Array 1 121084-119896 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACZER010000009.1 Escherichia coli strain 71CH scaffold_8, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    121083	    29	 100.0	    32	.............................	CCGATAAAATGCAAAAAACGCGGCGTTTTTTG	
    121022	    29	 100.0	    32	.............................	GGGGTATGAGGGCGCGATCGTGGTACAGGAGG	
    120961	    29	 100.0	    32	.............................	CGTAGCGCCGCAGAGCATTTACGCGAGTTATT	
    120900	    29	 100.0	    32	.............................	GAGCAACAAAACAATGAATCCAACGGATTGCC	
    120839	    29	 100.0	    32	.............................	AACAAGCTCGCCCGGCCCGTCCTCATCAAGGG	
    120778	    29	 100.0	    32	.............................	CCACTGCACTGACTCTCGTGCGTACGCTGCGG	
    120717	    29	 100.0	    32	.............................	GCTGGCAACTGAATGCCCGCCGTATTGCCTTT	
    120656	    29	 100.0	    32	.............................	CAAAGGCCCGCCAATGCGGGCCGATTTATCCC	
    120595	    29	 100.0	    32	.............................	CCGGACGAGAAATTCACGTTCCTGCATTTCAT	
    120534	    29	 100.0	    32	.............................	CCCTCCAGTACTGTGATGCGATCTTTAAGTCC	
    120473	    29	 100.0	    32	.............................	ACTGGTTCTGTAACCCAAATTTGGGATCATTC	
    120412	    29	 100.0	    32	.............................	ACGAAACGCAGTACGGTTTTGTCAGTTAACAC	
    120351	    29	 100.0	    32	.............................	GCGGACGGCAAAACAATCGGGAGTCTGGACAA	
    120290	    29	 100.0	    32	.............................	ACTATCGGCGCTGTTCAGTTGGGACAGAAACA	
    120229	    29	 100.0	    32	.............................	TTATCGCACCGTGTTAAACCGGCAGAAAAACA	
    120168	    29	 100.0	    32	.............................	CGTGCCTTCGACTTTGCGGATCACGTCGTCTT	
    120107	    29	 100.0	    32	.............................	ACGGGGACGAATCACAGCAGCGTTATCGTGAT	
    120046	    29	 100.0	    32	.............................	AAACCGGACGAGGGCGCGCTAAAACGTGATTA	
    119985	    29	 100.0	    32	.............................	CCTCTCAATTTGTAACGTCTGCAATGTCAGGC	
    119924	    29	  96.6	     0	............................A	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  99.8	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA
# Right flank :  CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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