Array 1 249736-252202 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUBM01000004.1 Klebsiella pneumoniae strain 195C2 contig_0004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 249736 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 249797 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 249858 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 249919 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 249981 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 250042 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 250103 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 250164 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 250225 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 250286 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 250347 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 250408 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 250469 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 250530 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 250591 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 250652 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 250713 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 250774 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 250835 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 250896 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 250957 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 251018 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 251079 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 251140 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 251201 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251262 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251323 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251384 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251445 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 251506 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251567 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251628 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251689 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251750 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251811 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251872 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251933 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251994 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252055 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252116 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 252174 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //