Array 1 110864-111258 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QFWG01000008.1 Pseudoglutamicibacter cumminsii strain IME1328 IME1328_08, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    110864	    29	 100.0	    32	.............................	CGGCCGATGAGCGCCTTAGAGAGCCCCGTCTT	
    110925	    29	 100.0	    32	.............................	GCGCGCGACGTCGTAGCCGTGAGGTCGGACAT	
    110986	    29	 100.0	    32	.............................	CGCTGGACGAACGCAGAGCTCGCACGGCGGGC	
    111047	    29	 100.0	    32	.............................	GGAAACAACGATAAGGATAGAACAAATGGCGA	
    111108	    29	 100.0	    32	.............................	CTTGGGGACCTCATCACCAAGACAGAAGGACG	
    111169	    29	 100.0	    32	.............................	GGTTAGCGAAAGTCCGTTCGTTCCACAGGGGG	
    111230	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
         7	    29	 100.0	    32	GAGTTCCCCGCGCCTGCGGGGATGATCCC	                                	       

# Left flank :   GATCCTGATTCTTCACCGCTGTTTCTCTGGGGAGGCTTTGGTGAGGATGTTGCAGCAAATACCAACTATGGCGGCTGAGTCATGTTGGTGTTAGTTCTGTCCGCGGTGCCTGCAGGGTTGCGGGGGCATGTGACTCGGTGGTTGTTAGAGATTTCTCCTGGCGTTTTCGTTGGGAGCGTTTCCCGGAGGGTGCGTGAGGCTCTTTGGGAAGAGATCCGGGGTTCGGTCCGCACTGGCCGGGCGATCCTGGTTTGGCAATCGAATAGTGAACAAGGTCTTGAGTTTTTGATTCACGGGCATCATTGGGAGCCTGTGGACTTTGATGGGATAACGCTCATGATGCGACCGCATCAGCCTTCCTCGAGCTCAGCCAAGGTTGGCTCCAGCAACGCATCGAAATGGCGCCGCTACGGACGCAGATCAAACTAATGTTCCCGAGTATTGTCTAAAGTGAATCTTTTGACCGCACCAAGGTACATTAGACCCAATGGGATCCAAGT
# Right flank :  GGTTGATTGCGTTGGAGGAACGGGAGCAAC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCTGCGGGGATGATCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GAGTTCCCCGCGCCTGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [58.3-21.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.14,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//


Array 1 158836-158685 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QFWG01000004.1 Pseudoglutamicibacter cumminsii strain IME1328 IME1328_04, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    158835	    29	 100.0	    32	.............................	TCGACCTGCGCGACTGCGACCGTGTCCGGTTC	
    158774	    29	  96.6	    32	............................C	GGCCGTTGCTATCCACCTGCCGAGGTCGCCGA	
    158713	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
         3	    29	  98.9	    32	GAGTTCCCCGCGCCTGCGGGGATGATCCG	                                	       

# Left flank :   GCAGGGCGCATTCAAGAACGCGGGCG
# Right flank :  CTGCGCGGCCGCAGTGACTCGCATGCAAGGCACAATTGCAGCCGGGGGATACGTTAGTCATCCGCGCCCTGGATCGTATCGCGGGGACCGAGCGTATGGCCATTGAGATTATCCGCGAGCTGGGGGAGCGCGGTGTGAGGATCAAAAGTCTTACCGAGCCATTCTTAGACGTGGACATATCTACGCCGATGGGCGAAGCCATTGTGGGCATCATGGCGGTCACGGCGCAGTTGCGCGTTTCTATGATCCGAGAGAACACCCGGCGAGGTTTAGCGCACGCGCGCGCTCAGGGGATAGTCGGAGGGCGGCCGCGCGTTATGGATGCAGACCGCACCGCGACGGCGCGGCAGCTGCGCGAGGAAGGGAAAAGCTATGCGCAGATGGCCAGCATTCTCGGTGTCAGCACCGCCAACGTATACCGTTCTCTGACCCACGAAACCCCTTGAAACCACGTGATAACACAAGTTATAATTGAAGTGGAGGAAGTCTCCCTTGAGGAG

# Questionable array : NO	 Score: 5.31
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCTGCGGGGATGATCCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GAGTTCCCCGCGCCTGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [36.7-13.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.64,4.87   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//