Array 1 5-237 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHBV010000409.1 Bacillus cereus strain N19 IILOALHO_409, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 5 32 100.0 33 ................................ TGGTATATCAATGTCTTTAATTAAATGGCTTTC 70 32 100.0 36 ................................ GACTTTGCCAATCAAGGCATCCCGAATCAAGGCGGG 138 32 100.0 36 ................................ TAGCTGGCGTCGCTAACCTGATCAAAGACGTACCAA 206 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 100.0 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : CCCTG # Right flank : CGTATTCAATATAAAAACGGCCGCATTCTCGACAGTCGCACTCTATATGAG # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 44561-43817 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHBV010000033.1 Bacillus cereus strain N19 IILOALHO_33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 44560 29 100.0 37 ............................. AAATATAAAACATTACTATCGGGGGCTTACAGTCAAG 44494 29 100.0 36 ............................. TTCAAATGTCTTGCGGACTACTATTGAATCTCCAAG 44429 29 100.0 35 ............................. TACCTAGCACACTCATAGCCATGCATAAGATAGTG 44365 29 100.0 36 ............................. ATTGAAGAAGCGGAAAACATCGCAAAGGGATATATA 44300 29 100.0 36 ............................. TTAAAATCGAAAGTATGGGCGTAATAATTGGTTACA 44235 29 100.0 36 ............................. TTGGAGTGATAGTATCAACGCTTTAAAGACTACTAT 44170 29 100.0 37 ............................. AGCTTTACTTCATTCTGGACTTGTTAAAGAAATTTTT 44104 29 100.0 36 ............................. TCATTATTTTGCTAAAAACTTTTTAATTGGTTTGTC 44039 29 96.6 35 ............T................ TTTACAATTAGTAAGGCCTTGTTACGCTCCATGTG 43975 29 100.0 36 ............................. ACAAGACGGAGTTCGTTCTTACCATGATGGAAGTAA 43910 29 100.0 36 ............................. AGCATTAACATCTTTTGTTTCTTATCAAACTTCAGG 43845 28 86.2 0 ........CG...-..............A | T [43829] ========== ====== ====== ====== ============================= ===================================== ================== 12 29 98.6 36 GTTTTATTTAAACGTAGTGGGATATAAAC # Left flank : CCTGAGCGTTACTTCGGGGTGTTCCATCCCTAGATGTCCAACGGTTGGACGCCCTTTTGGTACGGTTGATATTTTACGCAGGAACCGAATGGCTTGGTTTTCGCACTCTATTTTCTTCCTGCAACTTCATATATCAAGTTATCAAAGAACTTCATATAGCTAGTTTATCAAAAGTTTTTGACTATGCCAAACCGAAATTCATCTCCCACCTACCGCTGGGCTACGCCCTTCACACGCTTGAGGAAGGAGAATTCTTTCGGGGAATTCGTTAAATTGAATTTTATAATATATTATAATTTACTAAGATTATTTTATAGTAGCAACTATTTTTGCAGTGTATCTCTTTACTGTAAGTAAATGTTAACCCCCTTGTCTTCCAAGGCTTTAACGGCATTTTTGAAAAAGTTATGAAACAAGACTAACGATTCACTGCAAAACCTATAAGTTAAACACATTAGATTCCTTGCTTTAATGAGGTTTTATTCTACTTTGTATAGGGG # Right flank : GTTTGTAATGAAACCATAGAAATAGAGTCCTAATTAAAAAGGGCTCTATTTCTATAGTTGATACCTTCAAATTTTTTATCTTTCATTAGATCAATTTCACATTCAAGTTCTTTGGTTTCAATATTTAAAAAGTCCATTGTTATTGCAAGAACTTTTCCATCTTTCTCTCTCTTAGATCCCCATAAACGAACCGCCCTATTGATTTTACTATCTTCATATGTGATTTGAACTGTTCTTAATACCTCTCCATCCACAAATTCACGATGTATCCAACATTCTTGAAATTTTAAATTCTCATCAGATTTATGCATGTTATAATTGAAAATTGCTTCTTCTAGTTCTGGAAAGCCCAAACCTTTTTTCTCTAAACCAATATACTCAAAGTCCCAAAACTTTCTAAAATGATAGATAAGCTCTTTTTGACTTTTCATTATAACTCCTCCACCCAATAATTTTTTAAGCGTTATGTATATTTGATATCTGTTACATGATTAATTTTA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTAAACGTAGTGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 55061-54512 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHBV010000033.1 Bacillus cereus strain N19 IILOALHO_33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 55060 29 100.0 36 ............................. AACCTTACAATGGAACTATCGCTAACTCAACTATGG 54995 29 100.0 35 ............................. TTAAGGACATTAGATTCATTAGCTAGCAGTAACCC 54931 29 100.0 37 ............................. GGAGCCACTTCTTCAAACGCTCCTGGCCATAATTCGG 54865 29 100.0 36 ............................. GTATGTTAAAAAATCGTGAGGGTGCCCGTATCTCCG 54800 29 100.0 37 ............................. GTATTTGAAGAACTTGCATTAGCATTTGACTCCTCAA 54734 29 100.0 36 ............................. AGAGTGCAAACGGTACGGCAAGAACAAAGAAGCAAC 54669 29 100.0 35 ............................. ATCCCGTATCAGTTATCGTTACGTTTTCATTGAGG 54605 29 100.0 36 ............................. GAAGGTCATGTGTTAAATCCGAATCCTCAAACTATA 54540 29 93.1 0 ........................G...A | ========== ====== ====== ====== ============================= ===================================== ================== 9 29 99.2 36 GTTTTATCTAAACGTAGTGGGATATAAAC # Left flank : AACAACTAAAGCTAACAGTTTACGTTTCATACTCACCTACCCCTTTGTTTGTTTATCTGTTACTTAATCTTTTTCATTTCTTTATGACCTTTATCTATTAGCTTAGAAGCGGTTATTAATTCATCACTTGCTATTTCTACACTTACTTCATCTCCCATAGATAAACCAGTTTGCATCGGCTCTACCCCTGCCTTAACATATGTCATTGCTTCATCTACTTCCTTCTGTACAAGATAATACTTTTGGTCATACGTTTCTTTTTTGTACATTTGTTTATTTCTTTAGGTTTTTAGATGTGTTACGTTTATATTGTAGTAATAACTAATTTTGCAGCGCATCTTAATAATTACGTAACATGCTAAATTTCTTGTGATTCATGGGATTAACATAATTTATGAAAATATTTATGAAACAAGACTGGCGATCCGCTGCAAAATTCGCAAACTAGTATCAATTAGATTCCTTGCTGTACAAAGATTCTATCACACTTTTTATGAGGG # Right flank : TATTTTATTATCGTAGCATTAAAAGTTTATCTGAACGTAGTGGTCAAATGTATATTATGAGTGATCCCCCTGAGATGGTTATTGTAATCTAGGGGGACTTTTTCTTTTTTAGAATCAATACAAATATTAACATGGAATATTTTTCATTTTATACTATAAATAAATATGGTTAGGAGGTTACAATAATGTCAAAGGTCTCAAACTCCCTTCGTATTCTTTTATTGCTTTCAAAAAATAGAAAGATGTCCGGGGGGCAATTAGCAAGAATGCTAGAACTGAGTGGAAGAAGTGTTCGCAAGCATATAAATGATTTGTTAATGGCGGGTTTTATGATACATACGATCAGAGGACGAAATGGTGGTTATTTCTTAGAAACAAACCCTCTTTGGAACAGCTTTTTAGAGCAAAAAGAATTAGATAAGTTGACTGAACTAGTCCGTAAGCAACTAACACTTAATCCGTATGATAAAGTTGTCCAACAATTAGAAGAAAAACTAAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTAAACGTAGTGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //