Array 1 354-1424 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NXGF01000013.1 Mycobacterium tuberculosis strain D8788 TB1-2.fa13, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                            	Insertion/Deletion
==========	======	======	======	====================================	===========================================	==================
       354	    36	 100.0	    43	....................................	TCGAAATCCAGCACCACATCCGCAGCTGCGGCATGCTCCCGAA	
       433	    36	 100.0	    36	....................................	GCGAGGAACCGTCCCACCTGGGCCTGCCCCCAGCGG       	
       505	    36	 100.0	    38	....................................	TCAATAACACTTTTTTTGAGCGTGGCGCGGTTGAGAGT     	
       579	    36	 100.0	    38	....................................	ACGGAAACGCAGCACCAGCCTGACAATCTTATTCTCGC     	
       653	    36	 100.0	    37	....................................	ATTTTGAGCGCGAACTCGTCCACAGTCCCCCTTTCAG      	
       726	    36	 100.0	    35	....................................	GCCCCGTGGATGGCGGATGCGTTGTGCGCGCAAGT        	
       797	    36	 100.0	    40	....................................	CCGACGATGGCCAGTAAATCGGCGTGGGTAACCGATCCGG   	
       873	    36	 100.0	    38	....................................	TAGTACGCCATCTGTGCCTCATACAGGTCCAGTGCCCT     	
       947	    36	 100.0	    35	....................................	CTGACGGCACGGAGCTTTCCGGCTTCTATCAGGTA        	
      1018	    36	 100.0	    36	....................................	CCTCATGGTGGGACATGGACGAGCGCGACTATCGGG       	
      1090	    36	  97.2	    37	......G.............................	TGGACGCAGAATCGCACCGGGTGCGGGAGGTGCAGCA      	
      1163	    36	 100.0	    40	....................................	GCATATCGCCCGCCACACCACAGCCACGCTACTGCTCCAT   	
      1239	    36	  97.2	    40	...C................................	ACACCGCCGATGACAGCTATGTCCGAGTGACATCCTCCCA   	
      1315	    36	  97.2	    38	..................A.................	TTGAACCGCCCTTCGCGCGGTGTTTCGGCCGTGCCCGA     	
      1389	    36	 100.0	     0	....................................	|                                          	
==========	======	======	======	====================================	===========================================	==================
        15	    36	  99.4	    38	GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                           	       

# Left flank :   TTTTCCCGCCTCAAGCGCTTCAGCTCAGCGGATTCTTCGGTCGTGGTCCCGGGCCGTGCGCCGGCATCGACCTGCGCCTGGCGCACCCACTTACGCACCGTCTCCGCGCAGCCAACACCAAGTAGACGGGCGACCTCACTGATCGCTGCCCACTCCGAATCGTGCTGACCGCGGATCTCTGCGACCATCCGCACCGCCCGCTCACGCAGCTCCGGCGGGTACCTCCTCGATGAACCACCTGACATGACCCCATCCTTTCCAAGAACTGGAGTCTCCGGACATGCCGGGGCGGTTCAGAGAGGGGACGGAAACCTGCATCCGGAAAGTCCGTACGCTCGAAACGCTTCCAACGTG
# Right flank :  CTACGACGACTGGGTCGCCACCGCGTCTGTTGACCGGCATTCAGGATGAGCATGATGGCGGCGTTGACGGTGAGGACGTTTGGTCATGAAATGACCCCGCCGGGAGATGTCCGGCGGGGTCGGTGGTGTTCGGGGTGTCGGTGTGGTGTTCAGTCTGCCGTGACTTCGGCGATGGCGGTGCGGGTGGTGGATTCGTCGACGATGGCCTTGTCGGCGGCGAAGGCGGCGACGAGGGCTTGCAGGGCGAGGTTGTTGACCGCGCGGGGGTAGCCCCGGCTGGTCTGGTGGATCAACCCGATGGCGTCGTCGGAGAACAGGGCATCGTCGCGTCCGGCTAGCTTGAGGTGGTGGCGTAGGTAGCTGCCGGTGTTGGTGTCGGTCATGGGCGGCATGGCATATCGGAGTCCGATGCGCTGGTCAAGCGCGGCGAGCACGCCGAGTTTCATCCGCCGCCGCAGGGTGGGTTGGCCGATGAGCAGGCAGGCGAACGGGCTTGACGA

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [12,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.70,-6.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.15,0   Confidence: HIGH] 

# Array family : NA
//