Array 1 1510727-1508316 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084061.1 Blautia sp. NBRC 113351 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1510726 32 100.0 36 ................................ CAAGGTTAATGAGCTCAGTGAGCAAAACAGCAACAA 1510658 32 100.0 33 ................................ ATGATGATTTCTGCTGCCAAACAGAGGAAGAGG 1510593 32 100.0 34 ................................ CGTTATCTGTCTTAACAGTATTGCTTACTGACAT 1510527 32 100.0 34 ................................ CTTTTGCTGGAGGAGGCAGAGGCTTTTGTGTTGT 1510461 32 100.0 34 ................................ CGGTATTGTACTCTGTGGTGCTTCCCACCAGGGC 1510395 32 100.0 35 ................................ GCTCCCAAATCAACAAACGGGATGTTACCGTAAGA 1510328 32 100.0 34 ................................ CCTCATGTGGGTGATTGTCCCGTTACCACCTAGG 1510262 32 100.0 33 ................................ TCAAGTGCTGTCTCCGCCCTTTCCGTTACCTGT 1510197 32 100.0 34 ................................ TGCTCATATACGATTACTCTACCGGGTCAACCGG 1510131 32 100.0 35 ................................ TCTATGATGTGGTTTCTGCCAGCAACCTGGAAATC 1510064 32 100.0 36 ................................ ACACTGCATTGTTTATATCCTGGATCTCGGATCGGC 1509996 32 100.0 34 ................................ ATTACAAGGAGTAACAAGGCCTTACCAAGGCTGT 1509930 32 100.0 34 ................................ ATCCTTTCGACCTCTATTAAGGTGTACCCCGTAT 1509864 32 100.0 33 ................................ GTATAATTAATACATAAATGCAAACATTTGTTC 1509799 32 100.0 35 ................................ TCTGTAACAGGAGCATAAGCGCCATCGGCAGAACA 1509732 32 100.0 36 ................................ CTTCAATTATTCCCTCCTTTATGCAACTATTCCAAA 1509664 32 100.0 37 ................................ TCCGTATACATCTTCTGATCTATAGGCATATACTTCG 1509595 32 100.0 34 ................................ TTGGTACATTTGCGTATGGGTTGGATGGTTTTAA 1509529 32 100.0 33 ................................ TTGTATATCTCGAAGATTTGAGCAAAGGAAAGA 1509464 32 100.0 33 ................................ ATGCGCAGGAAAAACCGCCGGAACAGCTACTGT 1509399 32 100.0 33 ................................ CAGGTCAGGAAGTGAGAATGCGCTTGCCATACA 1509334 32 100.0 33 ................................ TCCCGAATAATCTAATCCGTTTTGTGCTCCTGC 1509269 32 100.0 34 ................................ TTCATGCCGTATTCTCTATCGGCAAAATCAAATA 1509203 32 100.0 34 ................................ ACCGTCAGTAAGAGAGATATGTAAGGCGGTTGGT 1509137 32 100.0 33 ................................ TCCTGAAAAATCAAGTCCATTCTGGGCACCGGC 1509072 32 100.0 33 ................................ ATTCCGGAGGCGCTCTCGCTCTGGCGAACAGTC 1509007 32 100.0 35 ................................ TTTCCAACCCGGTTTATTGTGCAAATGAGCTGGAG 1508940 32 100.0 34 ................................ ATCATATTACAGTGCCTTCTTGCCGATGTCGGTG 1508874 32 100.0 34 ................................ TATCAATGGAAGCAGGGAAAAGCTACAACAAAGG 1508808 32 100.0 33 ................................ TCCTACATTCAATTCAAGCTGATGCTTGTTCAA 1508743 32 100.0 34 ................................ TATCAATGGAAGCAGGGAAAAGCTACAACAAAGG 1508677 32 100.0 33 ................................ TCCTACATTCAATTCAAGCTGATGCTTGTTCAA 1508612 32 96.9 34 ............................G... TTTTGCTTCCTGCTGCCGCTCCTCCTTTCCTTGC 1508546 32 100.0 34 ................................ CCCAATGACATGCCGGTCCGTGATTATCCGCCCG 1508480 32 93.8 35 ....T..........A................ CATGCTCACCCATTACTATTTGATGGAGCATTCCC 1508413 32 96.9 34 ..............A................. TTTTCTTACATCTTCCCAGTTACATAACCGTTTT 1508347 32 90.6 0 ......................CA.....T.. | ========== ====== ====== ====== ================================ ===================================== ================== 37 32 99.4 34 GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Left flank : GTTCCGTTCATCAGGTATTCTATGAATCAGAAAGATGGAAAGTTAAAACTTTCATCCAGGACTGGCTGGATTTTATATGAAGGGGATCTATCTGGTTTTGTGCCAATTTTGGAAGCGGGTAAGTATCTGCGGGTAGGAAAAGGTGCTACCATTGGATTTGGACATTATGATATTTCTTATGATAAATAATGGGGAAATAAAAGGCTGGAAACAGTGGGATTGAGAGGGATTGTGATAAAAATCGGCCTTGAATTTTTTGTAGAAAATGCAGATGATATAATATTTGTTCAGAAGATGATTACTAAGCTTATTTTATAAAGTGCGAATGTGGAGTGAACATAGTTTGCCGGGGAGATTCGCACTTGAAAAAATGGTTAAAAATTGATGATGGAGTGATTTTTTTAAGATATATTTGTAGGAAAGGTTGCATTATTAATCAAAAAGGGTTAAAATTTGGTAGAAAGAAACAATATTTATTGGGAATATTGTGCATGTTTGCT # Right flank : CAGACAAACGTCTTTCCATATAACAGTGAGAGCATATCCCATATTTTCAAAGTATATCTGGATGTAGATATCCCTGTGGAAGTGAGAAAATTCGGATTTCTTGAACAGGTGCCAGAATACAATCTGGCTCCGGGATACTTGGGGATATAAAGACGGTTTTTTCAGGTCTGACACAAATCTTGGTACTGAAAAAAGCGAGGAGGAGGATAGAAGAGAAAAATTGGAGTTTCTAATGGAAACCGTAACCATTTTGTTCAACGGAGGGAAGAAAATTTATGTTTCGGACTATGCAGGGGGAGAAAATGTTGTAAAAGAATTGACAATAGATGCATGCCTCTTTGATATCGGACGGCCGTTTTGGGGACGACCGCGGGACAGAAAACCTGGACATTTGTCTCCAGTTCGGTCCGCCCGGGGAGGGGAAGATAAAGCCGGTCAGCCTGGCTGATAAAGAGGTGTTTACAGAGAACCTGTATGGCTTCTTATGAGAGATGGCAGGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 1776354-1775468 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084061.1 Blautia sp. NBRC 113351 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1776353 32 100.0 33 ................................ AACCTGGACTGGTATGCAAAAGGCGGATTCCCA 1776288 32 100.0 34 ................................ CAGCTATCTACCACAACCTTATTATCATACAGGT 1776222 32 100.0 33 ................................ TCTCTATTATACAAAAAAATGCTCCTTTCTAAC 1776157 32 100.0 34 ................................ GATTAAATTCATGGTTTCTCCTCCACTTTTTCCA 1776091 32 100.0 34 ................................ ATTCCACTGGCTCCCTTGCGGACGCAACCTGTGA 1776025 32 100.0 34 ................................ AACAATGATAAGGGGACCGAGGAGGTCTACGGAT 1775959 32 100.0 34 ................................ AAATACTGTGTTAGAGTGATACATTACTCACTCA 1775893 32 100.0 35 ................................ AATAAGTTCAGGCGGTAAATCTGTTTCTATGGGGG 1775826 32 100.0 33 ................................ TATATAGATGACAGGAGAAAAGCGATGAACGAA 1775761 32 96.9 34 .........A...................... ACAACGTATGAGACAGGTTTTATATTTCAGTCTG 1775695 32 96.9 34 .........A...................... CTGATAAATCCGGTTCAGTTTAAATGCAATATTT 1775629 32 96.9 33 .........A...................... AAAGCTGTTGTCCCCTCTGCTTGTGCATGTATA 1775564 32 96.9 33 .......................A........ ATGCAACATCTGCTTCTACTCTTGGACAATTAA 1775499 32 81.2 0 .............A..C.A..CA...A..... | ========== ====== ====== ====== ================================ =================================== ================== 14 32 97.8 34 GTCTCCGGCTTCGCGCTGGAGTGGATTGAAAT # Left flank : GAATAAATTGCTTTCCCGTGAGACTTTGGAGGCGTATTTTCTGGAGATTGAGAAGAAAATTAAGAATTATACGGAAAATCTGGAGGATGATATGCTGCTTTTGAAACCGGAAGGGTGTAAGTATAAAAGATTTACACTTATACTGGCGCAGCACAGGCATCTGCATACGCATATGGGAATGATTATGGGCGTTATAACAGCAGAGACAGGTCTTTGGCCCAGAGTCCTGGGACTGGAAGGTAAATTCCCGGATGGGGAATATGAGAAATATTTTTGAGGCGAAGATGCTTTTCTGGAATATTTGGATTAGGTGTGTTATAATGATATAGTGCTTTGGTGGTGCGAAACGTAAGTGGACATTAATTTCTTAGGGGATTCGCACTGGAAAAAGCGCATTGTGATAGGGGGATTGGTGGAGGAATGGGGTGGAGAATATAAAACATTAGTTGATTTGTATAAGGAAATGTGTAGAATATAGATGGAAATTGGTAATAATTGCC # Right flank : GCTTGTAGGAATACAACCACAGTTTTGGGTATTGTCTTTAGCTTCACACCGAAGACAGTCACAATAGTATTAACACTAAATACACCGGACAAAATTCGTACCTTGAAATTAACGTCCACTTAAATTAGAATCAAAACAAGATCACCTACCATTTATTCAACATTTTATATTTACGTTTAATAAAGACATAAAGATAATAATCAGCACTGCAAATTCAAATTTTTATCGCATTTATGCATAAAAATCATCTTGCAAATGATTCCCCAACAATAATACATCCCAGGAGATTTACATGAGAAAGCGTTATAACGTGACCGGAATCTGTATACCAGAGAAACATTATATGGTAGACATATCACAAAAAGTAAAACAAATTGTAGAAGAATACATTGAACCAGGGTATTATTTTGCAATTAACAGAGGCAGGCAATACGGGAAAACCACAACGCTGTATCAGTTAGAAAAATATTTGCAGGATCAGTACATGATTATCAGTATCA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGGCTTCGCGCTGGAGTGGATTGAAAT # Alternate repeat : GTCTCCGGCATCGCGCTGGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 3 3423689-3421239 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084061.1 Blautia sp. NBRC 113351 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 3423688 32 100.0 33 ................................ AATGTCAGAGGGGCAGGTCAATGCTACCAGTTT 3423623 32 100.0 34 ................................ TGTAATATTCCGTATGCGGCCCCAGTCCATCTTA 3423557 32 100.0 33 ................................ CGATCACGCTTTGTGCATGAGTGCTTGCAAACA 3423492 32 100.0 34 ................................ TATACAATGAATTAGAGATGGAAGGGGGGAGTTG 3423426 32 100.0 33 ................................ CCGGTTTTTACCATCCACTTTTTTTCTCATCAG 3423361 32 100.0 22 ................................ TTGTTAGTTGCCAGGTGTTTGC Deletion [3423308] 3423307 32 100.0 33 ................................ ATCACACAGAGGCTCATGCAGTAGGAATGACGG 3423242 32 100.0 35 ................................ CGCAGAGTATGCAGGAGCAGATAACATCTGCCTTC 3423175 32 100.0 33 ................................ ACTATGGTCTGCTCAGATATAAGAGCAGGCCGC 3423110 32 100.0 35 ................................ ACTCTCCGCTTAAAAAGTTCTATCAGGACACCCTG 3423043 32 100.0 32 ................................ ATATCAAAAAAAATTGCATCTATATCTTCTGC 3422979 32 100.0 34 ................................ TTATGCCGACACGGACGCAAAGAGTCGTAGCGAG 3422913 32 100.0 34 ................................ GGCAAGGTCCTTATATCCTCCCGCCTCATACAGA 3422847 32 100.0 34 ................................ AGTGGATATATCGGCGACAATCCAAGCTACTTAT 3422781 32 100.0 33 ................................ CCGTGGGCGAGTAAAAGAAAAGCAAATTTATCT 3422716 32 100.0 35 ................................ AATAAAATCATACCTGATATATTATCTATTGTTTT 3422649 32 100.0 34 ................................ CCGCCAAGGCACCGATATACTTAAAACTTTCTCC 3422583 32 100.0 34 ................................ AACATTTATTACAAACTTAGGAGGGATAACTGGA 3422517 32 100.0 34 ................................ CTTCCATTTCATGCTTAAAAGAATTAACGGTAAA 3422451 32 100.0 34 ................................ CCCACATCCAACCAATAGGATAGCAATGATTACC 3422385 32 100.0 34 ................................ TCCATCGGGATTTGCCAGTCATCAAATATCTTGG 3422319 32 100.0 33 ................................ CGGCAGGAACAAGAGTCACAAACGGAGAATTGT 3422254 32 100.0 34 ................................ CAGTTATTGACACGATTGGAATAGAGGTATCAGC 3422188 32 100.0 33 ................................ ATTTCCAGACGCCCTTTTGCCCGCAGCGCCTTG 3422123 32 100.0 34 ................................ AAGTAATCCCAGTTATGAGCCTATGTTCTTCAGT 3422057 32 100.0 34 ................................ CAGTAAATAACAACATGGTCCACAAGCGGAAAAA 3421991 32 100.0 33 ................................ ACTGCAACGCTCATGATAGCTTGAAGATACACT 3421926 32 100.0 33 ................................ AGTTCACCGATGATTTGCCCACCCGGCTCCCTC 3421861 32 100.0 34 ................................ ATCCGTCGCTATAAGCTTTATCTTGTTTGGTCCA 3421795 32 100.0 33 ................................ CATTTGACGTCCTGTTTTTCTTGACGGAAATGG 3421730 32 100.0 34 ................................ TACAGCATCCGTAGTACCAGTTATTGCTTTTATC 3421664 32 100.0 34 ................................ ATGGGTACTTTGATACGCTTACCTGTAACAGGGT 3421598 32 100.0 34 ................................ ATAGCACACCGGCTTGTCCCTCCTTTCTTACCGC 3421532 32 100.0 34 ................................ TCCATCGGGATTTGCCAGTCATCAAATATCTTGG 3421466 32 100.0 33 ................................ ACCATAAATTTCGTCCAATTTTGCCGTATCCCA 3421401 32 100.0 34 ................................ AGGAATCGGTCATGATTCTGGCATATATTACTAC 3421335 32 87.5 33 ...G...T..A..T.................. GTCTTGCCTCTATCAAAGAAAAGTTTGAATTTT 3421270 32 75.0 0 ....T.....G...AA.A.C...A...C.... | ========== ====== ====== ====== ================================ =================================== ================== 38 32 99.0 33 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : GATGAGTACCCGCCATTTTTCTGGAAGTAGGTGAGAGTATGCTGGTTTTGATTACATATGATGTAAATACCGAGACAGATGCCGGGAAAAGACGTCTAAGAAAGGTTGCAAAACAATGTGTTAATTATGGAAGACGGGTGCAGAATTCTGTTTTTGAATGCATTCTTGATAACACACAGTGTGTTTCATTGAAGGCTGTATTGGGGGATATTATTGATAAGGAAGTTGACAGCCTCAGGTTTTATTATTTGGGGAATAACTATAAGACTAAAGTGGAGCATATGGGAGTTGACAGGGGGACAGCAGCGGACTCGACTTTGATTTTCTAGTGCGAATAGGAAGTGAACAGAAAAACATTGGGAGATTCGCACCATATTTTGGGGTGTTGGGTGATGGGAAAAGGAGGAATAGAAGGGAAAGGGGTGGTGAGATTAGTGTGAAAGAGTCTATTAATTAGGAGTTTTATACAAAAATAGCTATGAAATTTGGGCATTTTTGCT # Right flank : TTAGTGACCAGACCTTGCAGAAAGAGGTGAGCATAAAGATGAATACAGCAATAAAAAAGAAACTCCCAATTGGAATAGAGAACTTTGAAAAAATTCGGACAGAAGATTTTTATTATATTGATAAAACAGGTCTGATCAAAGACCTTCTATATAATTGGGGAGAAGTAAATCTCTTTACACGCCCCAGACGTTTTGGCAAATCCCTTAACATGAGTATGTTGAAAAGCTTTTTGGACATTGAGGGTGACATAACATATACAGAAAAGTTATTTAATGGATTGGAAATTTCAAAAGAAACAAGCCTTTGCAAAGAATATATGGGCGCATTTCCAGTTATTTCAATTAGCTTGAAAGGCGTAAACGGCATAGATTTTGCAGCTGCGCGGGATATGATGCGTTCCATTATTGGGAATGAAGCGCTGAGGTTCTATTTTTTATCCGAAAGCAATAACCTGAACGAGAAAGAAAAAATGCAGTACAATCAGTTGACTGCAGTGGAT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 6179244-6181769 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084061.1 Blautia sp. NBRC 113351 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 6179244 33 100.0 34 ................................. CGGCATCATATGTGGCATATGACTGTCTGTATAA 6179311 33 100.0 33 ................................. CGGTACCGGACAAGCTCAAAGAAGTGTTATTGC 6179377 33 100.0 34 ................................. TATACCCATAAGGTGCAACACTTGAAATAAATTT 6179444 33 100.0 34 ................................. CTATCAGGTAGACCGTGTGATTGCCAACATGGGA 6179511 33 100.0 36 ................................. GATGGATACGGCAAGAGCGTTCCTGAACACTATCCT 6179580 33 100.0 34 ................................. AGCAGAAAGCGCTGTTGAGTAGATACGAAAATCA 6179647 33 100.0 32 ................................. TTATTTGATAATACTCTGTATACGCAATCTTT 6179712 33 100.0 35 ................................. AGCGTAACGGAACCGTCAGAGTTTTGAGTGATTTC 6179780 33 100.0 35 ................................. CCTTGATATAACCACCCTGCTCCTGTCCGGCGGTT 6179848 33 100.0 35 ................................. ATATTTACAAGTCCCCTTTTTAGTCACCTCGTATA 6179916 33 100.0 35 ................................. ACTGCCAGCAGTAAAGCAGACTATCCCCCTGAGGT 6179984 33 100.0 34 ................................. GGAAGAGGAGCTTCCGGATATCGTACAAAGGTGG 6180051 33 100.0 33 ................................. TTATCGGCATATAGTATGGAGGCAGTATGAGAA 6180117 33 100.0 33 ................................. TGAATTAGTGCATTAAGTAGCGGGGCAACCACA 6180183 33 100.0 34 ................................. TCTGCTTTTTGGAAAACATTGAACGCATCCTGTA 6180250 33 100.0 33 ................................. ATGGGTACTTTGATACGCTTACTTGTAACAGGG 6180316 33 100.0 35 ................................. CTGTCTCAAATCCCGTTTGTGGAGGACCCAGACGA 6180384 33 100.0 35 ................................. CGATAAAAGCATTGATTGCGATAGTCTCGTCGCTA 6180452 33 100.0 36 ................................. TTCCATGACTGTCCGTGTCTTACCTGCCCCCGTCTC 6180521 33 100.0 35 ................................. ATATTCAACCAGCGAGCGGATTTGGCGGTCTATCA 6180589 33 100.0 34 ................................. TCTTTGCTTCTTCACTGCTTAGATGTCTTATCGG 6180656 33 100.0 35 ................................. CGGATGGTAATATAGACGCCTGGCATAAGGTTGTG 6180724 33 100.0 35 ................................. TACGATCATCAACATTTTTATCTGTAGACCGCTTA 6180792 33 100.0 36 ................................. GGTGCATAAATCTTTGCCATTATCTGCGCCTCCTTG 6180861 33 100.0 34 ................................. TAACTTGCCCATGTCATAGTTACGTGGCAAAAAG 6180928 33 100.0 33 ................................. TGCAACTCCACAAGGCTATACATGTAATCACCC 6180994 33 100.0 34 ................................. TTTTTGGGTAAATCATAGTTAATACACGTTTTAT 6181061 33 100.0 33 ................................. GTATAGTTCTCCAGGTCAATGTCAACAATTGAG 6181127 33 100.0 35 ................................. AATAGTCAAAAAGAAACAAAGTGGTTATCTCGATT 6181195 33 100.0 34 ................................. GTCATAAATCATTATATAAGGGCTGTATCCCAAA 6181262 33 100.0 35 ................................. TCCAAACGGACTCGCGGACTTGTGGGCACAGGTGT 6181330 33 100.0 36 ................................. AAAAGACGGTAATGGACGTTATGAGAAGACCATAAA 6181399 33 100.0 34 ................................. TCCGCCTGATGACAGATTTACCAAATCAGAGTTG 6181466 33 100.0 36 ................................. GTCTATGCCATCTGGCATTGTCATAAATCCGTCTGC 6181535 33 100.0 34 ................................. AGAGCATCTAATCGTGCTTTTATATCCACAGTAT 6181602 33 100.0 35 ................................. GTGTAACCGGTATTACATACCTTTTTCCCCTCACG 6181670 33 97.0 34 ........................A........ TCATCCTTTTGTACATTGCTCCGTTTGGCTCTGT 6181737 33 84.8 0 ...............A.......AA.C.....C | ========== ====== ====== ====== ================================= ==================================== ================== 38 33 99.5 34 GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Left flank : ATCCAAAACCCCAACCGCCGACTGACAACAATAAAGACAAAGGCAAAAATCCAAGCAGACCATCCGGCGGTGGAAGCCAGAAAGGAACCTCTTCTGCAAAAACAGGGGATGAGACACCAATCGGCATGTTTGCAGGTTTGGGCGCCGTTGCACTGATCGCTATATTTGCCTGCACACTCAGTATCTTGAGAAAAAGAAAAAGGTCATAATCAAAAACAGAACAGCATAAAACGCAGTTCTTTTATCCCCCGGAAGATGACAAAAGTTCATATGCCGGGGCCGGGGGAAATCAGGAAGGAGAAAGTACCCTTTTTTAAAAAGAAAATATAATTTCAATAGGTGCGAATCCCAAGTGAACACAAAATTCCAGGGAGATTCGCACCTATATTTTTATGGAAAAAGGAGGATAATTATGTTAAAATAAAAAATAAGGAATTATATATGTGTAATATTTGTGCAAGATGTTCTAAAACGATGTTGGTATTTTGGGAGATTTTGCT # Right flank : CAGCAATAAAACCAAATACCCAAAAAAGGAAAAATCCACTCTTTACAAATCAAGTGCAGAATAGAGCCATTTATATCAGCGCTGCATTTGGAGATACCGTAGTTGTTCACAAACAACCAATCTCCCGATTACGCAAATCCCCTTGACCATCATGACAAAACCCATTGACACCAGCAAAAAATCTAACTATAATAATGGCACAGTAACCCGGTAATTTACCTACAGCGTTGGTCGTTGGGCTGGCGCTGTTTTGTTATGCAGGATTTATTCTTGGATTTGGGAGAATATAACTGTCGGAGGATGAACATGGCAACAATCAAGGAAATTGCAAAGGCATGTAACGTCTCAATCTCAACGGTTTCTAATATACTAAATGGCAAGGAAAAGGCCAGACAGGAGACAAAGGAACTGGTTTTGCAGAAAGCAAAAGAGATGAATTACGTGCCAAATTATATGGCAAAAAATCTGAAACAAAAAAATACCAAAACAATCGGAATCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //