Array 1 178466-180419 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHXO010000008.1 Roseateles terrae strain CECT 7247 Ga0372398_08, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 178466 32 100.0 34 ................................ AAGTCCCGACAGGAAGGCCTGGCCATGATGAGGC 178532 32 100.0 35 ................................ CGCAAGGATGCTCCAGGCGTCTTCCAGGTGCTTAC 178599 32 100.0 33 ................................ TGGCACCACGCCCGCAGGTTCGCCGGATCGCAG 178664 32 100.0 35 ................................ TCTGCCCTCCTCTTCCTCCTTCCTTCTCCTCTCCT 178731 32 100.0 34 ................................ GTCCAAATGCTGCCGGCCATGGTCGCCGCGTCAC 178797 32 100.0 34 ................................ AATGTAGATGTCGAGCACCCCCTCACCCTTGCAA 178863 32 100.0 36 ................................ GTCCTCTTCTTTCACCAGCGCGTTGAGGATGTGGAA 178931 32 100.0 34 ................................ ATCGCCTCGGTCCGCCAATTGCTGGCGACGTACA 178997 32 100.0 35 ................................ TGGAGCGTCTTGGGAGTCGTTTTCTGCAACTGACG 179064 32 100.0 32 ................................ TTGACGCTATTAGCAATCTCCGGGGGCGTTCC 179128 32 100.0 34 ................................ ATGGCTATAAACGCGGAGCTGCCAAGCATCAGGC 179194 32 100.0 36 ................................ AGCCTGGGGTGGCTGGCCAGGAAGTTCGAGGTCAGC 179262 32 100.0 34 ................................ TCGCGTGAGTACCTGTGCGACTTCTCGGCCGCAG 179328 32 100.0 34 ................................ ATTTCGACCGCGGCAAAAGAGGTCATCCGATGAG 179394 32 100.0 35 ................................ AGCGCCGACGCAGATCGATCCGCCCGCAGACAAGG 179461 32 100.0 32 ................................ TCGCCGAACTGGTCTTTGGGGTGGCGCTTCTT 179525 32 100.0 33 ................................ TTTCTAGAGGCGCAGGCACGGGCTACCCCGGCC 179590 32 96.9 34 ............G................... TCTCGCTCAATTGGCGCAACGGCACCAAGCGCGT 179656 32 100.0 34 ................................ TTTGATCCCCTGCGTGACCTGCTTGTGCGCCCCG 179722 32 100.0 34 ................................ ACCGTACAGCAGTTCTTCCGACGCAATCGGGTTT 179788 32 100.0 34 ................................ TGTGAGCGCAGGTGCGGCGGTGTAGAGCTTGGTG 179854 32 100.0 35 ................................ TCCGTCATGCGGGCGATGATTTCGTGAGTGCTGCC 179921 32 100.0 36 ................................ CTGCACGTCCGTGATGCGCTCGGCGACCTGCTGCTT 179989 32 100.0 36 ................................ ACTGGCACGCTCAACTACGGTGGCATTGAAGTTGGT 180057 32 100.0 34 ................................ TTTGCCAGGAGGGCGCGGGCTTCTGTCCACGCAT 180123 32 100.0 35 ................................ TCCACGTCGCCGATGGTGCCAGTCGATTCCGTCGT 180190 32 100.0 34 ................................ GAATTGCCGTGCACGGGGCCGACATCAAGCTCAC 180256 32 96.9 34 ........................A....... CCCTTTGATGCCGTGGGCGGCTTCGATGGCGCGA 180322 32 90.6 34 ............T..A.A.............. CGCTCCACCCAGGGAGGCGAGTGATGGAATAGGC 180388 32 90.6 0 ..........C.............A......T | ========== ====== ====== ====== ================================ ==================================== ================== 30 32 99.2 34 GTCGCGCCCTTCACGGGCGCGTGGGTTGAAAC # Left flank : CCATTCCTTTGGAAGTGAGGGATGTGAGGTGATGGTCTTGGTGAGCTATGACGTGAACACGCAGGACAAGGCTGGCGTGAGGAGGCTGCGCCAGATTTCGAAAGCGTGTTTGAACCTGGGGCAGCGGGTGCAGTTGTCAGTGTTTGAGATCGAACTCGAGCCAGCCCAGTGGGTGGCGCTGAAAGCGCGGCTGATCTCCATCATGGACCCCGCGACGGACAGTCTTCGTTTTTACTATCTCGGCAAGCGTTGGCAGAGCAAGGTGGAACACGCGGGAGCCAATGCGGCGCTTGATCTACACGCGCCCCTGATTTTGTAAGTGCAGCGCGAACCGGTATTGATTGGGAGTTGCGTGGGAGGTTCGCAGCGCGCTAAGGGCTTGCTGCCATTGGTGAAAAGCGTCAGAGAGGCTGGGCAGGCGCTGCAGGCACACGTTTGAAAGGAGGGTTCGCATTAGCGAATCCTTTTTTTTAACTGGGAGAATGGGTTACGAAGACGGG # Right flank : TCCTCTCCATGTTGGTCATGTCGCACCCTTCACCGCCGCAGGACACCGCAGCCGGTCATCGCGCACCGGCGCGTGTTCAGGCCAGGCGATGACCTCCCGTCAGCTCTCCACGCCCGTAATGTCCCGCTATGAGCCCCCGAGCCGGCCTGGGGTCTCAGCGAAGTCAACCCGACAAACCCCCGGGCCTGCAGCGTCCCACGCCGAATCCCGCGCCTTCATCACCCGGGCACCGCCCATCGGACAGGGGAGGGCCGATCCGCGCGCCGTAACAACTTTTTTTCTGCCCGCCATTTAAGTCCCCGCTCCCCCCAGTCGTCCTAAGCAGGTGAGGGCAGTTCACACCGCCCCTCACCAAACAAGCGCAAGACCACTCTTTAGGAGCGAACATCATGTTGAGCCTGCACACCAACGCCGCGGCCCTGTCGACCCAGAACTCGCTGAGCTCGACGCAGAAAAACCTCTCCACCTCGATGACCCGCCTGGGCACCGGCTATCGCGTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTTCACGGGCGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCTCTTCACGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //