Array 1 7279-5977 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHNQ010000011.1 Klebsiella variicola strain 16KE 16ke_contig_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7278 28 96.6 32 .....-....................... TCCGGATGATGACATTTCGGGTGATAATCATA 7218 28 96.6 32 .....-....................... TTCTCTCCGCCGGGCAGTGTGATGCCGGAGGG 7158 29 100.0 32 ............................. GCAGCGGCCTGACGATGATCGATATGAACGGC 7097 29 93.1 32 .............A...A........... TGAAATTGACGAGTGGATCAATCAGCGTATTG 7036 28 89.7 32 .....-......TA............... TCACTTTTGCGTCGAGCCAAGTTATTATCTCA 6976 29 93.1 32 ............TG............... TAATTTAGGAAATGAATTCTAAAATTGAATCT 6915 28 93.1 32 .....-.......A............... TGAGGCTGCTGACGGAGAATTGGGACCTGTTC 6855 29 100.0 32 ............................. TAAGCTGATCGTTGCCGTAATGCGAAGCGGGA 6794 29 100.0 32 ............................. AACAGTGGGATTTCACCTTTTAGGTTGAGTCA 6733 29 93.1 32 ............TC............... TGACTTTTGATGAGATTTTGTCGATAAAAATT 6672 29 89.7 32 .............G.A............T TCGATGGCAACCACCAGGAACAATAGAACCCT 6611 29 86.2 32 .A......T...TC............... AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG 6550 29 93.1 32 ............TA............... TCACTTTTGCGTCGAGCCAAGTTATTATCTCA 6489 28 93.1 32 .....-.......A............... GCCATGCAACGTCTGAACGTCCGAAACATCCC 6429 29 96.6 32 .............A............... CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 6368 29 100.0 32 ............................. TCGAAGGCAACCACCAGGAACAATAAAACCCC 6307 29 89.7 32 .A..........TG............... CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 6246 28 89.7 31 .....-.......G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 6187 29 93.1 32 .............A............T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 6126 29 93.1 32 ............TA............... TCGCCCAGTCCAAAGGGGATGATGCAGGATTG 6065 29 100.0 31 ............................. GGCATGAGCGCGAACCACTGCGAGAGTGTGG 6005 28 72.4 0 TGTA.T.......A.........-....A | A [5994] ========== ====== ====== ====== ============================= ================================ ================== 22 29 93.3 32 GTATTCCCCCCGCTTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTACGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTACATTAATCCGCTTTGCAGCCGAGCCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTGAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGTGCTATTTATTATTTTATAATCAACCGGTTATTTTTAGA # Right flank : CATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGCTAGCGTTAAAGGAACATTTAGCCGTGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTATTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACATGATCGGCTTTTCCGTCACATTCATTCAGCTCAGCACCAAAATCACCGCAAACTTCACCTGCATACTGATTTACTTTTTCCAGATGTAACTCACCGAAAAC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCTTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //