Array 1 653786-654076 **** Predicted by CRISPRDetect 2.4 *** >NZ_CEKW01000003.1 Paeniclostridium sordellii strain R31809, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ========================================= ================== 653786 26 80.8 38 T....G..T.............AA.. ATGTTTAAATAAATTGAAAATGGTAGTGTGTAAATAGA AT,A [653796,653806] 653853 26 100.0 39 .......................... AATGTTACATTTCCCGTAAATTAAACAAGTCCATTTATT 653918 26 100.0 40 .......................... AAGGAAAATTGTCAATGGACTACTTAAGAATGCGGATAAA 653984 26 100.0 41 .......................... AAGGTATTTGAGGTTTATATTGAGAACCATAAGAATTTATT 654051 26 92.3 0 ......................A.A. | ========== ====== ====== ====== ========================== ========================================= ================== 5 26 94.6 40 GTTATTAAAGAACTATATTGTATTTA # Left flank : GATATGAAACTGGAGGAGCTAAGTTTGAAGCTGGTAGACATACACATAAGACAAGTTCAGGAATTGGAGTTGTAAGAGGTACTGCATATCAAGAATTACTTTGTGATGTTAATTTAATAATACATATTACACATAAGGATTATGATGTAATAGATCATATTTATAAATCTTTTACAACTGATATGCAAAAAACGATGACACTTGGAAGAAATAAAGATATATGCAATTTACTTGATGTTAAGTTAGTAGATATTAATAATTCTAAAGATAAATCAACTGTATTGAAACATAATGCATTTATAGTTAATGATGCTTTTGAAAGCAAAAAAGTTAATTGCACTAGATTTAGGTTAAATACTTTTTACTCATATAATGAAATTTCTAAAAAAGATAAGATAAGGGAATTTGAAAAAGCAATAGCTGGATTTGTATCTAAAGATACTAAAGTTAGACTTAAAAAAAATTATAACTTAGTAGATTCAGAAAACTTAAATGTATAT # Right flank : AGTAATTGGTAGTTAATTTATATATTAAAAAATAATATGATTTTAAGAAAGGGATATAGCTGTTAAGATGGATATGTTTTATGCGAAAGGAAATAAGGAAACAATAGAAGAACACACATATAAAGTGCTTGAACAATTAAATAGAGTAATAGATCTATATAAAGCAAATATAAAATATCATGAGCTAATGAGATTAGCAGTTAAATATCACGATGCAGGTAAAGTAATGCTATCATTTCAAAAGAAATTAAATAACGAGCATTTTAAAAATGTTGAATTTATAAAGCATAAAGATTATATAAAACATAATCATTTATCAAGCTACTTTGTTTTAAATGAAGAGGTTAAAGATCTAGATTATGATGAACTAAGAATGTTATATCAAATTATATATTACCACCATCAGCAAAAGAATATCATATTTATAAAAAACTTAGATGGAGTAGAAGAAATAATAGACTATATTTCAGAAAATATATTACCTAATTATGACTTTAATT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAAAGAACTATATTGTATTTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:84.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 656347-657285 **** Predicted by CRISPRDetect 2.4 *** >NZ_CEKW01000003.1 Paeniclostridium sordellii strain R31809, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 656347 29 100.0 37 ............................. ACATATTGACATAACTCTCTTATTGTTGGGGGATACC 656413 29 100.0 36 ............................. TAAAGTTTATTGGCGAGGACAACAAGTTTCGAACTT 656478 29 100.0 37 ............................. AAGGGTTAACTGCTTTAACGGCTTTAACTGGATCTCA 656544 29 100.0 37 ............................. TATTCCATCAAACTCATAATCCTTTTTATCTATAATC 656610 29 100.0 37 ............................. ATTAGAGAAATAGAAATATATCCTAGTTTCTTAAAAA 656676 29 100.0 37 ............................. AGGTTTTGAGTTTGAATAAGTGTATCACTTACTTTTG 656742 29 100.0 37 ............................. GTAGCAAAAGTCATTATAAGTCTAGTTTGAACTTTGT 656808 29 100.0 38 ............................. TGATAGAATGTTTGAGTCATTGCTAAACTACGCATAGT 656875 29 100.0 37 ............................. TTTTAAATATAAAAATATAAATCTAGGAGAATTTTAA 656941 29 93.1 36 .G..........................A TAAAAAAATTGTATCAAAGTTTATGTTGTAGATAAT 657006 29 96.6 35 ...................A......... TAAGTGATTTAATCACTTTCGTGAACTCTTTTATT 657070 29 86.2 37 ............TC...C.....A..... TTCTCTTCTACAATATGGATACTCTATATTAGTTGCT 657136 29 96.6 27 A............................ AAAATTCGGCTGTGAGTGAGAAAGTAC Deletion [657192] 657192 29 93.1 35 .........T.............A..... CAAGGAAAAAATACTATGGATGAAGTAAATGATTA 657256 28 75.9 0 .........T-....A...AA..A....T | AA [657275] ========== ====== ====== ====== ============================= ====================================== ================== 15 29 96.1 36 GTTATTAAAGAACTATATTGTATGTAAAG # Left flank : GTAAAATACATATATAGTGTAGAGAATTTAAAAAAACATAATTCTGAGTATTTGCAAGAAATCAGAAATACTATAAATAATATAAGATTACTAAATGAAAGTGACATTAAAGCAAAAGATATAAAGGTTAGAGAACTTGATACTGTAACTATTATACCAAGAATTTTAGGAACTGAATATAATAGGGAGAATACTATAGTTATTAGACGAGATATTTTGAATAAGTTATTAAAAACTAAAGAAATTAGTTATGATAGCACTAACAATTGTTATTTTATGGATGTTAAATATGATTTTGAACATGGTCTTTATTTAGATTAGAATATATAAATATGTGTATTTGCAGTGACCTAGTTTTATAATTAAATGGTGTTAATGTATTGAAAATACTACGATATAATTAGGTTTAATATAAAAGTGAGAAAACACTATTGAAGGTTCACTGCAAATTACAATAAAATAATGTATGTAAGTATTGAAAATACTTACATACACTTGGG # Right flank : TGAATGTAGATACTAAAATGGGTTTAATAAAATATAGTTATATAATTATAGTCCAAATTTAAAATACTACAAAAATAACAAAATAAGAAATAATATATAAAAATATACGGAATAATAGTTGATATATAATAAGAAAACCTAGGAGGAACATAATGAAAATTCAATATGTACAAGGTAAACCATTATTTACAACTATAAATAAGAATAAAAAACAATATCCATATTTAACAGACGATATAGAAACTGATATATGTATAATAGGTGGTGGAGTTACAGGAGCCATAGCATCGTATTATTTTAGTAAACAAAATATTAAAACAGTTATACTAGAGAAAAAAAGAATAGCACATTTAAGCACAAGTGTAACTACATCTCTTTTACAATATGAACTAGATGATAATTTATCAGATCTTCAAGAATATACAAGATTAGAAAATTCATTAAAAGCTTATAATCTTGGACTTAGGGCACTTGATGAAATTGAAGAGTTTGTAAATACA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAAAGAACTATATTGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //