Array 1 112131-111202 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JABGOL010000003.1 Pseudomonas aeruginosa strain 5627 scaffold_2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    112130	    28	  96.4	    32	.............C..............	CGCAACAAGCATGGAGAACAGCATCAATTCGC 	
    112070	    28	  96.4	    32	.............C..............	TCGGCCCGTCCAGAACGTCACACGCTCGCCAT 	
    112010	    28	  96.4	    32	.............C..............	TTTGTCTCGATGATCATTTTGACGCGGCGCTC 	
    111950	    28	  96.4	    32	.............C..............	ATCACGGCCACCCGAACACGTCGCCCAGGAAC 	
    111890	    28	  96.4	    32	.............C..............	AGTGCCACCACCCGTTCCGCCGCCATCACCAT 	
    111830	    28	  96.4	    32	.............C..............	GAAGAACACGCTGGCCGGTGAGTTCTCCGGGC 	
    111770	    28	  96.4	    33	.............C..............	ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC	
    111709	    28	  96.4	    32	.............C..............	TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 	
    111649	    28	 100.0	    32	............................	AGCGTGCCATGGCGGCGGTAAGTCAAACCGTT 	
    111589	    28	 100.0	    32	............................	TGGTCGAACAGATGGCGGTCCTCGGCCAACTG 	
    111529	    28	 100.0	    32	............................	ACGTCGGAACGCAACTACCTGACCGCGTTGGT 	
    111469	    28	 100.0	    32	............................	ATCAGGTACAGCACCAGGGCACCGAAGACGTT 	
    111409	    28	 100.0	    32	............................	CGCAACGTTCGTGATCTGCCGTTCGCCGCCCA 	
    111349	    28	 100.0	    32	............................	ATCGACCACGACAGTGCTTCCCTGGTCTATTC 	
    111289	    28	 100.0	    32	............................	ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 	
    111229	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
        16	    28	  98.2	    32	GTTCACTGCCGTATAGGCAGCTAAGAAA	                                 	       

# Left flank :   CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCACTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATCACAAGACCTTTCGCGCTCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA
# Right flank :  CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCCGGACAGCCGGCGGATAACCGCAAGC

# Questionable array : NO	 Score: 6.00
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTATAGGCAGCTAAGAAA
# Alternate repeat :   GTTCACTGCCGTACAGGCAGCTAAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.14   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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