Array 1 325132-329632 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFTG010000004.1 Clostridium estertheticum strain CF004 contig00004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 325132 30 100.0 36 .............................. CTATAAGGAGAGACAACCTTTGCAATTGTTTCTCCA 325198 30 100.0 35 .............................. CTGCGTGATGGGTTTCAGATTGCTCTTCCAGTATT 325263 30 100.0 37 .............................. CTATACTCGCCTGGTCTAAATTTATCTATTGTTACAC 325330 30 100.0 37 .............................. AAAAATATCAAGATTTAACGCTCACAAAGACGTTGAT 325397 30 100.0 35 .............................. TACTTTTACCCCCTCTTATTTTCCCAAGTACATAA 325462 30 100.0 35 .............................. ATTAAGGCTCGAACAACTGGAAGGGTTAAGAGAAG 325527 30 100.0 36 .............................. TAAATAGATTGCCAATTATCTGAGTCATCAGTAAGC 325593 30 100.0 34 .............................. TATATTTACTAAGATTTATAACATCAACACTTTT 325657 30 100.0 36 .............................. AGATTATAGTAGAGAACAGGTAATGAAAAACTTAGG 325723 30 100.0 35 .............................. CCTAACATTCTAAAAATATTTAAACACTTATGATA 325788 30 100.0 36 .............................. CTAATATCCATATCGCTTTTCTTGGCTAATTTTTTA 325854 30 100.0 36 .............................. ATATTGTAGTCGGATGAATAGTTACTACTAAATTAG 325920 30 100.0 36 .............................. ACTTTATCATAATCTACTGTCATTCCAGGATGTATG 325986 30 100.0 36 .............................. TATTGTAGAAGTATCCTTATTAAGTTTTTTAGCTAC 326052 30 100.0 35 .............................. TACTTTTCAAAAAAGATATCTTTGTAAAACTTAAA 326117 30 100.0 36 .............................. TAAAATCGGGCATCCAGCTTTCGTAATCAGTCAAAG 326183 30 100.0 36 .............................. CTATAATTTGATAATTCTTTTACTATTGCACTAGCT 326249 30 100.0 35 .............................. GACGGTGCAAATAACATTAAGATTGCAAGACCAAG 326314 30 100.0 37 .............................. AACTAAAAAATAAAGTTATTACCTTATATGTGTTTTA 326381 30 100.0 35 .............................. ATAATATTTTCATATGTTTCAATACTTCTAAGATT 326446 30 100.0 35 .............................. CTTATTGTCATATACGCACCGACTGCTTTTGCGGT 326511 30 100.0 35 .............................. TACGCTTAGAAAAACATACGCATTTAATATACAAA 326576 30 100.0 36 .............................. TTATGGAGCAAATGAAAAGTATTTGTATTTATATAA 326642 30 100.0 36 .............................. AGAAATGGAAATGCAAGAAGATGTAAAAACACGTGG 326708 30 100.0 37 .............................. GTATGTTCCAAAACCATTATTTTGATCGTGGTGCGTA 326775 30 100.0 37 .............................. CAACCAACAGACGTATTTAATACACAATCAGCACAAA 326842 30 100.0 37 .............................. GTTTTAGGAACAGTTACAGTACCATCATCAATAGCAG 326909 30 100.0 35 .............................. GATGCAAGTATGAATGGTAATGGCATAGATATACG 326974 30 100.0 36 .............................. TTGCCACTACCATTAATAGTGTGATAAGTAACATAA 327040 30 100.0 36 .............................. AAAAATTGAAAGTTTAGGAACTGAAACTACAACAAC 327106 30 100.0 34 .............................. AAGTATGTTGCTAATATTGTATGATCCATTATTA 327170 30 100.0 35 .............................. GGTGTAGGATCAGTTATTCTTGAAATACTTTGGGT 327235 30 100.0 35 .............................. CAATGCTTGCAGAAACTAAAGTACAGTATATACCT 327300 30 100.0 36 .............................. ATTTTAATTACAGATATACTTTCATCATCATTGGAA 327366 30 100.0 38 .............................. CAGAGGATTTTGAATCTTATTATAATTGTAGAGCTAAA 327434 30 100.0 34 .............................. ATAAAATGATCTACATCATTTAAGTTGTTTGCAA 327498 30 100.0 38 .............................. TAAAAGATAGCTTAGAGGTAACAAGGATATGTAATGAT 327566 30 100.0 36 .............................. AGGATTTCTCCCTGATGTTTAATTATTTTAATCCCA 327632 30 100.0 37 .............................. CCATCTAGTTAGTTCTCAGATGATTCTATTTTTATAG 327699 30 100.0 36 .............................. TCATCATTAACCTCTAAGTACATTGGATCATCATAC 327765 30 100.0 37 .............................. ATTTGAGAAGTTATAACTTTTAACATAACAGCTTTTA 327832 30 100.0 35 .............................. ATAGATAAATATATTAAAACTTCTATTGTCGATAG 327897 30 100.0 36 .............................. ATTTGTTTCTCAAACATTTTATAAGTTATAGTATTT 327963 30 100.0 36 .............................. ATTTCGTAATGTAGATGGTAGTATACGTACTAATTG 328029 30 100.0 35 .............................. AAATAAATTATTGCTTCATTTATAATTGCTAATGT 328094 30 100.0 37 .............................. ATGGGTGGAGATGGAGGTTCTCATTGTGTTTTAGATT 328161 30 100.0 37 .............................. AGCAATGCTTCTTCTTCAACAAATTCTCGCATCTTTG 328228 30 100.0 36 .............................. TATCAAAACGATATCCAGTATTTATCAGATTGCCAG 328294 30 100.0 35 .............................. AGCGTATCATATCGTTTATAAGTATCGTCGCTTGC 328359 30 100.0 35 .............................. AATAATCTTCGTATAGGAATAAATCTATCTTTTGG 328424 30 100.0 36 .............................. AAAGGGGGATATTCACTTGCAGTTGCACAAGAATTT 328490 30 100.0 36 .............................. CCTTTACCAACTACTCTTATTGCAAATTGTTTACCG 328556 30 100.0 35 .............................. CTGTAAAAGCATAAAAAGGATATATGAAAATTTCC 328621 30 100.0 36 .............................. ATAGGTAAAGAGGTGAGAGAATGAGCAAAAGTATAG 328687 30 100.0 34 .............................. CTAATAGTTTGTACTGTCCTTGTATAACTTGTAG 328751 30 100.0 36 .............................. AAAACATATTCAACATTAATACTAATAATCTTTAAA 328817 30 100.0 36 .............................. AGTACAAACTCATTATCATAATGTAAAATAATATTT 328883 30 100.0 36 .............................. TAGTCAGCACCAATTGTTGTAGTCGTATCATCATGT 328949 30 100.0 34 .............................. AAATGTTCCATAACCTTAAGATCATACTTTGAAT 329013 30 100.0 35 .............................. TTACGATTTGTGTTGCATTTTTCTTCTTGGTATTT 329078 30 96.7 36 .......A...................... GCATCTGATAACTTTGTTCTAGCTTTCATGGCATTT 329144 30 100.0 35 .............................. TCTTGTATTACAGCTATTCGCCATAAGGGTAAAGT 329209 30 100.0 36 .............................. ATATCATTCAAGCTTGTAGTTTTTAATAAATTTAAA 329275 30 100.0 36 .............................. AGTACTTGATATGATGTACCATTGTTGCAGTCTCTA 329341 30 100.0 36 .............................. AAGTATTAACCTCATTTATTAAATATATAGGCAAAC 329407 30 96.7 34 ..............G............... TTTTCAGTGTAGTAAAAATACTCCAGGGTAAAGT 329471 30 100.0 36 .............................. CCTTTTAGAATTTCAATTCTTTTTAGAGCTTTTTCA 329537 30 100.0 36 .............................. CACTTTAGAATTAGATTTAACAACCCAACAAACTGC 329603 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 69 30 99.9 36 GCTGAACCTTAACATTAGATGTATTTAAAT # Left flank : AGCCCATTTAGTTTAAAGGGGATGAGGTAATATGGGGAAATCTATAAATTATAATTATGCTTTTGTTTTTTATGACATAAAAGAAAAACGAGTAAACCGTGTATTTAAAGTTTGTAAAAAATATTTTAAACATCATCAAAAATCTGTTTTTAGAGGTGAAATAACGACATCAAATTTAATAAAGTTACGTGCTGACTTAAAAAAAGTAATAGATGAAACAGAAGATTTTATTTCGATTATAAAAGTAATGAATGAACAAAGTTTCGGAGAGGAGACCATTGGAGTGAATTTTAAAGATAGCGAAGCATTAATCTTATAACAGGTTTTTACCAACCTATTTTTAGTTTTAAAAGCTGAAAGCCAGTGAAAAACAAAGGTTGCACATACTTATTAAATAAAGATATAATAAGAGATGAAACAGCTGGTAAAAAAACATATAAACCAGTCAATACAATGGATTATGAGCTTTCCACTTTAATAACAATGGCTAGTTTATATTG # Right flank : TAGCGGAGTACTGTTGAAGAGAGTTATATTTATTTGTGGTGGATTTTGAAGGGCACGATTCATCTCCACCAGTGAAACTCTGGACAGTAATGTCGATGATTTTGTTATGATTTAGCATAAAGAGAGTGGTTTGATTTCTAATTCATTATATAGCGCAATTGCTAGAGACTTTGGTGTTATTATTTTACACAAAAGGATTATAAGAAGGTGTGTAGCATTTAGCAGAAATTACATACAAGCAAAATGAGTTTTCTATGGATAGACATAAAGCGATATATAAACTTAAAACAGGAGGATTAAATGTTATATTCTCTGTGGATATGTTTAATGAAGGACTAGATATTCCTCAAATTGATATGATTTTACTATTAAGGCCAACTGAATCCCCAACTATTTTTCTTCAACAATTAGGACGTGGGTTAAGAAAATATAAGGACAAGAAGTATGTAAATGTATTAGATTTTATAGGCAATTATAAAAAAGCTAACTTAATTCCATTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACCTTAACATTAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //