Array 1 4488-4984 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NUXA01000064.1 Bacillus thuringiensis strain AFS081620 AFS081620_109_H9_Contig64_140523, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      4488	    36	  94.4	    30	.......T............T...............	GACGGCGGAACGATAGTCATTGCACATTCT	
      4554	    36	 100.0	    30	....................................	CGGTTTCAACTCCTTTTAAGGCATTTCTCA	
      4620	    36	  97.2	    30	................G...................	CTCTTAACGAATCCAGTAGCAGCAGAACAT	
      4686	    36	 100.0	    30	....................................	GTTGATAGTCGTATTAGACAGATCGTAGAA	
      4752	    36	 100.0	    29	....................................	CCAATCCATCATGCATGGGTGGTAGTTGA 	
      4817	    36	  97.2	    30	................G...................	CCTAACATATTTAAATGTAGTTTCATGTTG	
      4883	    36	 100.0	    30	....................................	GTTAATACATACTCTTAATCCTTATAATTC	
      4949	    36	  91.7	     0	................GC..............C...	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  97.6	    30	ACCATAGCATAGCGATATTTCTTATGGAACTATAGC	                              	       

# Left flank :   CCTAGCTTTACTTTTTTGTTTAGTCTTTTTCCCAATGATCTAATCCAAATTGTCCCCTCAAAAAATAAAATAATTAAAGCTAGAACAACTGTATCGAAAAAAGAGGTATTACTACCCTCACTCACAGGATATTTTAAAGGTGTTCATAGTGGAACTGCTGGGATTACTGTTGAAACACACGATGGCAGTATTATAGCAAATGTAGGGTCAAAGCAATTACTATTATTTGAGAAATACCAAGTAGATGTACTTGGACATTATACAAAAATAAAGGAGGAAAAACGTATTGGGATGGCGATATAGAATGGTAACAAAAAGAGCGCAGCTTGCTAATATGGAATTTTCAATAGAGAAACATATGCAAACAAAGAAGATGCTATCTCTACTCAACTTACTTTATTTTAAAAAGAAAAAAATCACATTCTAAAAAAAGGAAATCCCTCCTTTTTCAAATTAAAAAACCTTGTCTAACCCTATAGTGACAAGGTTTTTTGACACCT
# Right flank :  CTCGCCGCCCATAAACAAGCTTATTTTTCTATCATTTTATATTAATATTATATATTACAATGCCTTATATATATTTTTAACAAAAATATATATCCCAAACCTAAAAGACTAAATATAACTTATAAATTTACTTATCAAATAGCCTCCAGCAAGGAAATTGTACACTTACTCTTACTTTAAAATCAGTAAGTTTTATTAGTACATTTACATAAATAATCCCTTCGCCTATACACAAAAGAATTATGTTATAATAACTACTGAACATATGAATAGGATAACAACTACCTGCTGTTGGCAAGTAGAAATTTATCTAATAAAAAGATCACCTGTTTCCAAGACAAGTGATCTTTTTGTATACATTTCCTGTATTTTTTTGAGATTCCATTTGCCAATACTACCCATAAAACTTTATAAAAAGTGTTCTCCTGCCACTAAAAACATGATTAACCAAAAACACACTATCATAAGACATACAGTCCTACATTTCCCTACAAAGGACT

# Questionable array : NO	 Score: 3.12
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ACCATAGCATAGCGATATTTCTTATGGAACTATAGC
# Alternate repeat :   ACCATAGCATAGCGATGTTTCTTATGGAACTATAGC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-2.80,-0.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [3-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.27   Confidence: MEDIUM] 

# Array family : NA
//