Array 1 59661-58412 **** Predicted by CRISPRDetect 2.4 *** >NZ_PENV01000001.1 Proteus genomosp. 4 str. ATCC 51469 Scaffold1_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 59660 29 100.0 32 ............................. ATGGTGGTTCGATTGCCTTGCCTCCTCTAGTC 59599 29 100.0 32 ............................. CAAAAGATATTGGTCGAGCAACCTACAAACAA 59538 29 100.0 32 ............................. GTATTTATGATGACTGGGTGCGCATTCAGGGT 59477 29 100.0 32 ............................. CTATATTGATTGTTTCTCCTGCACTATGCTTT 59416 29 96.6 32 ............................A GGCTATCTACTCATGGCAATTATCCGGAAATG 59355 29 100.0 32 ............................. TGATTATGGATACGAGCACATTTCCTTTAACG 59294 29 100.0 32 ............................. CCAAGATTAGTGATGTATCGGCATCAATAAAC 59233 29 100.0 32 ............................. GTGCCTTTACGCCCGAGCAATTGGAAGCGTTA 59172 29 100.0 32 ............................. CCACCAGCAAATGATAAAAAATACACTCCTAA 59111 29 100.0 32 ............................. GTTGATGCTTATCTATCTGATGCGAAAGAGAG 59050 29 100.0 32 ............................. CCATTTAATAGTTTAATGGTTTATTCAATAGA 58989 29 100.0 32 ............................. GAAACTAATTAACGGATTTTAATTTCCCGTCA 58928 29 100.0 32 ............................. CAATGAAAATAATCTCACAACTGATCTCGGCA 58867 29 100.0 32 ............................. CGCAATTTGGCAAACAGCAGGGCATGATTAAC 58806 29 100.0 32 ............................. ACCGTAAACAGTATGAAAACAAATATCTACGT 58745 29 100.0 32 ............................. CAGAAAAATAAGTTTAGAGGGGCGGGGTAGGG 58684 29 100.0 32 ............................. TTGAAAAAATGACACGCGGAATTCATAATAAT 58623 29 100.0 32 ............................. GTTTTAGGGCTTTAGCAAACCAATTAACATCA 58562 29 100.0 32 ............................. CTATAACTGAGTTATCAGCTAATACATCTAAA 58501 29 100.0 32 ............................. TGAATTCAGAATACGCACCTAAACTGGATATT 58440 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.7 32 GTGTTCCCCGTATGCACGGGGATAAACCG # Left flank : CATCAAACACTCAATAAACTTATACCTCTAATTGAAGAGATCCTTTCTGCTGGTGATATTCTTCCTCCTGAACCACCTATTGATGCTCAACCACCTGCAATTCCTCAAGCTCGCCCTTTTGGTGATGAAGGGCATAGAGAAAAATAGTAATGAGTATGATTGTTGTTGTAACTGAAGCTGTACCGCCTAGATTAAGAGGGCGGTTAGCTGTGTGGTTATTGGAAGTTAGAGCAGGGGTTTATATCGGCAATGTTTCTGCTCGAATAAGGGAAATGATTTGGCAACAAGTTAATACGCTTGCCGAAGATGGTAATGTTGTTATGGCATGGGGAACTAATACTGAATCCGGTTTTGATTTTCAAACGTATGGTGAAAATCGTCGAGAGCCTATTGATTTTGATGGCTTAAGGTTAGTGTTGTTTAAACCTTTAGACGATGAATAATTTTGGTAAAAATAAATATATTTTTTTATTTAATTAAATCAAATGGATATAATTAGA # Right flank : ACGTTCCCTACAGGAATCACACCTATAATTTTTTTCCTTTTCTATTAATCTTCGTCATTGAGCCTATACATATATCACTTTGAATTAATATGTTTATTTTATGAATAATAATGCTATTATCCTGAGTGAATATTCACGATGTGTATATTTTCGTACCTAATTAATTATAAAAATAGGTTTAACATCACAATCACTAAGGAAAAAGAAGATGTCTTTTGGTATTCGATATCTTGCGTTGTTACCACTTTTTGTTATCACTGCTTGCCAACAGCCTGTTAATCACAATCCACCAGCGACTCAAACAGCTCAGGTTCAACCTGCAATCGTGAATAACTCATGGATTGAAATTTCACGTAGTGCGCTCGATTTTAATGTGAAAAAAGTACAATCACTTTTAGGTGATAAATCCTCGCTTTGTGCTGTTTTAAAAGGGGATGCATATGGCCATGATTTATCGTTAGTTGCACCTGTTATGATTGAAAACAATGTGCAATGTATTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTATGCACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-90.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //