Array 1 114966-112054 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFKI01000006.1 Legionella pneumophila strain C9_1 NODE_6_length_184269_cov_26.3975_ID_4135, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 114965 32 100.0 35 ................................ TTAAGTCTATAGGTTGGCTAGGTTTCATCTTTCCG 114898 32 100.0 35 ................................ CATCTCGCGGTGATAGGCTTTAACCCAGTCCGGGT 114831 32 100.0 35 ................................ TTTAAATCGTTTTTAATCACCTGATCATCTGTTTC 114764 32 100.0 33 ................................ AATTAAACTGGTTTCTATGTCAAAAAACAACAG 114699 32 100.0 35 ................................ ACTTTTAACGGCACAGCCGTAACCGGGATCACAGG 114632 32 100.0 36 ................................ AATGCTTTCATGGTGAACGTTGCTCTTGGCAAAGGT 114564 32 100.0 36 ................................ CCATGTGCCATTGCTATTAATGTAATCAACGATGCT 114496 32 100.0 34 ................................ ATCGCAATGATGTTGGCAGCAGTTAAAGGGACAG 114430 32 100.0 35 ................................ ATGTTCTTGTCAAACCACATTGCTATAGCACTTAC 114363 32 100.0 36 ................................ AGCGTACTCCATGAAATTCGTATAGAACCAATGCAT 114295 32 100.0 33 ................................ ATAATAATCTCACAACGTAAACCAAACTTTACT 114230 32 100.0 35 ................................ TAGTTTATCAGTAACGTCTATTCTTAGTGTATGGT 114163 32 100.0 35 ................................ ATGTATAATGATATTTGTCTGTGAGGGAAACCAAC 114096 32 100.0 34 ................................ CGGATACTTGGTATCACTTACTGCTATAAAATGG 114030 32 100.0 36 ................................ TAATACATTAATAATCTTGGCAGGGGCTTTTAGCGA 113962 32 100.0 34 ................................ TTCTTAATTCGATTGCCCATTTTTCGTGTTTAGT 113896 32 100.0 35 ................................ AATTATAAATCTAGCTTTGGATAAGGCCAAGTCGA 113829 32 100.0 35 ................................ AATGCCACAGTAAGGGCAACATGTACGCATATAGA 113762 32 100.0 34 ................................ ATGGCAATGATGTTGGCAGCAGTTAAAGGGACAG 113696 32 100.0 37 ................................ CGATTGCAGCAAGCGGTTACTTCAATGCTTTCATGGT 113627 32 100.0 34 ................................ TCAAGAAAATAGTAAATGTGATTTATATTGTAGT 113561 32 100.0 36 ................................ TTGTTTTAGGAAGTTTGAAAGGATTGTTTACAGGTG 113493 32 100.0 35 ................................ GAAACTGGATTGTTATTTAAAGCCCGTCCTGATGC 113426 32 100.0 35 ................................ CTTTGTATGGCTGATCAACATGTTTCGCTGTCGTT 113359 32 100.0 34 ................................ TTCGTAAATCTCAGGTACATTTATGTCATAGGGG 113293 32 100.0 36 ................................ AATTACAATTAGTTAGGGATAGGACTAGATTTATTG 113225 32 100.0 34 ................................ TTTATGGCCCGCCCAAGGTGTGGCTATAGGTCCT 113159 32 100.0 35 ................................ TAGTTTATCAGTAACGTCTATTCTTAGTGTATGGT 113092 32 100.0 34 ................................ TCACACCACTCACCACTATTTATATATGATTTAC 113026 32 100.0 35 ................................ ATGGCCTAGTTGGATCAGGGAATTGCTAATAATTT 112959 32 100.0 36 ................................ TTGTGTCTCTATGTGAATTAAGAATAGTTGTCTTAG 112891 32 100.0 37 ................................ GGAAAATGATGATGAAATAGCTCTTGTGATAGGGCAT 112822 32 100.0 35 ................................ ATTTTATAGGCTCAGAAAATAATGATTGGGTTGTT 112755 32 100.0 35 ................................ AAGCAAAAACAAGGGTTACAAAAAGAAGCCTTGGA 112688 32 100.0 35 ................................ ATCTAAAGAGAGGTAAAGTAATGACTATTGAAGAA 112621 32 100.0 36 ................................ TTATCTAAAGCAATAAACTCTTGACGCAATGCTGTC 112553 32 100.0 34 ................................ ATATTTCGCAAACTTATAGAATGAATGTAAAAAT 112487 32 100.0 34 ................................ CGTCGTCTAAGACATTAAAAACTAGAGTTTTCAT 112421 32 100.0 34 ................................ AGATAACTTAGATTTTACGCGTTTGTATTTAACT 112355 32 100.0 37 ................................ ATAGGTATAGAAAAAGAAGAAAAATATTTCAATATAG 112286 32 100.0 34 ................................ ATCCCAAGGTAAAATAGCTTGCACATCATCATTC 112220 32 100.0 36 ................................ TTTGAGTTTGGTGATTAGGTCGTCAATGCCAATAGG 112152 32 100.0 35 ................................ AGGAATAGCAATTGTGTCAAATAGAAAAGTAGACG 112085 32 90.6 0 ...................T.C........T. | ========== ====== ====== ====== ================================ ===================================== ================== 44 32 99.8 35 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : AATTTTATACTCCTTATTTAGTGAAGTAATTATGTTTGTAGTAATAACTTATGATGTTAATGTAACAACTTCTGGTGGGCAGAAACGTTTACGGAATATTGCAAAAACATGTCTTGATTATGGTTTTAGAGTGCAAAACTCTGTATTTGAATGCGAAGTTGAACCTGATCGGTTCGTTGCGTTAAAAAATACACTTTTAGAGTTATTTGATCCTGATGCTGATAGCTTACGATTTTATTTTTTAGGCAAAAAAGGGAAGGATAAAATCGAACATTTTGGAGCTAATAAGGTCATCGACCCCTTGAGAGATCCACTGATACTGTAATTCGCTAACTTGAAGTTCTCATATTTTTACCGGTCAATTATCGGATTATAACCACTTGATATTTATATTTTTTTTTATGTGTGCTTATCAAGCTAATCAATAAATATAATTTTTTATTATTATTAGCGATATTTAGCATTTTTTTCGATATATTTCAATATGCTATAATCATACT # Right flank : ACGGGTAGCATGAGTTTTTTAAGTGAACAAAAGCGTCGCGTTTAGCAAAGATAGTATGAATAAATTTTAATTAAAATGAACTTGATGTGAATTGTTACAAACATTTCATATCGATTTTAGGTATATTTAGCCAGAAGCTCTTTGTCTTTATCTTTGACTTTGATATCTTAAAGAAGAAGTTCCAGATTTTTTACAAGGATGTGAATATGTCTGACTTACAACAATTGCCTAAGACTATCCTGAGATTTTCCTGGCATTTTATAAAAAAAAGTCCCTGGCTTTATGCTTTATTTTTCATAGCACCAGTGGTGATGGTGCTTGAAACGAATGTGATTCCCTATGCTTTAAAAATGATTATTGATGGGATAACAAACCATAAAGGGGGAAAAGAAAGCATATTTCAAGACATCGCACCGGCTTTGTATTTGGGTGGAGTTGCCTGGTTTGGTGTGATTCTGGTGTTGCGCTTGCATAATTGGTGGCAAGCCTACCTTGTTCCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //