Array 1 31787-32414 **** Predicted by CRISPRDetect 2.4 *** >NZ_OVCV01000037.1 Pseudomonas aeruginosa strain KCRI-321A isolate R0008_321A, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 31787 28 100.0 32 ............................ TGGGGCGAAACCCCTAGGCGCCGGGCTAGCTC 31847 28 100.0 32 ............................ TCCTCAAGTTTTGTCAGCCGAGCCAGCATTTC 31907 28 100.0 32 ............................ TCGATGCCCCGGCGAACCGGGGCGGGGTGGTT 31967 28 100.0 32 ............................ TGATTGCTGCGGCACCTGAACTGCTCTCCATT 32027 28 100.0 32 ............................ TGTCCTTTCAACTCGGTCTGCTCGTAGAGGTT 32087 28 100.0 32 ............................ TTGAGAAGCCGCGGGTGTCTAAGAAACTGGTA 32147 28 100.0 32 ............................ AAGACGTGGCAGGCGGCCTACAACCACGACGA 32207 28 100.0 32 ............................ TGACTGCGGGGCTGCACGACATAGTCGTCGAC 32267 28 100.0 32 ............................ GTATGAAGTGTGTTACCGCGTGGGCGATTCCT 32327 28 100.0 32 ............................ TCGTAGTGGCCCCACGTCGGCGGTAGCTCGCC 32387 28 96.4 0 ...........A................ | ========== ====== ====== ====== ============================ ================================ ================== 11 28 99.7 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTAGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : ACTCGAACCCACCTCGGCCACAACAGCCACCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTACCAAACATCCGAATATAAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 42107-40939 **** Predicted by CRISPRDetect 2.4 *** >NZ_OVCV01000037.1 Pseudomonas aeruginosa strain KCRI-321A isolate R0008_321A, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 42106 28 100.0 32 ............................ TGTCAGAAGGGATTACCGCGGACCTGGTCGCA 42046 28 100.0 32 ............................ TCAGGCTCATTTCGTTGTCCTCGATGCCCCGG 41986 28 100.0 32 ............................ GGGAGGGCATGTGATGCGAGCAGACGAGTACC 41926 28 100.0 32 ............................ GGGCCCGACGGCTAGTAATTCGCGGAGGATGG 41866 28 100.0 32 ............................ TGTCCGCAGCAGGCCGGTAATCCGGATAACTG 41806 28 100.0 32 ............................ TGTCCGACAACCCGCATAGCATCCCTGAGCAA 41746 28 100.0 32 ............................ AAGGACTCTGATCTCTTGACTCACCATTTCCT 41686 28 100.0 32 ............................ CGCTGCCATCCGGCGCATTTCCCTCTCATAGC 41626 28 100.0 32 ............................ AACATCCAGCCCGAGCTGAGCGATATCCCCCG 41566 28 100.0 32 ............................ TGCTCGCTGATGACCAGCCGCAGCGCATGGTT 41506 28 96.4 32 .......................G.... CGCAAAGCCCCGCAGGACAATGACTTGATATC 41446 28 100.0 32 ............................ AATCCGAGGCGGAGTTCAGCCACTTGGCATAG 41386 28 96.4 32 .....................C...... GCAGTGATCGAGCGCGCACGGTCGCGCAAGAC 41326 28 100.0 32 ............................ AGAAGCGCATCCAGCGATACGAAGATGCACTC 41266 28 100.0 32 ............................ AACCAGCGTGTCGATGCCGAAGCGAAGGCCCG 41206 28 100.0 32 ............................ AGTGAGCACGATCATCATGTCGGCCTGCTGGC 41146 28 100.0 32 ............................ ATCACCGGAGGCCACGGATTCGCTGTAGCTCA 41086 28 100.0 32 ............................ ACCAGCTGCTGCGAGTGCTGGTTCGCGCTGGC 41026 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA 40966 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 20 28 98.2 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAGAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : CGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGAACTTCGTTGCGGACATGCCGATGAGGTGCTGACGGGGTTCTTCAGAACCAGGGAACGGAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGGCGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCCG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //