Array 1 342184-340774 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046316.1 Capnocytophaga sp. FDAARGOS_737 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 342183 46 97.8 30 ............................................A. AACTTTCGTACGTTCTTGTTTGTGCTAAAA 342107 46 100.0 30 .............................................. TCTTTGTTTGCTCATCTCATTCATTTGTTG 342031 46 100.0 30 .............................................. ACTTTGTTTGCTCATCTCATTCATTTGTTG 341955 46 100.0 30 .............................................. AAAGTGTGCTTGAGGGTCCTCCACTGGGTA 341879 46 100.0 30 .............................................. TTTTTCAAATCAATACCAAATAGGTGACAG 341803 46 91.3 30 .................G.......G......C...........A. TCTTGTCCGGGTTTCATAAAGTTAGAAAAC 341727 46 93.5 30 ..........A.................C...............A. TTGTATCTCTTGTTGTTTGTTTAATGCTTT 341651 46 97.8 30 ..........................A................... CCAACCGACCAACGGGAGGGAGGGCGAGAG 341575 46 97.8 30 ................................C............. TCATCGGCAAAGGTTATAATGCCTAACGTA 341499 46 93.5 30 ................................C.........T.A. TATACTCGTCAAAAGGGCGTTCCAGCTTTT 341423 46 97.8 30 ............................................A. CCTAAATCCAAAGCCTTGTAAGATGTAGTT 341347 46 95.7 30 ................................C...........A. ACTTTGTTTTGCTGTTTCATTCATTTGTTG 341271 46 93.5 29 .......................A........C...........A. CTCAAGCAAAAACCCCTTCAAAAAAGCCT 341196 46 95.7 27 ..........................A.................A. AAACGCGATTATTGGAGTAAGCGGTTT 341123 46 95.7 30 ..............................AA.............. TAACGCTATCTATATGCTACAAGGCTGGCA 341047 46 100.0 30 .............................................. CCTCCCTCATTGTGTATAGCTACATAGCTC 340971 46 97.8 30 ............................................A. ATGGCAGTTCCCTCTACACATTAAGGACTG 340895 46 97.8 30 ............................................A. TATCAGGTTATTCAAAATAGGGAAGTCTTT 340819 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 19 46 97.1 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACATC # Left flank : AGATGGTTTAAAAGTAATTAGAATAAACGCATCTTCACTGTACATTCTGTATACTACAGATGGAAAGACCTGGATTGCTAACGCAAAAAGGTAATTAAGAGAAAAAGTATACTAAAAAGCCCCGAAATATATAATATTTCGGGGCTTTTTATTTCTCCTATTTCCTTATTACTTCTTTTTAAATATCAAATTTATTAAAAATAAAATAACAATAGCTCCAATAGCTCCTGTTAAGATAGAACCAATCAATCCTTCTCCAAGAGAGATGTGTAATACACTTCCTAGAAGCCAATACCCCACGCTACTCCCAAGAACACCAATAATGATATTCCCTATTAGTCCTAATCCACTACCTTTGTAGATAGTTCCTCCTAACCATCCTGCGATGGCGCCAATAATAAGTGTTGCAATAATTCCCATAAATTAAAAATTTAAATTAAAGTACAAAGATAAGAATTATTATATAATAAAACAAATTAAAACTTTTTTATGCAAAAAAA # Right flank : CTCAATCTTTTAAAGATTTTAGTATCAATCAGTTTTACTTAAAAACAGCACTGAAAAACCTCCTCTTTTGCCTTATAAACAAAGGCAAAAGAGGAGGTTTTCTCTTTCCTATTCTTCTTAAAAAAGCTCTAATTGTACATAGGTTTCGGGGGCTGTTGTTTCCTTTTGGCAGTAGAAGAACTCCATATCGCCAAACTGCTTATCGGTTAGGCACATAATAGCTATATTGCCGTACTGTGGTAGGTTTTGTTTTACACGATTGATATGCACTTGGGCATTCTCCCTACTGGGGCAATGTCTTATGTACATCGAAAACTGAAAGAGCGTAAAGCCATCCTTTATAAGTTTATCACGAAAAACCTGTGCTTCTCTACGCATTTTTTTCGTTTCTGTTGGCAAATCGTATAATACTAATACCCACATAATTCTATAAGCATTATATCGTTCTGCTATGATCATAATTCAAGATAGACTATGAGTTGCTCATCTTTCCACTTTAA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.73%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [75.0-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //