Array 1 199956-200584 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PRAK01000002.1 Campylobacter jejuni strain CB367 2, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    199956	    36	 100.0	    30	....................................	TTTTGATAGCAAGCTTCGTTAGAAGTGTAG	
    200022	    36	 100.0	    30	....................................	TGGTTGCAGGAGCTAAACTTAAAATAATCA	
    200088	    36	 100.0	    30	....................................	TCAACAGTCAATTTGGCGTCAGAATAATGA	
    200154	    36	 100.0	    30	....................................	AAAATGACAGAAATACAATTTAATGAAATT	
    200220	    36	 100.0	    30	....................................	CAAGCAGAAAACGAAAGGCTAAAAGCTAGA	
    200286	    36	 100.0	    30	....................................	AGAAGTGAGATTTTGATTTTCTCGCATTTG	
    200352	    36	 100.0	    29	....................................	CACTCTAGATAAAGTTATCGCTCAATATA 	
    200417	    36	 100.0	    30	....................................	TTTGAGTAGTAAAATGCGTTAGCATTGTAA	
    200483	    36	 100.0	    30	....................................	AATCGCACCGAATAGGTGCAATGATTTGCG	
    200549	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	 100.0	    30	GTTTTAGTCCCTTTTTAAATTTCTTTATGATAAAAT	                              	       

# Left flank :   TTCACTTTCAAAAGACATGAAAAATACAATCTAAGCGAAGAATGGCTTAAAGCTATTGAAAATTTTATAAGACAAAGAGCTGAAAAAGCGTTAGAATTTATCAAAACTATTTAGATTTATATAATGATAAATGATTTTAGTTTTGATAAATTTGAAATTTATGAAAATTTGGTCTTTAAAAAAATACAGCAAAGATATAGAATAAATTTATAAATATAGCTGATATCTTCAAAGAAGGAATTTAAATAATGAAAAAAGAATAAGCTTCAAATCGCAGAACATATTTTACAAATTTGCTATTGAGGAAATGCTACTACAACCCCTAGTTTTATAGTAGAACATATCCAAGATAAAGACTTTGAAAATTTAAGCTTAAAAAACTTGAAATTTAGGTATAATACTGCTTACTATGTCGTTTCATAGTTAAGCCTTTAGGGTTATTTCCGCCAAGAGTGCAAACTCAAGGCGGGTTTTATTAATCAAATCTTGCTTTTTATTCT
# Right flank :  TATTCCTTTATCAAATAATGAAATTTTAAAGATTTTCGAGAATTTTTGATGAAAAATAGCAAAATTATGCTACAATATTTACAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTAAAATTCAAATAAATTTTGCTGATGGTATTTTTCTTGTTTTTTGTTTAGTTGTATTTCTTCATTATTTGAATTTTTGTATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTGGTTTCGTTATTAACTTTTTCATTAAAAACTATACCACCAAGCAAAAGCTCCATTTTATCAAACTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACGCTAAATTGCAACATAAAATAACCTAATTTTATAAGATTGTTTCTAAA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCCCTTTTTAAATTTCTTTATGATAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.56%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.27   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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