Array 1 504736-511880 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072385.1 Arachnia propionica strain F0714 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 504736 36 100.0 38 .................................... AGCAGCTTCCGCACCCGATACGGGTGCAGACCCGGCAG 504810 36 100.0 36 .................................... CTGATTCTCTGGTTCGGGAGTCGCCCCCTCTGTCGT 504882 36 100.0 37 .................................... GGCCACTTCACCTTGCCGGCATCCGCATCAACGACAG 504955 36 100.0 37 .................................... ACATCTTTGAGGCCGCTGCGGAGGTGCCCGCTGCCAG 505028 36 100.0 37 .................................... TTGCAGTCTCTGCATGTCCAAGTCATGGTAACTATCC 505101 36 100.0 39 .................................... GACATACCCCACATCCAGGCACTGAATGGCCTGATGGAC 505176 36 100.0 37 .................................... AGCATTCAAAGCGTGACAAGATGCATCTGTTTATCAC 505249 36 100.0 35 .................................... TGGAGGATATGATTCTCTATACCATTGATGACTCG 505320 36 100.0 36 .................................... TTGGAGATTCTCACGGAAACCCGGGAGAAAATGCAG 505392 36 100.0 38 .................................... ATCTTTTCGCGCACGTCTGCAAAACACTTCAGATTCAT 505466 36 100.0 39 .................................... CCGTAACATTGTCGCTCGTGAACAGCACCGCATTCGCGA 505541 36 100.0 34 .................................... ATACTGTCGCGCCTGTTGCGTGACGGTTGGGTGT 505611 36 100.0 38 .................................... CAAACCAGCGCCACTTCTGCCGTATGTGCCACCCCGGA 505685 36 100.0 38 .................................... TTGAAGACATCAGGAGAGCGAGACACCACCATAGTTAT 505759 36 100.0 36 .................................... ATCCACAAGAATGGCCTGAGCGTTCGGGATGTTGAG 505831 36 100.0 37 .................................... TTCATGGCGTTGACCATTGCCACAATGGCCGGCACAG 505904 36 100.0 37 .................................... AACAAGACTTTCGATCAGCGGGGCAATGTCTTTTTCT 505977 36 100.0 36 .................................... AGGAACTCGCGCTTCTTGTTTGACTTTTCTTTAACT 506049 36 100.0 36 .................................... CAGCTGCGGTTTCGAGTTCCCGCCAACGGGCACCGA 506121 36 100.0 36 .................................... TCCAGCAGGAAGTGGTTGTAGCCATCATTCAGCCAG 506193 36 100.0 37 .................................... TGCTTCTTGTAGATCCAGGTCGGGTAAGTCTCGCGCT 506266 36 100.0 36 .................................... ACGAAGATCCAGGTGCCCGACGTCACCGCCCCTACC 506338 36 100.0 38 .................................... TGCTGGGACGCGTCAATGCCCATCATGGCCTGTTGGAA 506412 36 100.0 36 .................................... CACGTACTCCCTGAAACAATCCCTGGTCACCCCCTC 506484 36 100.0 40 .................................... ACAGCCTGGTCGCGGGCCTGGGGCACCCGGACCCGACCTA 506560 36 100.0 40 .................................... CAGTAGTGTGACTGTTCCTTCGTTTGTCAGGAAGTCTGGG 506636 36 100.0 39 .................................... GTGAAGCGTTTGAACGCTGCCAGGGAGTCGGAGCCGATC 506711 36 100.0 37 .................................... ATTCTTCAGAGCATCCATGACGGTGACGAAGTGATCC 506784 36 100.0 38 .................................... ATGTAGTCTCGCCCTTTCACATACCCACCAGTACCAGT 506858 36 100.0 38 .................................... CGTGAAGCCCCCGCCGGGGCCCGCGACACACTCGGCGG 506932 36 100.0 37 .................................... GCTGGTGGCGCCGGCACCGTCCTTCCGCTTCAGCTGG 507005 36 100.0 40 .................................... AAGACGGCCTTCTAGGGCCAATGAAGTGAGCCCGCCCCAA 507081 36 100.0 42 .................................... GAGGGACGGATCCGTCCCCATAGGGGTGCTCATCCCAGTACC 507159 36 100.0 37 .................................... GCGGAAAACGCCCACAAGCTGGGATCAGTGTATTCTT 507232 36 100.0 36 .................................... ACAACCTGGCCTTTGACGGGGACTTCATACTGTCAC 507304 36 100.0 36 .................................... ATCTGCATGTCCAGAGTGCCGATCACATTGTCATAG 507376 36 100.0 39 .................................... GCGGTCACACCGGCAGCGTATGCCTGATCGGTCCGCCCC 507451 36 100.0 37 .................................... CTGTTTCTCGAGTTAGGCTGTGGCATATCAGCAAGAG 507524 36 100.0 37 .................................... AGCATAGTTGTCTGCCATTGTTACCTGTCCTTCTAGT 507597 36 100.0 37 .................................... GATCTTCTTGTAGGCCTCGGTGACCAATTCCGGGTCC 507670 36 100.0 37 .................................... GAATATGAGACCACACAGGGTTTCTCCCTATCCATTG 507743 36 100.0 37 .................................... TTTCATGAACACTTTCCTTACGCCAAGCTCGGTGGCC 507816 36 100.0 39 .................................... TTCTCGGGGCCTGCGGTAGGCCGGCCGAGGAACCGACAG 507891 36 100.0 40 .................................... ACGCAAGCCGGGTACGGCACGGAGTTGCGGGTTGTGGCCG 507967 36 100.0 36 .................................... CGGAACCTACCCGGCCAGATATGGCAGGCCCTCTCC 508039 36 100.0 37 .................................... ACATGTACGGGAATCCAACAGAATTCCTCACCAATCC 508112 36 100.0 36 .................................... TGCGGGCTGGGGCGCTACAGGGGCATGGGCGCGATA 508184 36 100.0 36 .................................... CGGGTGCAGGTGTGTACAGGGCTACCCGGACAACGT 508256 36 100.0 37 .................................... CCCGCGGCTGTTTTGATGAGCCGTAGAACCAACGCTT 508329 36 100.0 35 .................................... ATCGAGGGCGGTTGCCTCGAGGTCGCGGCACCAGC 508400 36 100.0 39 .................................... CCGGTCGGCTGGTCGCGGCCCTGGGATGAGTTCGGCGTG 508475 36 100.0 38 .................................... GACCCGCCCGGCATTGACGCGGCAGGCAACAGCAAGAT 508549 36 100.0 37 .................................... AAGCATCAAAGCTATGGCCTTGGCCCCAATCAACAGG 508622 36 100.0 36 .................................... GTGTGGTGGTCCTTCACTTCCCATGACAAATTCAAC 508694 36 100.0 37 .................................... TTGGTTGCTTTCTGCATTTAATATCTCCTGATCAGAT 508767 36 100.0 37 .................................... CCCTGCTTGTCCGGGTAGCAGGACAGAGTAACAGGCC 508840 36 100.0 35 .................................... ACTATTCCGCGACGGACCAGCAGTACATCGAGGGC 508911 36 100.0 37 .................................... TGCACATCCGCCCCTCTTTCGAGCAGGGGGCCTCCAT 508984 36 100.0 39 .................................... GGTGCGGTGGATGCCGAGCAGGTTGGCAACGTCGGGGGT 509059 36 100.0 38 .................................... AAGAGCCTTACGAATCTCTTTCTGCTGTTCCTTGTATT 509133 36 97.2 37 ........................G........... ACCCAAATCGGGCCGGGCCACTCCGACGGTTCGCCCA 509206 36 100.0 35 .................................... GTTCCTCGGAGCGAAAAACATCGTGGTGGAAGGTA 509277 36 100.0 36 .................................... GAACCCAAGCAGCTCGGGCGGGATGCTCACTTCGGC 509349 36 100.0 39 .................................... ATCGCTGTCGCCCGTGCCCTCGGGCTCGGCCTGGACCGG 509424 36 97.2 35 ............................G....... AATGTTGCTGAAAAGCTTCAGGGCGATTTTGAGGC 509495 36 100.0 36 .................................... GCCTCGATGAGGCCGACGTAGATGTCCTCGATCTTG 509567 36 100.0 38 .................................... ATCGTTGTTTGCCACGATTCACCTTTCCGACAGCGGCC 509641 36 100.0 37 .................................... TATCGTGCGCAACTCATTTTTGTAACGCCTCAGATAA 509714 36 100.0 35 .................................... CCGCCGGCATAACTCATGGGAGGTTTCATGTCTCC 509785 36 100.0 38 .................................... AATGGGATCCCCGGGGTTTGTAGCCCAAAGCCATACCG 509859 36 100.0 37 .................................... ATGGCTTGGATGGGCCATTTCGCGATTCCCTCGCCGA 509932 36 100.0 37 .................................... CAGCGACCCGTCGGGACGGTCTCTACCGGATGGAGGC 510005 36 97.2 37 ...............T.................... TTGATAACGCGAGTCAAAGATCTGCGTACTGCTGGGT 510078 36 100.0 36 .................................... CTTTGTCTAGCATGACTAGATCCGCAGCAGCCCCGA 510150 36 100.0 36 .................................... TCGCCAGAAACTGTTGCGTTCTCGAGAAGTCGCCGC 510222 36 100.0 39 .................................... GCTTGTGGTGCACTGTGGTGGGCACCCGCAACAGCTGGC 510297 36 97.2 40 .....................A.............. CCGAGCAGCCCGGCACGATCCCCCGAGTCGAAACCTCCCC 510373 36 100.0 37 .................................... TCGCATCCCCGAGTCGATCAGCCAGGAGGCCGCGTAT 510446 36 97.2 38 ..........C......................... TCACGTTGTCGGGGAGCCGTACCGTCAGGTACTGGCCG 510520 36 97.2 37 ..........C......................... GGGGATCTTGCCTTCGATCTTCGGCACGATCTTGATC 510593 36 100.0 37 .................................... AAGCCCGGTGAGACAAGTCATATCCTGGTCAGACTCA 510666 36 100.0 39 .................................... TTGTCGTCTCGGAGCCCGAGCCATTGGGCGACACGCGGG 510741 36 100.0 37 .................................... AAGCCCGGTGAGACAAGTCATATCCTGGTCAGACTCA 510814 36 100.0 39 .................................... TTGTCGTCTCGGAGCCCGAGCCATTGGGCGACACGCGGG 510889 36 100.0 38 .................................... GGGAGGGTCTCATCAAGCGTCGTCGGTGCGGAAGTCTC 510963 36 94.4 41 ..........C....T.................... CTCAGGCGGTAGGCGCGATTCTCTCTCAGATTTTTCCACAG 511040 36 91.7 36 ..........C....T..............C..... TTTTTACCAGGAGTTTTAGGGGGGGTAAAACTGACA 511112 36 94.4 37 ..........C....T.................... CAGTTCAAGGTCCAGCGTCTAACCCCTCCATTGGCGT 511185 36 94.4 38 ..........C....T.................... CCACGCCCCCGCGATAGCATCGTTGAACCAGCGCAAAG 511259 36 94.4 36 ..........C....T.................... CTCGGAGGCGTACCGGCCCCGGCTGAATCGCATCAT 511331 36 94.4 36 ..........C....T.................... ATCTCGTGCAGATATTTGACCTCAATGCTGCCGGAA 511403 36 91.7 39 ..........C....T...T................ TCATTGAGCGACATCACGTCGTGCCCGACGATCGAGTTC 511478 36 94.4 35 ..........C....T.................... AACAACCAGAGCATCTCAACCTGGGCATCAGTGAG 511549 36 91.7 37 ..........C....T..........C......... GGAGCGCCGCACGGCCACCGTGACGTGACCGTCGTGG 511622 36 88.9 38 ..........C.A..T..........C......... AAATCTCGCTCAAAATGGTTCTGGGTACGCAACAAGGC 511696 36 88.9 37 ..........C.A..T..........C......... AATTCGTGTCTCAAACGCGGCAGCAGATTGGGATCAA 511769 36 97.2 40 ...............T.................... GGGACGCCGTTTTGTTTCTTTCCAAGAAACATTTTTCCTC 511845 36 83.3 0 ..........C....TG..T......C.......G. | ========== ====== ====== ====== ==================================== ========================================== ================== 98 36 98.8 37 ATTGTTCCGGTCTTCCAGGCCGGACTTCATTGAGAC # Left flank : GGGAGAACTGGATTCCTACACCCCATTGATGACGAGGTGACCCATGGCCCGACGAAGATATCTCATTTCCTATGACATATCGGATCCCAAGCGGCTGCGAGCCACCTTCAACCTCATGAAGGGCTACGGGAAGTGGCTCCAGTACTCGGTGTTCGTGTGTGACCTGAGCAAGGCTGAACTCGCAATGTGGGAACGGGACATTCGTGATGTGATCGCACTCGCCTACGACTCGGTGGTGGTGATCGACCTCGGCGCCCCGCAAGACGCAGACATCCGTATGCTTGGGGTACCGCGTAGGTTGCCCGATGAGGGGCCCGTGGTGGTGTGAGCCGCTGCGAGACCTCCGGTCATGTCGTCTCCCCTAGGGAGCGCTCGAAGGGGTTTGACTAGGTGTTTTACCCCATGACAACTCAACAGAGTGGTTTTATAGGACCCGGCGGTGCGGAGAGCTCGCAGGTGCTGGTAAAGTTCCTAGCCAAGGCGGCCTTCTGAGGCGAGCC # Right flank : CCATCAGGTCAGGTTCAGTGCTTGTTTCCGCGCCGCGGGCTGTTTCGGCTTTCTGAGGTGGATTCCGTCGATAAGCTGAAGCGAAGCTGTCGTGGCTTCTTGATTACTGTCAAGGTGGGCATTCTTTGGGAGAGCAGTGTCGCCTACCCTTTTGTGCACTAATCGCCGGGGAAACCAGAACGGCGGTCTTGCTCCGTCGGCGGTTTCCCCGGCGATTCTTATGCGAAATATGAAATCTTGTTCGCGGGTGTGGGTGAAAGTGATCCCCCTGATGTTTTTCTACAGGCTGCTCATCGACGGTTGACGCCCTTGGTTAGGCGGGCTTGAGGATGGGCATGAACAAATTTCGTGAAATCTCTCGCGATGGGATCGCGACCTGCTGGCCCTGTTCGTCTTACGCGTGCAGGTGCTCCTTGTGCTTTTCTGCCACCTTTTCCGACTCCAGTTGCAGGGTGCAGTGCTCGATGCGGATTTCGTGATGTTTGATCAGGCACTCCTGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTTCCGGTCTTCCAGGCCGGACTTCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 2819517-2817957 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072385.1 Arachnia propionica strain F0714 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 2819516 36 97.2 37 ...................................C CCTTCCAACCCGGCGCCGTCCTCGAGGCCGCCCACCT 2819443 36 97.2 37 ...............................G.... ATTGACGCGATTCGGTACGGTCAATCGGGGTAGCGTG 2819370 36 100.0 36 .................................... TGATTTCGCATCGCGTTGAGTGAGGGCCTCCAGCAG 2819298 36 100.0 37 .................................... GTCCGACCATTCAATCCGTATCCACCGCCTAGAAACC 2819225 36 100.0 36 .................................... CATCATCGGGGAACTCGACCTGGTCAAAGTCGACGG 2819153 36 100.0 33 .................................... TACTCGGCTACCCCCGAGCGCCGAAAGGCCCGC 2819084 36 100.0 37 .................................... TTGAGCTGTTGCGGGAATGGACTCGTGGCTGTTACGC 2819011 36 100.0 35 .................................... GCCTACTCCCGCCCCCTGCGGTACCTGCTCAACTA 2818940 36 100.0 35 .................................... AAGGCGGGGGCCGCGAGGGAGCGGTGGTCGAGCCC 2818869 36 100.0 39 .................................... AGGTAATGACAATGTGGAAACAGGCCTGAACTGGATTCT 2818794 36 97.2 37 ..........G......................... CACATCGCCTGTCCAAACTTCCGCCGGAAGGGGCTCC 2818721 36 100.0 39 .................................... GGCGGGCCATCACCGCACTCCAAGAAAGGAACACCGCAT 2818646 36 100.0 36 .................................... CCGACGGGTCGCTGGAAGGTAGGGCGGGTCGAGGTA 2818574 36 97.2 37 ................G................... GGAAGGAAATGGGCACCACCCTGCCCGGGCAGCTCGA 2818501 36 100.0 36 .................................... GGTGTTGTCGGTCGGCAACTGGTACTTGCCGACGAT 2818429 36 100.0 39 .................................... GCAGCACCATGGTTCACCGCCGGGCGGAGGGGCCCACTG 2818354 36 100.0 38 .................................... GTTCCTCGGTGCTGCCATGACTCTCATCATCCTTCCCA 2818280 36 100.0 35 .................................... GTGGAGGCTGAAACGATGAAGGAGGTGGGTCTGAA 2818209 36 100.0 37 .................................... CCACGCCCCATTGTATCTCACCCCAAGGAGTCCCCAT 2818136 36 100.0 36 .................................... GGCGCACGTCAGGATCTCGCCGGGAACCAGTAGCAG 2818064 36 100.0 36 .................................... CTCCGGCCTGTGGTCCCGCTGGGCCAGCGTGGACTT 2817992 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 22 36 99.5 37 GTCGCAATGGAGCCTGACCTTTGAGGTCAGGAAAAG # Left flank : TGCCGGCCATCTTCCTTCCCTCGTCGTCCCGGGGAACGGCAGCGGAAGAGGTCGTGTAGCCCAACGCAGCCTGCAACCAGGGCTGCGATGTGTCGGCCAGCCCAGCCCGATCGCTTTCGGCATGCGATCCGGTGCCGTGGTGGGGCGAGAGACACGGGAGGTGTGGCCCCGCCACCGTCGTCATCGTGCGACGCGGGCTCAGCTGTGTATTTTGCTCCGCCGTGACCCGGCGAGATCACCCTGACCGGCGGGTCTTGGTGCTTCCAGGAGCGTTGCGCAGTGCCCCGTCTGTTCATCGAAGTCAGGATGCGATTCTGACGAACCAAGACCGCTTATCAAACAAACATAGCGGCAATTGAGAACGGTCAAGATCGACAGGATGGATTCATGATGGAACCTTCAAGAATCTGTGTATGGATGACGTGGGGAAGTATGTAGAACCTGATCTTTGAGATCAGGAAAATCGCGACCCATAGTTTCGTGCCGTACCCCGCTTATTT # Right flank : GCTCGCGATTTCTTTGGTCTCTGACTACTAGTGGCGTGGCGTTGAGGTGAGTTTACGTTTGCGGTTGATTTTGGCGAGGATTTCGTCTGGGGTTTTGGTCCAGATGAACGGGTGTTTCCGGTTGTTCCAGCTGTTGATGAATTCGCGGATCTTGCCGATCAACTCGCGGACTGAGACGAAGGTACCGCGTCGGATGGCCTGGCGTTCGATGATGCCGAACCAGACCTCGACCAGGTTCAACCATGACCCCGACGTCGGGGTGAAGTGGACCTTGATGCGTGGGTTTGCTGTAAGCCAGTTGCGGACCTCGACTCGCTTGTGCGCGGCGTAGTTGTCCATCACCAGGTGTAGTTCCTGTTCCGGGTAGGCACGGGCCACATGCTTGAGGAAACCGAGGAACTCTTGGTGGCGGTGCCGGTCCTTGCAGAGCCCGGTCACCTTCCCGGTGGCGATTTCCAGGGCGGCGAACAAGGTGGTGGTGCCATGGCGGACGTAGTCGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATGGAGCCTGACCTTTGAGGTCAGGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //