Array 1 1120959-1125463 **** Predicted by CRISPRDetect 2.4 *** >NC_018645.1 Desulfobacula toluolica Tol2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1120959 30 100.0 35 .............................. CTGGTTATCAGAAGTGTTATGGACGGGGGGACCGT 1121024 30 100.0 35 .............................. TAGTGTATGACGAGTACTTATATGCTATTGTACCG 1121089 30 100.0 36 .............................. TTTTTCAATAACTCCTTAATTTTACGTTCATTATTT 1121155 30 100.0 37 .............................. ATGTGTCAGCTGACACAGAACGAGAAGGATGGACAGA 1121222 30 100.0 37 .............................. GATTGAATCTAATAAACTGGCCTTAGATATTGTAAGC 1121289 30 100.0 36 .............................. AACTGCCACGCCTCATTATCAAACTCATACTCTGAT 1121355 30 100.0 37 .............................. TTCTGTGCTGTTGATTGGTGTGTTTATGATATCCATT 1121422 30 100.0 36 .............................. AACTCCTGCTTAAGCGCCTTTGACTTTGCAAATTCT 1121488 30 100.0 36 .............................. TAAGCACATTCACCCCAAACAACATCACCAGTTGTC 1121554 30 100.0 36 .............................. GTGGAAAACCCAGGCGGCGACCGGATACAAATAACT 1121620 30 100.0 35 .............................. ATAACTCATTGAGTTTATTCCTGAAGCAGCCACGG 1121685 30 100.0 37 .............................. CCCCTTGTAAAGGATGGACAGAAACTCGAAGCAAAAG 1121752 30 100.0 36 .............................. CTGTAACCTGACTCATATCAATTGCCGTCTGGGGCG 1121818 30 100.0 36 .............................. AGATTCTCAGAGATGGTACGCTTGTCAATCTTGGTT 1121884 30 100.0 37 .............................. AGCGTTGGGAGGATGAGGCCGCGCTCGTTATTCAGGG 1121951 30 100.0 35 .............................. AATAGTTCTGGGTATTTTTCCCGCGTCCGGCGTAG 1122016 30 100.0 35 .............................. TTCCGACATGGCGGTATCAGCTAACCTGCAACCAT 1122081 30 100.0 36 .............................. AGTGTTTGTTCTTCGTCACCTCCAGAATCTTGAGAC 1122147 30 100.0 36 .............................. ATCAAAAAACCACTGGTCACTTTATAATCTCTCGGA 1122213 30 100.0 37 .............................. TGATATGCAAAATAATCAAGTACTTCTTTAGATCCCT 1122280 30 100.0 36 .............................. TTATGATTTCAAAATCCTTGTAATTGCTCGAAATAA 1122346 30 100.0 38 .............................. TTTTGCATCTCTTTTTCTTGCTCATGACTTTTTATCTC 1122414 30 100.0 36 .............................. GCATTTCTCTGTTGAAAACTAAAAACTTTCCTTCAT 1122480 30 100.0 36 .............................. AATTTTATCGCCATAGTGACGATGGGTATCAAAATA 1122546 30 100.0 36 .............................. CATAATTATTCCTTTGGTACAAGCATTGTCATATCA 1122612 30 100.0 37 .............................. TTTTATGTGAAAATTACTTTTAACGGAAAAGAGCCTA 1122679 30 100.0 36 .............................. ATCCATAGTGGAGAAACGCATCATAGGGCAACTATA 1122745 30 100.0 35 .............................. CTTGAAGGGCAAGCCAATCCAGCAATTGACATGCC 1122810 30 100.0 34 .............................. TTAAAAGGGCCAGTAGCAAAATCAGGAACGGGCA 1122874 30 100.0 35 .............................. TGCTGATACCCACCCTGCTGGTTCTGCTGGCCCTG 1122939 30 100.0 35 .............................. TAATTAACTTTTGAATTGGAAAAAAAATATGACAT 1123004 30 100.0 34 .............................. CAATAACCCATTTTCTTAGTGACCCACCAAGAAG 1123068 30 100.0 35 .............................. ATACTCTGCGCTTTGACATTTATCTTCGCTAAATT 1123133 30 100.0 36 .............................. TAAAATCAGTATAATCAGTAATGGCAGGTTCGATAA 1123199 30 100.0 36 .............................. CGAAGAAACTCAAACCATATTGAATTTGTCAACAAA 1123265 30 100.0 36 .............................. ACGGTTGATAGATTCCCTGTTCCTGGCTTTGCTACT 1123331 30 100.0 38 .............................. TTGGTACATTAAGATATTTAATCATTTCTACCTCTCTT 1123399 30 100.0 37 .............................. AGGCTTGTATTGACTGTATCAATTGCAAGAGATCCTT 1123466 30 100.0 37 .............................. TCCATTATATTCAATTCAGCAGCGGTTGCCGTAACCT 1123533 30 100.0 35 .............................. TGACGTAGTGACTAATTTCCCGACCTTGTTGACTT 1123598 30 100.0 37 .............................. TGTTATAGTATTACAACATGGGTTTATTATTTTATTA 1123665 30 100.0 36 .............................. TGAGACAATGAAACTTTAATGTCTTGGATCTGCATA 1123731 30 100.0 36 .............................. TTATTAATCTTTAGTTTTTGAATGGCTCCGAGAAAA 1123797 30 100.0 35 .............................. TTCGGGAAAAAGAAATTCATGGCAGGTGGCGAAGT 1123862 30 100.0 35 .............................. ACATCGCAAAGCGGCCTTACTTCAGCCATATCAAA 1123927 30 100.0 37 .............................. AAGGGAACATTGCTTTTTTACCACCAACAATAAAATA 1123994 30 100.0 35 .............................. ATGTCCTGTAAGCCAGTCCCGATATTTTGAACATT 1124059 30 100.0 36 .............................. AACGGTGAAGTGGTAGAAAAAAAGATAAAAAAGCAC 1124125 30 100.0 35 .............................. ACTTGTACCAATATTTTTCGTGTCAATCAGCTCGT 1124190 30 100.0 35 .............................. TGTGGTGAGATGCTCTTGTTTACAAGATATTGATG 1124255 30 100.0 37 .............................. CCAATACCCCGGTTGATCGCATCGAGATAATCACCAA 1124322 30 100.0 38 .............................. TTCGCTGTTTTCAGTCCACCACTGTTGGAATAACACGT 1124390 30 100.0 36 .............................. AGGTTTGCGCGACGTGGAAAATTTACCGTGACATAT 1124456 30 100.0 37 .............................. TTTGGAGGGCAAACAGGAGACTCAAGGAAAAGCTGTT 1124523 30 100.0 36 .............................. CGAAACAGACGTGTGGGCGCTAATCGAAAAAATCAA 1124589 30 100.0 36 .............................. TTGTAAGATTGAAAAACCTGTTTCAGAGTTTTACAA 1124655 30 100.0 36 .............................. TAATATCCTATTTTTTTGGTGATCCACCAAGAAGTT 1124721 30 100.0 38 .............................. ATACTAAAATACAAACGAATAAATATCCACATTGCCAT 1124789 30 100.0 36 .............................. TAATATCCTATTTTTTTGGTGATCCACCAAGAAGTT 1124855 30 100.0 25 .............................. ATACTAAAATACAAATGCTTTTCTG Deletion [1124910] 1124910 30 100.0 35 .............................. ACGGAATAACCAGAGATATTTCTCAAAACGCAATA 1124975 30 100.0 37 .............................. AGGATAAGCGGATTGCATTCAAGCAGTATGGACCAAA 1125042 30 100.0 36 .............................. GTATCCACGGCGTATGGGTCAGATAATGCTTTTCTG 1125108 30 100.0 35 .............................. ACGGAATAACCAGAGATATTTCTCAAAACGCAATA 1125173 30 100.0 35 .............................. ATGGTTCCAATAAGCTTTAGAACGGCCTCTTTCAA 1125238 30 100.0 34 .............................. TAGGGATGTTCCGACCATTGAACAATTAGAATGG 1125302 30 100.0 36 .............................. GCAGAAACCAAATAGCCGATGAATCAGACACGTTTG 1125368 30 100.0 36 .............................. GGTTATAGAGTATATGATCCATGTTTTTTATACCAG 1125434 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 69 30 100.0 36 CTTTTAATCAGACCAGTGTGGAATTGAAAC # Left flank : CAAACGGCTTATACGGCTGGAGTGTTATAAAATTGTTAAACATATTCTGGGTGAAGAAAAATATACCGGGTTCAAGATGTGGTGGTAATTATGTATATTATTGCAATGTATGATATAAATACTGAAACAAAGGCGGGTCGGAAAAGATTAAGACATATGTTTAAATTATTGAAAAAATACCTTATCCGTATTCAGAATTCTGTCTTTGAGGGGGAGCTTACCAAAGCTAAATTTGAGAAAATGAAGTATGAAGTCAACGATATTATTGATAGCTCAAAAGATTCGGTTATTTTTTTCAAAAGCCGTGATATCAAATGGATGGACAAAGATATCTGCGGGTTTGAAAAAGATGATACGGATAATTTTTTATGAGTGCTTGTTCTTTGACAATTTATAAAAATCCGTCGATCTTCCTATGATTTTACGCTATTGGGGGTTGACGGAAAAAACAGTTTGATTTATTAATACAACCTGTTAATTTTATATTGTTTTTTTGATGG # Right flank : CGTAAGCGATGTTTTAACCCCACTCAGGGGGCGGAAGGTCAAGCCAACTGTTTTTTATCGACATTGTATGGAAGCAACGCCTTAAAATCATCTTCCGTCATAGCCTCAGGCAAGTGTTCAAACAGATATTTGAGATACCAATATGGCTCCAGCCCATTTGATTTGGCTGTTTCAATCAAGCTGTAAATCAGTGCACTGGCCCGGGCACCCTTAACGGTGTCCGAGAAAAGCCAATTCTTTCGTCCGACCACAAAAGGTCGGATGGCATTTTCAACCAGATTGTTATCAGGCCTGATGATTCCGTCGGTCGTGTATTGGATGAGCCTGTGCCATTGGTTGAGAGTATAATGGATCGCCTTGCCAAGCAGACTTTTGGGAGGAACTTTTTCCACTCTTGCATCAAGCCATTTCTTGAACTCTTCTAAAATTGGAACCGCTTCTTTTTGCCTCCGAGCATATAATTGGTCAGGCGTTAATTCCTGCACCCGGGCTTCTTTTTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCAGACCAGTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 2 1127872-1128164 **** Predicted by CRISPRDetect 2.4 *** >NC_018645.1 Desulfobacula toluolica Tol2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1127872 30 100.0 35 .............................. ATTTTCTGGGGGCACAACGGTAGAAATGGGAAAAG 1127937 30 100.0 36 .............................. TACATTAATAGTTCTGAATTGCAGCAAAAATTTGAA 1128003 30 100.0 36 .............................. TGACCACGGATTATGGATCATCATAAATGCATTTTC 1128069 30 100.0 36 .............................. ATGTAAAAGCAAAATTAAACGAACGAGGTAAAGCCT 1128135 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 100.0 36 CTTTTAATCAGACCAGTGTGGAATTGAAAC # Left flank : ATCCGTTGCGCCTAAGAATAGATAGACCTTGGTGTCTGACGGAAAATTCATCATTGGACAGCCTTCAATACAGAAAGCACCTGCTCAAGGGTTTCTTTCTTAAAACCGTCAGGGATTTCCACTTGCAGTTCCCGGCCTATATTCAGTTTTAGCCCTGCTTGACAAAAGTGAGTCGGCACAGGAACCTGAACCAGTCCTGTGGGCTGATTTGGTTTACCGAATTTAATCTTCCAATAGGTGAACCTGTTCGGCCTCAGGCCATTCTGGCGGCAGTACTCTATTTGGGACAGGCGGGATTCAGTCCATTGATCGATATGTGTTTTCCAGAATATTGCCTTTTCTTCGTTTATTTTCTTCCACGATTTGCTCAATACACACCTCCTTTTTGAGAAGAGATATTAAGCGAAATCTGGAGGCCTTAGTAGATGGGGTTTAATTACCGCTTACAGTGTGGAATTGAAACATTTTTTCACTACGTTGGTATGTGTTTGGCTCTAAGG # Right flank : CACAAGCTGCTTATCAAGCTGGAATCCCTCAATATGATTTTGAGGCAAAAAGGCAGATGGCCTCGAAGCCACATCTGAAAAGTCAATACTGGGTTACATAATCAATCAGTACCCATGCATCCGTCCCTGTGATCATTGCTACCGGAGGTGCTGCCTTTACCATGACTGTACATCATTCAAACCGTAACCGGTGGTGTACAATGATTACGGTTTGAGCAGTTCAACGGTCAGGCATTGGGGTGAATCGTCAATGCCACGATTTCATTCATATTATTGATCTGTTCCAGGGATTTGATTTTTTTGATCAGGTTTTCTGTTTTTTCTTTGGAAATGGCCATAATGGCTGCATTACGGTATTTTTCAGCCAGTTGCTCAAAGGTCAGGGGATTGTCCGGATCTCCCTTGGGTTTGGCCAGAAACCGGGCGTATTTGGTGCCGTCTTTCATCAAAATTTTCACTCTGGCACCAAAACCGATTCGCGGGTCAAGTGAGGTGTGGAT # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCAGACCAGTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 3 3489798-3490420 **** Predicted by CRISPRDetect 2.4 *** >NC_018645.1 Desulfobacula toluolica Tol2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 3489798 37 100.0 37 ..................................... CAGCAAGCTTAAGGGGCGAGGCATTAAAATAGTTGTT 3489872 37 100.0 37 ..................................... CAGCCAACTATCTGGGTATGAATATTGCCGAAATGTT 3489946 37 100.0 36 ..................................... CCAAGTCGCCTTTATCAACGGTGATCGTCGGCTCTG 3490019 37 100.0 35 ..................................... ATGTCGGTGAGGGCCTGATTTTCGAGACTCGTGTG 3490091 37 100.0 36 ..................................... CCGGAAGGCCGCCACCCTCAGCGGTTGTTGAGTTCG 3490164 37 100.0 37 ..................................... AACCTGGGGCGGCTTGTATAGCGCCCAAACCCATAAG 3490238 37 100.0 36 ..................................... TGAGTTGATAAAAAACCGCACTGTAATTTTCAGCAA 3490311 37 100.0 36 ..................................... CATGCTGTAATCTGTTCCGGTGTTGTCCAATTCACA 3490384 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 9 37 100.0 36 GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAAC # Left flank : GTTGATGAAATTTTGTTTATGGCGGATGGGTGTGCAGTGCCATTGGACTACAAATATGCCGAATTCAAGGATCGGATATTTGAAACATACCATTTTCAGTTGGTTTTTTATGGGAAATTAATTAAAGAGAATTATGGTGTGCCCGTTAATGACGGGTATATCGTTTATACGCGTAGTAAAAATAAATTGGTTCGTGTCGATTTGAAAAAGAAAGATTTTGAAAAATTAAATGATACAATTGAAGAAATCGATGTAATTATTAAAAATGGAAAATATCCAAAACCAACAAAATATAAAAAACGGTGTATTGACTGTTGCTATAAAAATATTTGTGAAAGCTGAAAAAAAGTTGATTAATGCTATAAATACAAATACCTATCATTTCTTTGGTGACTTGGAAATAATGAAGAATCCAATAATATTGGTTAAAATTTATATTATATTGTTCTTTGAAAATTTGTTTAACATATTTAAAATTAAAGGGAATTTTAAGAAATGAA # Right flank : CTGTGTCAATCAAAACGTCATATAGCTTGAAATCTCCTAAAACAGAAAAAAAGCATAAAGATAAAATGCCTGCAAGCAGTTTGGGGTAACATTTATCTCATGAAAGTACTTGAAGTCAATACAATTCAAATGTGTTTGCTCCGGGCTCATTTTGATAAACCCTTGAATTCTATGCTCAGTCAGTGTACAATTTAAAGATTCGGTTTGGTGGTATGTTTGCATAAAAGGCAGCTTACCTGAAAAAATGCCAGGCTTTTTTAATATATTTAGAATCTTTGATCACTGCATTTTAGTGTTGAATGGGTTATATCAATTTCGTTTGTTGTTTGCCTGAAGCCGGAAGGATTTTTCATCTGCTAAGTGATTTAAGAGTGTATCAATTTTCAAGACAAGGAGAAAAGATGGACCCCAATAAATTTAGAGAATCCAGACAGGAAATCAATCGGTTATGCGAAAATATTAATGTATTAATTGAACAAAATGCGCTTGAAGCCTCAAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA //