGGAGGATAAAAAGTGAACAAGCCAAATTATAATTATGCAATTGTTTTTTACGATGTGGGCGAGAAACGGGTTGCTAAAATATTTAAAATTTGCAAACAATATCTGAAACATTATCAAAAATCTGTATTCAGGGGACACATTACCCCGGGAAACTATCTGGAACTTAAAGGGAAATTAAAGAAGGCTATTGATCCAGACCATGACTTTGTAACCTTTATTCAAACTATAAGCGAGTCTTCTTTCCACGAAGAAAGTATTGGGAATACGGGAGTTAACCCGGAGTCAATTATTATTTGATTTTTTCCAAGTGAGATTATAGAGTTATAATGTTAAGTGTTTGAAAGTAGTGGGGAAGAGGTTCTTTGGATTATATTTATTCTGAAAGTGGGGATCACTTGGAAAAATGAGTGCGAAAGCCTGATATAATGCCCCTTAGAGGATTGTTTATAAGGCAGAAAATATCCAATTTGTCTTG # Right flank : TGCCTCTAATCTGCTCTTGAGCTGGGTCCCCTTGTAGTGGTGTAAATAAGCGCATTGTTTCCGCATGAAACAGGCGCTTATTTGCACATTGGAACAGATTGTCTCTATTTTAATGCCGCTGAAATTTGCTAAACTTTTTGCAGATTACAGCGGAGGTTTTTTATGATTTATTACCATAATTTCTTAGTGGATGTAGCCAAATATGCAGAGCTTGGAAAAGCCAATGAATTTCCTGAATTGGACTGCTGTCCGATGTGCCGGGCAAAAATACGTCTGAAACGCCATGGATTTTATAAGCGAAACGCCATCGAATCGGGAGCGGAGATATATCGAATCCCCATTTGCCGTCTGATTTGCCCAGACTGCGGTAAAACCATTTCCATTTTACCAACCTTTCTTCTCCCATATTTCCAACATACGATGGACTTTATCATCCGTATCCTGCTTACCTCCTGGATTGCCTATCGTCTTCTATGTTCACGGCAACTGCGTCGATTTTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAACCAACACATTTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 2 537907-538658 **** Predicted by CRISPRDetect 2.4 *** >NC_021184.1 Desulfoscipio gibsoniae DSM 7213, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 537907 30 100.0 36 .............................. CGTCAATGGGAGCTATCGGCTCAACCGGCTCATTTT 537973 30 100.0 36 .............................. TGTTCAAAAACAACCTGATCAACTGACTGTCTGCCA 538039 30 100.0 36 .............................. ACCCAAATGATTACCTGCTTAAACTGGTTCAGCCAT 538105 30 100.0 36 .............................. ATTTATACAAGAGAGTGGGTTATTACTAGGTCCTTG 538171 30 100.0 36 .............................. AGCAGCTAATGAATTTGCAAATCGGCCAGCGCTGAC 538237 30 100.0 34 .............................. AATATCTTGGCCCTTCTTGCCTCGCTTGCATCAA 538301 30 100.0 37 .............................. TTTTGCAACGGACATAAATTGTTGCAGTCCGGTGTGG 538368 30 100.0 36 .............................. ACGTTACCTTGACGTGCCGCAGGTTAGTATTATTCC 538434 30 100.0 35 .............................. AAATAGAACGCTTTTCCGCACTCCGGGCAGCATGG 538499 30 100.0 34 .............................. TTCAAGTCTCTGGTGGAACTCCCCGAGTTTGAAC 538563 30 100.0 36 .............................. AGGGACACAATGCTATTCGCACGTTGCGTATTACAA 538629 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 100.0 36 GTGGAACCAACACATTTGATGTATTGAAAT # Left flank : CATCCGCATCGCAGCGCAAGAGAATGGGATGTGATACCCACATGATACCACGGAAACGAGATGGGCGAATCTTGTACAATGTCAAAACCGACCGCTGGGACGTTTGGGATGTTTATTCTAAGCCAGTTGCTTTACATTGCGGAGAGTGCTTCGAGATAAAGCTTGGAGACCACTTTCTGTCCTGCCGGATCGAGATGGACTCTGAGTGGGTTATATACCTTAGCAATACCCGGTTCCACTTGCATCCAAAGGTGAGTTATTGGATTCGGGTGGAATAAATATACTATACCTTGATCTTGTTACGAGGACAAGTCCCTCAAGCAGTCAGTTATTTCCTGGCTGCTTATTTTATGGTAAAAACAGCTGCCGAAATACCGTGATTATGTGATAATTTTAGTTCGACTATGCTTGATTAATGTGCAAAACATTGGTTTACCCCCCATTTTTCTGCTGCTCTATTTTGCAAATGAGGTGCCGGTTTAATTTGCCAATTCACAGTA # Right flank : TGTGTAGATGATGGTGCGCCCGGCATGGGCGCAGTCTAACGGGTGAAAGTCCCGAGTGCGGGTTGATAGTGCCAAGCACATAGCCAAAGGCAAGGGTGTCCATCGCGAGGTGGAATCTGAAGGAAGCCGGAGGCAAACTTCTGGTCTGACGAACAGGAATCACATTAGGCATGTGTAGGCTGGGTAAGGTTGCCATACAAACTGAAGCCCAAAACTATCCGGAAGCCTACGGTGTAGATGTGGCAGATAGATGGAAGGAAAGACTGCGTTCTTACCCGGGGAGGTCTCATGGACGTGAGGAGATGAATTTCAAATCACGGTTGAAACAAGATTTGTCATGAGAAGTCAGCCGAGGCCATAGTACCCGATGAAGTCTACGTCACCGGGGAAGGGCTGAACCTTAGGAGGTGATAGTAAATGAATGTTACCAAGAAAGGAGCAAAGTGCAGCCAACTTCCAACAGGCGGCAGCCGTATGGAAGGCTCACCGCAAAAGAATAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAACCAACACATTTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA // Array 3 547994-548615 **** Predicted by CRISPRDetect 2.4 *** >NC_021184.1 Desulfoscipio gibsoniae DSM 7213, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 547994 30 100.0 35 .............................. TGCAGACATTGCGTTTTCATAAACCACTTTAGCGC 548059 30 100.0 36 .............................. GTCTGAGCAAACATTGCCACCTGCTCAACCCTTGGG 548125 30 100.0 36 .............................. CCAATACTGCATATCCTTGGCAAAGGTGAAATGGAC 548191 30 100.0 36 .............................. GTGGTTCGCGAACTTCTATTTAAGTGGACTTGACCA 548257 30 100.0 35 .............................. AGCTAATGTAAGTGCAAAGATTGGATTAATTAGTT 548322 30 100.0 37 .............................. ACCGGTTAAGCAAAAAACTGAACAGGTAGTTAAGAAG 548389 30 100.0 36 .............................. CCGTTTACACCGAGGTAACCGATGAAGCCAGGAAGT 548455 30 100.0 36 .............................. AAACCTTGGGGATGCCAGTAGCCTACGGTGAGTTTG 548521 30 100.0 35 .............................. TCCTGAGTAGAAAGTGCCTGACGTATAGGCATAAT 548586 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 100.0 36 GTGGAACCAACACATTTGATGTATTGAAAT # Left flank : GCAAAGATGAGAAATAAAGTGAGAGAACTCACCTCCAGGAGCAACGGAATGGGCAATGAAGTCAGAGCAATGAAACTTAGACGCTATATTATGGGGTGGGTCAACTACTTCAAGATAGCGGACATGAAGAAGCTATTGTCTACTACGGATGAATGGATGCGAAGACGTATCCGCATGGTTTTCTGGAAACAGTGGAAACGAGTGAGGACAAGATTTAAAATGCTCAAATCACTTGGAGTCCACGAACAAAAAGCATGGGAATATGCAAACACTAGGAAAGGCTACTGGAGAACCTCCCATAGCCCAATCCTATCCAAATCCCTTAGAAATGATGTACTCAAAGGGTTTGGGTTCCTATTCTTTTCAGAGTATTATCGACAAGTCACAGCGTAAACTAAGGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGGGAGGTCGGCTACTCAACTAATGGGTGGCCTCCTACCCGATTCTATAATCACCTGTTCGGTCTG # Right flank : TACTACAATGGACCCCAATGTCAAGACACGATTTTTTTAAATTCAAAGCGACACTGGGTATAGCATTAACATAAAAACCTTTCCGACTGAATGTTTCGATGCGTTAGAAAGACGCAATAAGGTTAATGTATACTGAGCCAACTAATATTTCACAATAATTAGAAAACATGGCGGTCTCCAGAGGGAGGGGTAGTTATCCCCATTTACAACGCTTAGCCGCCGCTTGCGGTCGGAGCGAAGCGGAGAGTCTTGACTCCATGTGCTAGGCTTAATAAACCCGACCGTAGACAATTGATTTTTTGGCGTATATCCGTCGGTCGGGTTACCCATTAAACAGCACATGGAGTCAAGACCGGCGGTCTCTTTGTTCACATCAGCTTGCTTAAGGTTTGACAGCGGTGTTCTCAAAATATTAACTCAGTAGCCAATTGGCCATTTATTTAATCCCCACTTTCAAATATCCTGGTTATGCAGATTGCTGTGGTAAGTTAGTAGTAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAACCAACACATTTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 4 550376-551189 **** Predicted by CRISPRDetect 2.4 *** >NC_021184.1 Desulfoscipio gibsoniae DSM 7213, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 550376 30 100.0 35 .............................. ATGAGTACGTGAAGGCCAATGAAATCAATAAAATA 550441 30 100.0 35 .............................. ATCTTACCCTTAACCCAAATTAAAGTGTTTAATTT 550506 30 100.0 37 .............................. TTATTTCCTGGTTGCGTTTGATTCGGCTGGGTGTAAG 550573 30 100.0 35 .............................. AGAATAGCGGGTGGAACGCCGATATATGCAAACTA 550638 30 100.0 36 .............................. ATTGATATGGAAACAGGAGAAAGAAAAAAGAATGAA 550704 30 100.0 36 .............................. AGGAATACACCAGGCCCGGCCAAGTCTTTGGCGTGT 550770 30 100.0 35 .............................. GTGAGCAGAGAAAACAAAAAGCCTCTTTCCTCTAA 550835 30 100.0 35 .............................. GCAATTCCTGCGCTTTCTCTTTAGTTGGCACGATC 550900 30 96.7 35 .................A............ TGGTGTAATTGAAGCAGAAATAACCAAAGATGGAT 550965 30 100.0 36 .............................. ACATACAAACCGGTTGGACTAGAAGGCGGGGGATCA 551031 30 100.0 36 .............................. TTAGTTAAATCTCTCCTTTATTTAAAAGTTACTACA 551097 30 100.0 35 .............................. TAATTATGAGCAACAAGGAAAGGCAAAAGCGACAT 551162 28 83.3 0 ....................-.-....GTC | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 98.5 36 GTGGAACCAACACATTTGATGTATTGAAAT # Left flank : CCCGGCCTGAGCTTTTATGGTTAAGTGTGAATTTGAGATATCCCAATCCACCATAGCTTTTCGTTCATTCACGGGGTAAGATACCGCCAGATTTTTTTTTAAGCCAATCCAACTGTGTTGTTAGACGGCCGACTTGCGCGTATAAGTTTTCGATGGTTTCTTCTTGTTTGCGCTTTTCTTGGGCAGCTGCCTTAGCACTCTTAGAGGTGGCGAATACCTTGTCAGCGCCTTCTAAGAGCTCCTTCTTCCAGCGGTGTATCACACTGACATGTACCCCGTATTCCGAGGCAATTTCGCCTATGTGGCGTTCTTCTTTTAGGGCTTCTAAAACGATCTGCAATTTTTGCTCTGGTGACCACTGTTTTTTTTGCATGGGGATGTGCTCCTTTCACTTCTCAGTTTACTTCGAGATTGGTGTCGCTTATCCCCTGCAAAATCGTGTCGCATTTCCTGGGACCATTATATACTGATAGATCAGTCTCATTGGCTATGGTTTTTAA # Right flank : CTCTGAGTGAGATATTTTTAGAAGCAAATGTTAAAATTGATTTCAAAAAGTCCGTATTCGAAACTCTTCTCTTGACAAAAAATAATTTACGTGATATTTTGTTAACTGAAATATTCGTCATCTGTAATTAAATCCACGAGGTGTTATTTCTTGAGCAGCAATATCGATATATACGAATTTATACTGGATAATATTCGGAAGATTGTTGTACCTGAAGAGCTCATTACCTTAGAACTGTCTATATCCAGGTTTGAGCTTTTAGCCTTAATGCTCTCCGAGAAGCATCAAACTGTCACCATGAGCAACCTGGCCCAGGGTATGTCTGTGCCTATGAGTACAGCCACCGGGATTGTCGACCGCCTGGTTAAAAAAGGACTGTTAAAAAGAGGCAGGAGTGAAGAAGATCGTAGGGTCGTGACCGTATCCCTAACGGACAACGGCAAAACTTTAGTTGAGGATTTAAAAAAACATTTCCATGATTTTCTTAACAGGATACGAAG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAACCAACACATTTGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 5 832966-834392 **** Predicted by CRISPRDetect 2.4 *** >NC_021184.1 Desulfoscipio gibsoniae DSM 7213, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 832966 30 100.0 37 .............................. TGTTGTTGGGCGCGGGATTCCATTTGCCCGAAATATC 833033 30 100.0 36 .............................. CCGCCGAGGCCAATTCATCTAAACCGGTCCCGCCGA 833099 30 100.0 36 .............................. ACACATCTGGCAAGGACACAGATTCTGGCTTTAGCA 833165 30 100.0 36 .............................. CCGCCGAGGCCAATTCATCTAAACCGGTCCCGCCGA 833231 30 100.0 36 .............................. ACACATCTGGCAAGGACACAGATTCTGGCTTCAGCA 833297 30 100.0 37 .............................. CAAGCAACAATCGTCCAGAGAAACCACACTACTGAAA 833364 30 100.0 36 .............................. TCTAATATTCTATTCAGCACTGTGGCAAGCTCCCCC 833430 30 100.0 37 .............................. TAGGTCCGGTATACCTTATCAGGCACAACTTCCCGCC 833497 30 100.0 37 .............................. CTGGACAATCGTCACGCGCCTTGCGTTGACCTTTTCT 833564 30 100.0 39 .............................. TGCGCTATGACGGTCTCACTGCAACAGCAGACCACCTCG 833633 30 100.0 37 .............................. TTTTTAATTCTATCTCTATCTTGAATTAAGCGTAGTT 833700 30 100.0 36 .............................. TTTTTGGAGATGGAAACAGGCGTAATTTTGATCCGG 833766 30 100.0 37 .............................. CTGTCCTATATGTGGAATTAGATTCACAGGGATCAAC 833833 30 100.0 35 .............................. TATCTCGCACCCGGGGCAATGTTTTAGCCAGCGGG 833898 30 100.0 38 .............................. TTGCGCAGAAGTCGTATACCTCCTCTGTCCTAGCGCCA 833966 30 100.0 36 .............................. TTAATTCTTCTGCAATCATCAAATTTTACTTCTCGC 834032 30 100.0 36 .............................. TCATTGTGCGGGTCATTTCCAAACCCCATTCCACGT 834098 30 100.0 37 .............................. GCGTATCACCCACTAGGTGCTCACCTCTTTGTGTTCT 834165 30 100.0 36 .............................. ATGCCCTGTGCAAACATACTTACAAAGTTTGGACCC 834231 30 100.0 37 .............................. CGCTCTCGGTTGATAACCTGTACCGCAAGTGGAAGGC 834298 30 100.0 35 .............................. AGCTCCTTCATAACTCCGATTGTTGCCCCGGCCAG 834363 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 22 30 100.0 37 GTTTTTAGACTACCTATGAGGAATTGAAAC # Left flank : AATATCAGGCTTTTGTAGCCAGGTGGTAGAATATAATTAAAGGTTGGTGAAATTACACTGTTCGTTATTCTGGTTTATGATGTTGGGCAAAAGAGAGTGGCTAAAGTATTGAAAAAATGCCGACAGTACCTTAACTGGGTTCAGAATGCCGTACTGGAAGGTGAGGTTTCAGACGCCAATCTAAAAAAGTTAAAAATGGAGTTGGAGCGAATTATTCACAAAGACGAAGACTCGGTCATATTTTACTCTTTGCGTACAACGAAATACTCTTCCCGAGAGATTATGGGTTTAAAAAAAGGAGGAGATGAAAATATAATCTAGAACAAGGGATAAAGTAGGAAAATCTTTGTCGTCGGTCTCCGATAGCGTATAAATGCTAGGGGATCGACGACACTTTGTAATTGAAAAAAACTTGTGGTATAAGGTTCCCGGGAATATTATCACCACAACCCCCAATGTGCTCTTAATTTAGAAGCCTTATTTTTGTGGAAACACGACGG # Right flank : CTTTGTGTAATGCATTTAAATAGTTGCTCATAAAACGTTTTATATTTTATATTAAAATTAAGGTTATGGAGGAAAAACACAATGGGAATCGTCAAAAACATTCAGGGGGTGCTACAAGTGAAACGGTATGTAACCATTTTCTTGTTAGGAATGGTTCTATTTTATGGGGTAGGCTGTTCGAACACAACCAATAATTCTAACACGACAACCAGCCAAATAGTTTCAAAAAAGTACATTGAGAATAAGGGTTACAAAATTGTTTCATACGATGGTATATTCGAAGAATATGTACTGACAAAAGAAAAGATTACCCAAGAACCGTACATACAAGAGTGGGCAGTACAGAGCTTTGAACCCAAAAAATATCTTGAAAAGAAAATAACTGTTGAAAAGTTCACCGTTCAGAACCACCCTTTAGATAAATGGATTCCGATAGGTGGTCTTAACAATGATATCCAATCAACAGGAAAAACTGCAATATATGTTTTTGTGGTAGATAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 6 4241879-4234677 **** Predicted by CRISPRDetect 2.4 *** >NC_021184.1 Desulfoscipio gibsoniae DSM 7213, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 4241878 32 100.0 35 ................................ TTTTTACCATACTTAAAATAATATTATCCAGTAAT 4241811 32 100.0 35 ................................ ATACATATATCTAGTACATTCTCTAGCACCAATAT 4241744 32 100.0 34 ................................ CGTTTGATAAAGCTCTACCACCAATTTTCATATT 4241678 32 100.0 34 ................................ GTGGGCCAGCCCTTGCAAAAATACATTAGTGCTT 4241612 32 100.0 34 ................................ AAAGAAAATGCAAAAGATTGGTCATGGTTGACAC 4241546 32 100.0 34 ................................ AATAGTGGTGTAAATGCTGTTAGCATCTTTTCCA 4241480 32 100.0 34 ................................ AATTTCGTCCCAGGTGTTGGCCATCCCATGGGCT 4241414 32 100.0 33 ................................ CATTTCTGTGACAACATCCTGCCGGCAGTACTC 4241349 32 100.0 34 ................................ TAATGCTAAAATTAACCCATCAAAATCTTCACTT 4241283 32 100.0 34 ................................ AAATAAATAAATACAAAAACAAATAAAAATAAAG 4241217 32 100.0 35 ................................ CGGCATCGCCGGGCGTACCTCCAGGCCCGGAACCT 4241150 32 100.0 34 ................................ CCTCACATACTCAGCGAAACCATTATATCACATA 4241084 32 100.0 35 ................................ AATTTGGATTGAAAATAAGAAAAAAGCAGATGAAG 4241017 32 100.0 34 ................................ TATGTCTGCTAGTTTTCAAGATTCTAATTGGAAA 4240951 32 100.0 33 ................................ TAAAGTAGAATATGAAAAGTTGTTGGAGTATAA 4240886 32 100.0 34 ................................ TAAAGCAATCGGTTGCTGTGCCTTTGTGGATAAT 4240820 32 100.0 34 ................................ TTTTTGCCTTTTTGCTGGTTAAAACGGCCAAAGG 4240754 32 100.0 34 ................................ ATTAAATTGAAGGTGGTGTGCATAATGAAATTCC 4240688 32 100.0 34 ................................ CGGATGTTAGATAAAGAGCACCAAAAAGAAGCCA 4240622 32 100.0 33 ................................ ATAATAAAAATGATAATAGAAAAGAATTTTTAA 4240557 32 100.0 35 ................................ CTCCTTAAAATTAATTGAAAAGGAGCCTAACTATT 4240490 32 100.0 35 ................................ TTTTACCATGTGGTCGTACAGTTTGGCTTTTAACC 4240423 32 100.0 36 ................................ TCCGGCAAGCCATGCAATCACCCGGGCCTCAATGGC 4240355 32 100.0 34 ................................ TCTTTGGAAGAAAACTAGGCCAACACAGATACGG 4240289 32 100.0 35 ................................ ATTACATTAAATGAAAATAATAAAATAGTTAACGT 4240222 32 100.0 34 ................................ ATCAAAAAGATCACTCCTTAATTAGTTAGTTGAT 4240156 32 100.0 34 ................................ ATCTATACCAGTATCTTCGGCGAATTCTTTTATG 4240090 32 100.0 34 ................................ TACTGGTATACTCGGCTAGTTCCAATGTCGGATA 4240024 32 100.0 35 ................................ ACTTAGTTGTTCTGACACCTGTATTTCCTCTATAA 4239957 32 100.0 34 ................................ ACAATCTACAACAAATGAAAGAGTTGCGCGTTGC 4239891 32 100.0 35 ................................ TTCCATACGTTCAGACTTGGCGGTACCTGCGGCAC 4239824 32 100.0 35 ................................ CGTAAAAGTAATCTCCCGGCGTTAGAGCTATTCCG 4239757 32 100.0 34 ................................ TTGTAATCCCATACCTTTCTTGTACATATAGTCG 4239691 32 100.0 33 ................................ TAAAATAAACTCGGACAGATACTCTTTGCCTAC 4239626 32 100.0 35 ................................ ATACACACCCCGCTTGACTCGCTGGTTCCAATATC 4239559 32 100.0 36 ................................ CATAGTAGGAGGGAAGAACATTCCCCAGGTGTCACC 4239491 32 100.0 34 ................................ TTTACTCATTTAAAACACCTCAATCTAAAGCATA 4239425 32 100.0 36 ................................ ACCTTCACCAGGACCGCTGATCGCGCTCAGGTAGAA 4239357 32 100.0 34 ................................ GTAATTGTCCGCATCTGGATTAAAGTATTGAGGT 4239291 32 100.0 34 ................................ TGGCCCATCTGGCATTGTCTGAAGCCCATCGCCG 4239225 32 100.0 34 ................................ AAACCGGGTGGGTTTAAAGGTGAGGCGGTACAGT 4239159 32 100.0 37 ................................ AAGATAGTAAATCGTCTAACATCTCCTGAAGCGCCAT 4239090 32 100.0 35 ................................ CCTTTGTTGTGGCCGATCAGAATACGGACCCGGTC 4239023 32 100.0 35 ................................ ACGGGCACAGCAGCACAGTTTGAACTATGGTCAGA 4238956 32 100.0 34 ................................ ATATAACAAAACAAAAGGAGGATGAATCTATGTT 4238890 32 100.0 35 ................................ ATGAACCTGGAGGTGATCCTGTGGGTGGTACAACG 4238823 32 100.0 33 ................................ GTGTATCAAGCTAGACACCCGTATTTCCTGTAG 4238758 32 100.0 33 ................................ AGGTGATCAGTTTACAAAAGACTTTATTTATGC 4238693 32 100.0 34 ................................ ACATTCTAAAAAGCCGATGTACTGGCTCCGACTC 4238627 32 100.0 35 ................................ CTGCAATGCCAGCGTAGTCTTGCCTGACTTCGCCC 4238560 32 100.0 34 ................................ AACCTGCACCATCGCTTTACCGTCCGCTATTGAT 4238494 32 100.0 35 ................................ GAGATAACTTTCCGCTGTGAACCCTTTGCATACGG 4238427 32 100.0 34 ................................ CTTATCCGCCTTGAAGCGGCCATAAACAGCCAGC 4238361 32 100.0 34 ................................ TGATGGGTCAAAAGGCAAAAAAAGAAACAGATAC 4238295 32 100.0 35 ................................ CCATCTCCATGAACAAGGCCCCGATCCGTGTTGGC 4238228 32 100.0 34 ................................ CAACTATGCACATACTGACCGACCAATAGGGCAG 4238162 32 100.0 35 ................................ GAGCTCAGAAAAGAACTCGTCCATGTTCATGCCAT 4238095 32 100.0 34 ................................ GCACTATAAACCCTGCAGCCAGCAATCTATGTCC 4238029 32 100.0 35 ................................ ATTTTTGCAGCAAAATATTTTTGCTGGACAGGCAA 4237962 32 100.0 33 ................................ ATTTAGCGAATACGGGAACGATCACGCCAACGC 4237897 32 100.0 34 ................................ TCAAAAATAGGCTTCTTATCCGGGTCTGGGTAAG 4237831 32 100.0 35 ................................ ACCTTCCTTTCCGCCCGCCACCCGGCGCTTGCAGT 4237764 32 100.0 33 ................................ GCCCTGCTCGATGAGATACAAGTATAGTGCCCA 4237699 32 100.0 35 ................................ TGTCAGGATGAAAAAGAACAGGAGGAGGTGAAACC 4237632 32 100.0 34 ................................ CAGATATGCAAACACTTGGCGTTTTACGCCCAAT 4237566 32 100.0 36 ................................ ACGAATTATGTGGGCTGCATAAGCAAGCTATTGAAA 4237498 32 100.0 35 ................................ TTACTCTCGATAATCACAGTATTTCCCTCCATTTC 4237431 32 100.0 35 ................................ ATTGATTTAACAGGTCAGCAATTTGGCCGGCTGAC 4237364 32 100.0 35 ................................ GTCATCAACCCAGATCCGGAACGGCCATGGGTGGG 4237297 32 100.0 34 ................................ GACAGGGAATTCAAACCCGGCGAAACCGTTGACC 4237231 32 100.0 33 ................................ CTTTTTCCCTTCCAGCATATACACAGCCAGTGG 4237166 32 100.0 34 ................................ CCAGTCCCCATATCCATGAAGAGCCCGCCGATGC 4237100 32 100.0 34 ................................ TCTGCCATATCAAAAACCAATTCAACAAAATAAC 4237034 32 100.0 33 ................................ CACTATAAACCCTGCAGCCAGCAATCTATGTCC 4236969 32 100.0 33 ................................ GATAAAATTTCATCTTCACCGCCGATAATTTCC 4236904 32 96.9 34 A............................... CCATTCCGTCAGTCGACACATAATCTCCATAAAT 4236838 32 100.0 35 ................................ CAAATACGTTGCTCCGATTGCGGGCGCATTGGGCT 4236771 32 100.0 34 ................................ CTGCTCCCGCCGCTGCAGCTCGGCTATGATTTGT 4236705 32 100.0 34 ................................ AATCTCGCTTGGGCTTGGGTTCCGAAAAGCGATA 4236639 32 100.0 33 ................................ TAATCTCAGCCCCCACTGCATCACAAACGCATT 4236574 32 100.0 35 ................................ CAATACCCGCAGACAATCTGCTGCAAATGGCTAAA 4236507 32 100.0 34 ................................ ATTTAAACAAAGCTTTAATCGTGCGTCCGAGGTT 4236441 32 100.0 35 ................................ ATCTATTTTCATCTTTTACTTTCCCCCTCACCGTT 4236374 32 100.0 34 ................................ CCCACTGGCTTTTAGTTGATTGATTGCATCCAAT 4236308 32 100.0 34 ................................ TTGATTTCCTTTACATCTTCGCGCATGTCCTCAA 4236242 32 100.0 37 ................................ ATGTTTGACTTAACCAATAAGCATAAGCCAAACACTT 4236173 32 100.0 34 ................................ GCCTATTCCTCATGGCCATACTATTATCCACAAT 4236107 32 100.0 35 ................................ TCAACTTGTGACTTTGTTGGTCGTACAATACTAGG 4236040 32 100.0 34 ................................ AACATAAATCATAATACACAAGAGAAATTTACCC 4235974 32 100.0 34 ................................ ACTGCCACCGCCATGCCGTCCATATAAGCTGTCG 4235908 32 100.0 36 ................................ AACAGATTGGCAGTAGCATGAGAGCGATTGATGAAA 4235840 32 100.0 35 ................................ TCCGCGATTGAAGCGCGAGTTGTTGCCTGGTTCGC 4235773 32 100.0 34 ................................ ACTAGAAATATTACTAAGCATTCTAGTTTGTATT 4235707 32 100.0 34 ................................ CTATAAAAAAGATTTATCCCGGCGTTGTGCTGTC 4235641 32 100.0 34 ................................ ATCGTCGGCCCCCTTTCCTAATTGATATCGATCC 4235575 32 100.0 34 ................................ CAGCTGTTCAACGAACATGTTTTTAAAGGCGAAC 4235509 32 100.0 35 ................................ TGCATTGAACGGATCAACGATGCCCGGAGCCGGTG 4235442 32 100.0 34 ................................ TAATTAATTAAAAGGAGAGATGTCTTACATGGCT 4235376 32 100.0 36 ................................ CTCAATGCCCCGCAGCCTGCGCGGAGAGGATACCGC 4235308 32 100.0 34 ................................ CCCCACAGGTGGCTCGATCTAAAAGGTACTGGTA 4235242 32 100.0 35 ................................ TCTGATGCCTTTGCACGTACCATATCAGTAAATGT 4235175 32 100.0 35 ................................ TTTGATGTCACCGACGCCAATGGCGCTTATAATTT 4235108 32 100.0 34 ................................ ATAGCTATGAACTGACAAAAGCCGCTGCACATTC 4235042 32 100.0 35 ................................ ATTTCCTGCAATAGATTTGTGGCCGCATCCTCGGC 4234975 32 100.0 34 ................................ CACACAAGCGCATCACCTCGTGGGTACGTAACTT 4234909 32 100.0 35 ................................ GGTATCGGGGTTGATGTCGGCAAGGATAATATTAC 4234842 32 100.0 35 ................................ ACTTCTGCGAGGAACCCCTGGACGTGTTCGGTTAT 4234775 32 100.0 35 ................................ TTTCCGCTTAAAGTTCTCCAAGACTGCGCCCTCAG 4234708 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 109 32 100.0 34 GTCGCCCCCCGCGCGGGGGCGTGGATTGAAAC # Left flank : TAGGTACCCTCCGTTTGTTTGGAAATAAGGGGGAGTTTAAGTTGATGGTATTGGTCACTTATGACGTGAGCACTACTACTGAAGCCGGGAAAAAAAGGTTGCGTCACGTAGCCAAGCAGTGTGTTAATTATGGCCAGCGGGTGCAAAACTCGGTATTTGAATGTCTACTGGATCCAGCGCAGTTTGCAGCATTAAAAAATAAGCTTGAAGGTATTATTAACAAGGATGAAGATAGCCTGAGATATTATTTTTTAGGGAGCAACTGGAAAAGAAGAGTTGAACACGTTGGGGCCAGACAAACATTTGACCCCGAGGGGACAATCATTGTTTAAGTGCGAACCATAAGCGAACATAAAAAGTCTGGAGTTATCGCAGAGGTTTATTTGTAATGGTTTAAGCGGGTTTTGCTGTTAAAATGTAGACAAAAAATAAGCTAAACATGTAATGTTCGCGAAATTAAGGTTATAAACCCTTGTGTGGCAAGGGTTTATAATGGAAGC # Right flank : TATTCCCCTTTTGGCCTTTACTATATGTATAAGTGCATGAGGAATTGAAACAGGTAATATATATTATATTACCGTATTAATACGGTTTGGCCTTACCGTGATTTTATTGTATCACACGTTCTGAGTGTCCATAAAATCGCGGTAAGGCCAAACCTTGATTATACCTATTGCCAGTATTATTGAAATGGCAACCATATTGCTCATCTAAGCGATGGAACAACAAGGCGACAATTTGTTCAAAAGTTTGCTAGTTTTGCAGTGCTTTCTTGAGTTCCAATATACTGTATCATGGATAATCTAGTTATTTCTACTACGTCATTCGCATTGAAGCCATTTTTCAAAGCAATTTTTGCAATCTCAACTTTACCTTTAAGTTTGCCTTCGATCCTGCCTCTAATAAGGCCTGCCTCTTCATCTCACCAGCGTCCGCTCAATATTGGTGATCATATTTTCCACATCCTGGGGTTTGGTTTCATCCAGTACACGTTCACTTTCAAGGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //