Array 1 48076-42430 **** Predicted by CRISPRDetect 2.4 *** >NZ_QDDJ01000008.1 Ornithinimicrobium cavernae strain KCTC 49018 s.30183_Contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 48075 28 100.0 33 ............................ CCGAGCGCCATGGTCCCGTTGGCCGAGGGGTTG 48014 28 100.0 33 ............................ CCCACAGGCCGGCGTCCGTGAGCCCATCGGTCA 47953 28 100.0 33 ............................ TCGGAGACGTCGCAGCCAGGAGGGCACGACGGG 47892 28 100.0 33 ............................ CAGCCACGCACGCACGGCGGCGGCGTCGGTCGC 47831 28 100.0 33 ............................ CTTGAACGGGATCTGCTGCCCGTGGTGGGTGTG 47770 28 100.0 33 ............................ CCCGCACTCACGGAGTATCCGGTCCGTGAAGTA 47709 28 100.0 33 ............................ CAGTGACGGCCCGCCCCAGGACCCGGACGCGGT 47648 28 100.0 33 ............................ GTCGGTCCACGCGATGTTGCCCTTCGCGCGGAG 47587 28 100.0 33 ............................ TGGGTTCAGCATGGGATCTCACCAGCGCGGAGC 47526 28 100.0 33 ............................ CATCTACCCACTGACCGACGCCGTGTTCCCATC 47465 28 100.0 33 ............................ CCGCGGAGGAGGTTTCCGAGGACGCCTGCGACA 47404 28 100.0 33 ............................ CTCGTTCGTCTCCAGGAAGGTGAAGGCGAAGGT 47343 28 100.0 33 ............................ CGACCCGATGCTCGGATTCACACTCATGACCGA 47282 28 100.0 33 ............................ GTCGTCCTTCGTCTCGACCCACTCGGCGATCAG 47221 28 100.0 33 ............................ CTGTCCGGCGCCGGGACCGTCCCCGACGGCGGC 47160 28 100.0 33 ............................ CAGAGGCTGGCCTTGTGGATCGAGTAGGCGTGC 47099 28 100.0 33 ............................ TGCTTCGTCGCCGCCGGTCGGCTCACCGGCATA 47038 28 100.0 33 ............................ CTGGAGCCGTGTCATCTCCGGGGCGCTCGCCAC 46977 28 100.0 33 ............................ CATGACCGCCGGCACCCTCACGCCTGCCAACGC 46916 28 100.0 33 ............................ CCATGGCGACACGTACTCGCCGCCGTCGGGGAC 46855 28 100.0 33 ............................ GCGGACCGTGGAGCCGTGTGCTGACTGCAGCCA 46794 28 100.0 33 ............................ CGGCGCGGCCAGATCGAGCCGGCCGTAGCGGTA 46733 28 100.0 33 ............................ CACCGACGCCCGCGGCGACAACAGGTTGGTGAC 46672 28 100.0 33 ............................ GAGCCCCCCGGTTGCACGGCAGCACACACGCCC 46611 28 100.0 33 ............................ GGGTGGCGCGACGGCGGTCGATAAGGATCCGAC 46550 28 100.0 33 ............................ CGCTGACCGCACCTGGATCGGGCCGAATAGTTA 46489 28 100.0 33 ............................ CTCGTGGGCGAGGGTGCCCTCGTCGAAGACATC 46428 28 100.0 33 ............................ CGTGCCGGTGGTCGCGGCTGCATCAGCGGCGGA 46367 28 100.0 33 ............................ CATGTTCGGGGAGATATACCTGGCCGCCAGGGC 46306 28 100.0 33 ............................ TGGACACCCACCGCGCTGTGTGGGTGTGGAGAG 46245 28 100.0 33 ............................ TCTTCTCCCGGCGTTCATCGGTGGCGCCGCTGC 46184 28 100.0 33 ............................ CATCTGCAGCTCGGCCTCGTCGCGGGCGTACTC 46123 28 100.0 33 ............................ CAGTCACATCACATTGCTGCCGGAGGTCTAGCG 46062 28 100.0 33 ............................ GGATGGCGAGCGCATCCGCGTCCCTGCCGAGGA 46001 28 100.0 33 ............................ CGTTGACGAGGCGTGCTGGTAGCCGCGGGTGAC 45940 28 100.0 33 ............................ GAGGCCCTGGACCGTCGCGAGGAGTTGCAGGGG 45879 28 100.0 33 ............................ CCAGGCGCCGGCGTACCCGCCGGTGGAGTTGAT 45818 28 100.0 33 ............................ GTCGCTGCGAGTGTCCTGCCCGAACAGCGCACC 45757 28 100.0 33 ............................ TGGCGGCGGGGTCCAGGTCGCCGACGAGGCCGT 45696 28 100.0 33 ............................ CCTCACCGGCAAGGACACATGGAAGCAGTACCC 45635 28 100.0 33 ............................ GTCGCCTACGAGCGCGCCGAGCACTACGGCATC 45574 28 100.0 33 ............................ CATCTCGTCGGCCTGGTCGGCCTTGCGTCGGAG 45513 28 100.0 33 ............................ CGGATCCTCGGCGTGGCCCTTGAAGCGCCACCC 45452 28 100.0 33 ............................ GGTCCAGCCGACCGCCTGGTGGGCGCGGATCAC 45391 28 100.0 33 ............................ GTTCAATGTCGGGGCAGACAGCAGGTGCATGTA 45330 28 100.0 33 ............................ CAGCACGACCGTGACGCCGCCGAGGATGAGGCC 45269 28 100.0 33 ............................ CGACCGGACGCAGGAGAGCGCGCGCTGCCGGGA 45208 28 100.0 33 ............................ CATCGGTGTCGTCTGTCCGGTCGGCTCCGGTGT 45147 28 100.0 33 ............................ GTTCGACCCCTTCCTCGAAGTCGTAAGAGGTCT 45086 28 100.0 33 ............................ CAGATCGCAGCAGCCAGACAGCGAGCACGAGAG 45025 28 100.0 33 ............................ CCCCGAGGCTGAGACGCCCGGGCTGATCCCGAC 44964 28 100.0 33 ............................ GTAGACCGGCGCCCCGAATCCGTCGTAATAGGT 44903 28 100.0 33 ............................ GGCAGGCGCACCCGGCGCGTGACGCTCGGCACG 44842 28 100.0 33 ............................ CATCTGCAGCTCGGCAGCGTCGCGGGCGTAGTC 44781 28 100.0 33 ............................ CGGATCTTCTCCTCTGCTGCGATCGCGGCGCGG 44720 28 100.0 33 ............................ GGCACCATGATCTACGCCTTGCACCGCATCGGC 44659 28 100.0 33 ............................ CTCGCGGAACGCCAGCTGCGGGCGACCGAACAG 44598 28 100.0 33 ............................ CGCCTTGCACCGCTTCACAACGGAGGTGATCAG 44537 28 100.0 33 ............................ CAGGTGCTGATCCGGAGTGGGTCTGCCGAACGT 44476 28 100.0 33 ............................ CTCACCGTTGAGGGTGGAGATCTTCTCCGCGGC 44415 28 100.0 33 ............................ GTCGGCGCTGATCCTCGCTCAGCTTCTGCGCCT 44354 28 100.0 34 ............................ CCTGCTGCTCCGCAACGTCCCGAACACTCCCCCG 44292 28 100.0 34 ............................ GGCATCGCCCATGTACATCGCATTGAGGCGGATT 44230 28 100.0 33 ............................ CCGTCACCCGGTCCACCTCGACCAGCGAGGCGT 44169 28 100.0 34 ............................ CCACGCGGCCCATGCCGCCAGTGGCAGCCGGAGA 44107 28 100.0 33 ............................ CACCTGATCCGAGAAACAGACGAGGAGGACTGA 44046 28 100.0 33 ............................ GTCCTGCGTCATGCTGCGTTCGCGGAGGAGCTT 43985 28 100.0 33 ............................ GTCATCACTCAGAAGATGGTCACGACGGCGGAC 43924 28 100.0 33 ............................ CATGAACATCGACCTGGACGAGGAGATCGAGGC 43863 28 100.0 33 ............................ GTTGTTGCCCAGCCCGACGACCGCTGCGCCGAT 43802 28 100.0 33 ............................ CACCCGCAACACGGCCAAGACCAGCGACAGAAC 43741 28 100.0 33 ............................ GGGCTCGGGTACTGGGTGCCGTTTGAGTCGATC 43680 28 100.0 33 ............................ CTGGCTCCACCAACTCCGCAAGCGGGACGTGCG 43619 28 100.0 33 ............................ CCGGCATCGTGGTTTTCGTCGGTCCGAACGGGT 43558 28 100.0 33 ............................ CTGCGCCACCGTCCCAGCCGGGCCAGTCGTCTG 43497 28 100.0 33 ............................ CGGGTCGGCCGTGGCCCCCTGCACGCCGAGCAG 43436 28 100.0 33 ............................ GCCCTACACAGCCAAGGACGGAACCACCACCTG 43375 28 100.0 34 ............................ CCTCGAAGGAGCGACCATCCAGGAGCCGGACGGA 43313 28 100.0 33 ............................ GACGGCGTCGACACCGCCGATGGACTGCTCCAG 43252 28 100.0 33 ............................ CGTCGAGTCGCGGTCTGCCAGGGGCGAGATGGC 43191 28 100.0 33 ............................ CCCGCTGCCGCCGACCATGGTGATGTCGTAGTA 43130 28 100.0 34 ............................ GTGGTGCGACACGGTCCTGTGGATGCAGGCGAGT 43068 28 100.0 33 ............................ CTGCCCGCCCGACGACGTGCAGGTCGGACAGCG 43007 28 96.4 33 ......T..................... CGGTCGCAGGCCAGCAGCGCTGTCTCCGTCGGC 42946 28 96.4 33 ..G......................... CGACGACACCGCCCGCACGGGTGCGTTCGCGAC 42885 28 100.0 33 ............................ CTCGGCAGCGGACATGCCAGCGACCCGCGCGAA 42824 28 100.0 33 ............................ GGCATCCCGCCGGGCACCGGTGCGGCAGTGGTG 42763 28 100.0 33 ............................ GCGCCAGAGCCAGGATGACGCGGGTGAGAATCT 42702 28 100.0 33 ............................ GTCGGGGATGCGCCGCACCTGCACCCGCCCCGT 42641 28 100.0 33 ............................ CATCACCGTCCACCAGGGCAACGGCGAAACCCT 42580 28 96.4 32 ........................G... CTGCGTCCCGCTCACAGCGCATGTAATAGCAG 42520 28 96.4 35 ..T......................... GTGCGTGGCGGTGGCTCACCGGCCGAGGCGCGCAC 42457 28 71.4 0 .....T..AC.......A.T.G...A.T | ========== ====== ====== ====== ============================ =================================== ================== 93 28 99.5 33 GTCCGCCCCGCGCGAGCGGGGATGAGCC # Left flank : GACTGGGACGTGATCTATCTCTGGGACGGCAGCGCCGGCCGCGTTGCCGGGGGGACCGACTATGCCGCCGAAGTAGACGTGCCGTGGTGATGCTCGTCCTCACGGCCTGCCCCGCGGGTCTGAGAGGGCATCTGACCAGGTGGCTGCTGGAGATTAGCGCCGGCGTCTTCGTCGGCAGGGTCAGCGCGCGCGTTCGGGCCGAACTGTGGCAGCGCGTCACTGAGCTAGCCAAGGATGGGCGAGCCGTCATGGTGTTCCAGGACGACACAGAACAAGGATTCAGCTTCCAGGTCAACAAGCACCACTGGAGCGTGGTGGACCACGATGGGCTCACACTCATGCTGCGGCCAAGCGCTGCGGACTCACCGGAGGGGCATGACGCGGGTGCTCCACGGAAAGGGTGGAGCAAGGCGTCGAGGCGCAGACGCCGTTGACCTGAGTCCGGCTCTGGAGTGATTGCGGTTGCACCTCCCTCCGCGTAACGTCCCAGGTCACGAAGT # Right flank : GTCCTACGCCATCGCCAAGGCGCCGGCCGAGGCTCGCGGTCTCTAGGGGCATTCTCGTTCCAGCCACCGCGCGACGGTAATGGCATCCACAGCCGTTTCAGCTTCGGCCAGCTGCTTGTTCATGCTTGTCACAAGGGCCGCGGCTGCAGCTTCAGCTCCGTGCTCATCGGCTAGTGAACAGACCTGTTCTTCATCCTCCGGGCTGAGGTTTCCCCACCACGACATCACTGCGGTGTCGGCCCACCATGCGTCACTGCCGACCTCTTCAACGCTCCCGTTAAGCGTGACATCTGCGTCGTCGGAGGGTGGCTCTCCACCATATTGGGCTGGATTACTGGTGCTCTCCTTGGCGGCGGCCTCGGGGAGTTTGCATCAGGAGAGGTGGGCTGACCACTCCTTTGTGGCGCTTCCGTGACCGCGCTGCCGCACCCCGAAAGCGCTAGTCCCGCAGTACTGCTGCAGTGACTGCCCATCGCTTCATCGCTCCAGTCTCCTTCTGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGCGAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //