Array 1 17431-17860 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWNH01000017.1 Mammaliicoccus sciuri strain 207NS 207NS_R1_(paired)_contig_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 17431 36 100.0 30 .................................... ATTTAGAATTGCAATTTGATGATGTTAAAA 17497 36 97.2 30 .......A............................ ATATGATTTTAGATAACAGTGATTTGAATA 17563 36 97.2 29 ..........A......................... AGTTAATACGTCCGTTACACAGGCTAATA 17628 36 100.0 30 .................................... CGAAAGTGATTGAAATTTGGAATGCAGTTT 17694 36 100.0 29 .................................... TCCGTCTAACGCTGCAATATTAAATCTAT 17759 36 100.0 30 .................................... AAGTTGGTCAGAAGATTGGTAAAGCATATT 17825 36 94.4 0 .............................T.....C | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 98.4 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT # Left flank : AATTATCAAGCAAAAGAAAAAACATTTGTAATCTATTTATATCCAGAAGCGGGCCTTAGTATTAAAGAACAAATAAGATTTAGGAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACAGAATCACTACGATTTTTATCTGAAAATATTAAAGGACTAAATTATTTTATTAATAATATTCAAATGATTACAGAATCTTTTTTGAAGATAGCTGTTGGAATTCACCAATTAATGTAGAAAAAGAACAGATTGAAGAGAGGTTTGAATATTTATTTATAAAATATTGTTCATTTTTAGAAATAAAACCGATTATTTCTAACTATTTACTTGCGGATATCATTGTTTTTAATGATATTGATCTTTATATCCTTGTTTCATTTTTAAAACACTGTAATCTAGAGTATCAATTAGATATCGATAAAACAAAAATTTCATTAGCATTATCGACTTATCTATTTTCTTAATAATAATTTGAGTTTATAATTGTGCTAGAG # Right flank : CTTGAAAGGATATTTTTTGGCTTTTGACAGTTTTAGAACTGGACCTTCTACGCTTAATTAGACATCTTCTATGAATAGAAGAATTGTTGTTATTAAGAAGGTAGGGGGTCTTATTATGAGAAGCGAGCATACGGTTAGGAATTCAAATAACAATTTACCACAACCCAAAAAACCGCCCGATTCTGTAGTTCGCTGCTACGAATCGGGCGGTTGTTTTTTTATACGTAATTTAATTATTCCATTAAGTAACTGTCTTCGGCGCGTTTGATTGTTTTCTTTTTCCATGGGTCGAGTATTGGTTTAACGATAAATCCTATTGTGAATATGACGACGCCAAATAATACGAGACATATGAGATTGTATATGAGTATTTCTGGTACGACGCCTCCGACCGCTTCTCTTAAAGCATCTACAGCATAAGTAAATGGCAAGTACGGATGTATGGCTTGGAAGAATTTTGGTGTGACTTGTATCGGGAATGTCCCACCACCTCCTGCTAT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //