Array 1 254789-253965 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP024730.1 Prevotella intermedia strain KCOM 1933 chromosome 2, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    254788	    36	  94.4	    30	.......G.G..........................	TTAACACGTATCTATTCAATGTTAGTGTTG	
    254722	    36	 100.0	    29	....................................	GGGTTGTTTACTAAAACACCCAAAAAAAG 	
    254657	    36	 100.0	    30	....................................	GTGTGGTGCATAATCCATATAGCTATAACC	
    254591	    36	 100.0	    30	....................................	TTATGGTATGGCAGGAATTACACCTCGACG	
    254525	    36	 100.0	    29	....................................	TTCGGATAATAGAAGAATGGCTAGATGAA 	
    254460	    36	 100.0	    30	....................................	GTAAAGACTGCGAATATTGCAAACCAGTCA	
    254394	    36	 100.0	    30	....................................	TATATTTCGCTAAGCATTTTAATACAAAGG	
    254328	    36	  91.7	    30	..............T.......A.A...........	CATACGGGCTAAATTAATAAAAGCCCCCAT	
    254262	    36	  91.7	    29	..............T.......A.A...........	CTGAACAAGTAAGCCATATTGACTATATA 	
    254197	    36	  91.7	    30	..............T.......A.A...........	ACAATACATTCTGAGATGAAAAGAAAGGGG	
    254131	    36	  97.2	    29	..............T.....................	GATATAGATGTGATGCTGATTATGAACGT 	
    254066	    36	  97.2	    30	..............T.....................	GAAAACGTAGACGCAAACACAATTGACCTC	
    254000	    36	  91.7	     0	......C.......T..................C..	|                             	
==========	======	======	======	====================================	==============================	==================
        13	    36	  96.6	    30	GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	                              	       

# Left flank :   GATAACGATATGAGAAAACATCTTATCTTGCTCTGTACAGCGGCTTTCCTGTCGTCGTTGCACATCAACCGAAGCTAACACAACCGAACGAGCCGCCGCATCGAGCCGATGCAGAAGCCCCAACCACCCTTGCCAATGTCGCACTATCGGCAAAGCCGCCCTTGTGCTGCCGCCCGAACCCACGCCACAACCTCTACACTTTCCACGACGTAAAACCACTCCTGTTTTGTAAAGATAATTCCATAGAAAAACCATAATTTCGATTTTACATTCCAAAAGCGGCTCTTTTGCAACGCAAAAGAGCCGCTTTTACCGTGTAAAACCTACGCTTTCGCAATGCAAAACAATAGGTTTTACAATGCGCTGATAACGAGATAGTTACGCAATAGTTTCGCTTGTGAAAAATATTTACACCTTTCTCGCCTTTTTTCACCCATAGAAAGGCGTGTTCCCCCTTCCATTTTTACTTCCCCCAATTCCATTCCCTTGCTTGTTAATAA
# Right flank :  GCACCTAACCTAACTATCTGATTCTTATATGTTTTGTTCCTTTCTTTCCACCACCCATTTTACGCATTCTAACTATCGAATTGTAAATCTCGTTGTTTTAAATTTATATCTTTTCTGATTTGTATTGAGAGGCTCTGATGAATTTCTATCATTCTCTTTGCAAGCTTCTCATTCTTTATTTCTATCGTTTCGTCGGGCTTGTCCTTCGCAGTAAGCAACAGTCCATATACAAGACTTCTATATTCGAATATTAGTGGCATTACCTTTTTTGATAGAAATATGCCATTGCCCTTGTTGTATATCTCTTCGGTTAGCTCTTTTATAAACTTACGTATATTGGCTTGTCTGAAGTAATAAGTTTTCTCTCCACCGCCCTTAGGCTGCTCCCACACCAATATGCAGTCGTCGTTTTCCGTATCTGTAATAAACCTAAGCAATTTATAAATGCTTTGGTGCGCCTTCAGTACGGCTTCATACTTTGCACGCTCAATATTCTCAAA

# Questionable array : NO	 Score: 2.86
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC
# Alternate repeat :   GTTGTTTTTACCTTTCAAACAGAAAGCAGATGCAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.50,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.41   Confidence: LOW] 

# Array family : NA
//