Array 1 274-1 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AKBO01001221.1 Xanthomonas vasicola pv. vasculorum NCPPB 895 scf_9771_6267_contig_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	===============================	===================================	==================
       273	    22	  71.0	    34	---------......................	CAAGAAGGTAGTGCATCAGTACGTCTGGGTCGAT 	
       217	    31	 100.0	    35	...............................	ATCAGAAAACGCGCCGGAGTTGTTGCCCTCTTCGC	
       151	    31	 100.0	    33	...............................	GGTTCCTTCGATCAGCTCGCGGTGTGCATAACC  	
        87	    31	 100.0	    34	...............................	GGTCAGTGCGATCGCTTTGCGTGCCAGCTCGTGG 	
        22	    22	  71.0	     0	......................---------	|                                  	
==========	======	======	======	===============================	===================================	==================
         5	    31	  88.4	    34	GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	                                   	       

# Left flank :   |
# Right flank :  G

# Questionable array : NO	 Score: 8.48
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.42, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGCCCTCACGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-7.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [1-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//


Array 1 3454-3227 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AKBO01000686.1 Xanthomonas vasicola pv. vasculorum NCPPB 895 scf_9771_2451_contig_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	===============================	===================================	==================
      3453	    31	 100.0	    34	...............................	CATACAGACCCTGCCCCCTCAATGCGCACTATAT 	
      3388	    31	 100.0	    35	...............................	TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA	
      3322	    31	  93.5	    34	..........GC...................	AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG 	
      3257	    31	  90.3	     0	.............A.A.....A.........	|                                  	
==========	======	======	======	===============================	===================================	==================
         4	    31	  96.0	    35	GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	                                   	       

# Left flank :   TCACGGGCGCGTGGATTGAAACAGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCA
# Right flank :  ACTTTAGACTCGCCCGCCAGCCGGACGCTGACCAGGTGCAGGTTGGAGACGCTTGAGGCCTGCATGTAGCACGGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGCACCATTATTTGACGATGATCGTCTGAGGCGTGCCTGCAAGCTTCCCGTCCACCATCACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCGGCCACCTGGCCATCCTGGTAGGCCAGCTTCGCCGACAGGGCCACGTTGCTCGCGCTGCCGTCGGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTGGCCGGCGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACGCTGGAGACCGTCACTGCACTACCCGTCGCAGCGCCGCCATCGGTGCTGGCCGCTCCGGTGG

# Questionable array : NO	 Score: 8.66
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGCCCTCACGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-7.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.41   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//