Array 1 123731-120829 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNKS01000009.1 Rhodoblastus acidophilus strain DSM 142 NODE_9_length_139583_cov_37.7978, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 123730 29 96.6 32 ............................T TGGCACAATGGCAAAAATCTCCGGCCACGACG 123669 29 100.0 32 ............................. CGGGGCCAACGGCGCGGCGGGCGGCATCAGCT 123608 29 100.0 32 ............................. ATTACGACCGCATGACCGATCACGAGATTGCG 123547 29 100.0 32 ............................. GGTGTGCAGAGGCTCATCCGGCAGATGACCGG 123486 29 96.6 32 ............................T GATGATCGCCCGCAGCGCTGTGCGGTCGTCAG 123425 29 100.0 32 ............................. GCGACGCTCATCCCGGCTTTCACGGTGCTGAT 123364 29 100.0 32 ............................. ATGGCGGAAGCGATGGCGGCGGCGCTGTGCTC 123303 29 100.0 32 ............................. GGCCGCTACGTCGTCGCGCATCAAGACGATGT 123242 29 100.0 32 ............................. CGATTGGCCATGGCCTGGATCGGGCGGACTCG 123181 29 96.6 32 ............................G GATCGAGCATCTCGCCTGGGTGGGGACCATCC 123120 29 96.6 32 ............................T TTCTGACGCCGGCTCCGGTCGCCTCGGGGAAT 123059 29 100.0 32 ............................. GTCATCACGTCCATAGAGCCGGACCAGATCGC 122998 29 100.0 32 ............................. GCCGTGCTCTTGTGCTTGATCGTCCAGTCGTG 122937 29 100.0 32 ............................. CGGCGGTAGGTGCGGTTGGCGAGGACCTTGGG 122876 29 100.0 32 ............................. AAGCGCGGCAAAAAGGCCGGCGAGTGGTTCAA 122815 29 100.0 32 ............................. CGCGTCGTCAATGTCGCTGAAACTGAAGAGGT 122754 29 100.0 32 ............................. CCACATGATCCAGTGACGTTCCAGTTTCCGGG 122693 29 100.0 32 ............................. CCCGCTCACGCCGGAGGCGCGCGCGGAACTGA 122632 29 100.0 32 ............................. GGCCATTGTCCAGCGTCAGCACATAGACCTGG 122571 29 96.6 32 ............................T TTTCCCGCGAAAATCTTGCGCGCTGCATAAGC 122510 29 100.0 32 ............................. CCAGGACTCGACCTGCGACGAGAAGCTCATCA 122449 29 96.6 32 ............................T TTCCATGCGTTTTGGATCGCTCTGGTCGTGCC 122388 29 100.0 32 ............................. TACGTCGACTCTGGCACGCCATCTCAAATCGC 122327 29 100.0 32 ............................. ATTGCTGACGATCGAGATGATTGTCGGCGCCA 122266 29 100.0 32 ............................. AGCTCCTGGATTTCCGACACGCTCATGTTCGG 122205 29 100.0 32 ............................. GGGTAGACTTCGCCGACGTCGAGCAGCAGATC 122144 29 100.0 38 ............................. TGGCGGCGGCGGCCTGCGCGGCGGCGGCGGCGAGCTGC 122077 29 100.0 32 ............................. GGCATCAGCGCCGGCATCGAGGGCGGCGATTT 122016 29 100.0 32 ............................. TCACTTACGCTGATTTGCGCGCTGTGTCGCGT 121955 29 100.0 32 ............................. TCGACGCCAACCTGCGCGGCTTCGGCGACTTC 121894 29 100.0 32 ............................. GACATCGGTCGTCATATTGGGCAGCGCGCCGA 121833 29 100.0 32 ............................. CTTCGCGCCTCCCTTAACGGCGTGGATCATGT 121772 29 100.0 32 ............................. GATCCGCATCATCCACTCGCGCTCAGGGATGC 121711 29 100.0 32 ............................. AGGACGGCGCGGACTGGGCGCCGATCTGGAAC 121650 29 100.0 32 ............................. CCGACCGTCGCGACGGCGGGATGCGACGAGGT 121589 29 100.0 32 ............................. CGCCTGCGAATGCTGGCGCCAATACGACCCCG 121528 29 96.6 32 ............................T TTACAAAGTCCTTCACGCCAAATGGGAAGGCG 121467 29 100.0 32 ............................. TTGTCGAATTGATTGGCGCGGTCGGCGCAGGC 121406 29 100.0 32 ............................. GCCAAGGGGCTGGAGAGGGGCGAGTTCGTCAT 121345 29 100.0 32 ............................. ACGCGCCGACCGTCGATCAAGCCGCGATCCAT 121284 29 100.0 32 ............................. TCGAAAAACAGCGCGTCGGCCGCGAACCGAAA 121223 29 100.0 32 ............................. TGGAAGGGGACAATTGACGGATACGGATATGG 121162 29 100.0 32 ............................. ACGACGGCGGATGGCGACCTATGTCTTGAAGC 121101 29 100.0 32 ............................. CATGCGCGCGATTTCCATGATCGGCTGCTTGT 121040 29 100.0 32 ............................. CTACGACATACCCTCCGGCAGGAATGAGCAGT 120979 29 96.6 32 .....................G....... GAGGCGCGCGGCAGGGCCGAGACCAATTCGGA 120918 29 100.0 32 ............................. CCTGAACCGGATCACCGGGCGCGGCTATTGCC 120857 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 48 29 99.4 32 GGTTCCCCCGCACACGCGGGGATAGGCCC # Left flank : GATCGAGCGCGCGACACGGCGGCGCGCCGCCATCCTGATGCGGCAGAAATCCGTGATTCCCACGATGATCGACAGGATCAAATTGCTGCTCGGCGTCGAAAAGGACGCCGCTCCAGAGCAGGAGACGGGTTGATGCCCATGGTCGTCGTCATAACGCGGGACGTCGAGCCACGGTATCGTGGCTTTCTCGCATCGGCGATGTTGGAGCTTGCGCCCGGCGTCTATGCTCAACCGCGCATGAGTGCGGGCGTTCGCGCGCGCATCTGGGCGGTGCTGTCGGATTGGCACGCAACGCTGCGGCGCGGCGCGATCGTCATGACTTGGGCGGAGAGCGCGGCGAACGGCGGCCTTGGCTTGGCGACCCTCGGTGAGCCGGCAAAAGACATTGTTGCGCACGACGCCATGCTTCTGGTGCGCCGTCCGCTTTCGCCGAACGCCGGCTGAATATTGGCTCGCTGTTTGAAATGGTTTATATGCAAATCAATGGCTTCACAGCCAGA # Right flank : GCTCTTAGCCGCTTTGGCTATGCTGCCACGTCTCGTCTTTCGTGTCGTGGACCGGGCAGCCCTCGCCCCCGCATTCCGCGCAGGCGAGCCGGCTTCCGCGCTGAAAATCCACGTACAAACCGAGCCGGACATCCTCGGCCGAAAACGCGCTGCGCGTCACCTTCCACGGCAACGACAAACCCAAGCGGCAGCGACAATTACTTCGGCGGTTCGCAGGCGTTGAAGACTTCCGGCTCCACGTGCTTGCGATCCGTATCGCGCTGGACGAAGAAAGCAATCGTCTGGGCGCCCATATGCGACAGGTGTCCGTGCGCCTTGAATTCCGGTCCTCCTTCTTCCGAGCAGGACAGGCGAAAAGCCCAGCCCGTCTTGTCCTTCTCGATTTTGGTGAAGTCGCAAGACACATTGTCCGTGAAAAGGTCTTTCGCGCCGATGCGCGTAAAGTCTTCGCTCGGGTTGGCGGTTTCACAATCCACCGATCGCGTAGATAAAGGGGAAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCACACGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,1.01 Confidence: MEDIUM] # Array family : NA //