Array 1 1940-703 **** Predicted by CRISPRDetect 2.4 *** >NZ_SAUW01000003.1 Sinirhodobacter populi strain 2D-5 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1939 32 100.0 35 ................................ AAGTGCTGGCTGGAAGGCTTCGAGGAAGCCAAAAG 1872 32 100.0 34 ................................ TCGGCGATGATGGCGGTTTCATTCCTGATGCTTG 1806 32 100.0 33 ................................ ATGGAATCCGTCTGCGTGAACGTCTCGCCGGTG 1741 32 100.0 34 ................................ GCGAAACCGGCTTCGCCTTGGGAGGATCCGGAAC 1675 32 100.0 37 ................................ GGCGGATACGATCCGCATCACGGTCAGCGATCCGCAG 1606 32 100.0 37 ................................ CGCCATCATGTCGGGGATCCGCTCCGCCGTGGCCCGC 1537 32 100.0 35 ................................ AGGTGTTCCAGACCGAGCATGTCGCGTCTGGCCTG 1470 32 100.0 35 ................................ AGCCTGTCGGAGCGTGACCGCAACACTGAGCGCGG 1403 32 100.0 35 ................................ CGACGCAGAAGGCGGCAAAGGAGTGGGCGTCCCGT 1336 32 100.0 34 ................................ GGTGACTTCGCGCGCACCTATCAGATCGTGGATC 1270 32 100.0 34 ................................ ACCCGCCACGCCTGCGGCATGATACAGCGCCCGA 1204 32 100.0 36 ................................ CGCGTCAGGTAGGCCGCGATGCGCGCTTGGGTCGGC 1136 32 100.0 36 ................................ CGGTTGGTGTAGTAGCCACCTGCGCGCAGCGGGTAG 1068 32 100.0 35 ................................ TGGGCACCGACGGCCAGATCCTCGGCGATCGGGAC 1001 32 96.9 34 ..........G..................... GCTGGGGATCGCCGCCGGCAGCACCAACAAGGGG 935 32 96.9 35 ..........G..................... CTTGATCGTCTGAGCAATCAGGACGGAAAGACGCC 868 32 96.9 35 ..........G..................... GACACCGACGAACTGAGCGTGACGCTGGATATCGA 801 32 96.9 35 ..........G..................... AGCATCGCGCCGAGGTAATCAGAGCCGAACCGCTG 734 32 71.9 0 ..........G..T.........AGCGCC.G. | ========== ====== ====== ====== ================================ ===================================== ================== 19 32 97.9 35 GTCGCGCCCCATGCGGGCGCGTGGATAGAAAC # Left flank : TGGACGGCTATCCCGCCTGGATCTGGAGATGACATGCTTGTCCTGATCACCTACGATGTGCGCACGGATACGCCTGCGGGCCGCAAGCGCCTGCGGCGCGTCGCCAAAGCCTGCGAGGACTATGGCCAACGGGTGCAGTTTTCGGTATTCGAATGCGATCTGGACCCAGCGCTCTGGACATCATTGCGCGCGCGCCTGATCGGGTTGATCGAGCCGGAGCATGACAGCCTGCGGTTCTACATGCTTGGTGCGAACTGGCGATCCAAGGTGGAACATGTCGGAGCCAAGCCCGCGACGGACTTCGATGGCCCTTTGATTTTCTGATGTGCGAACCGCAAGCGGGCATGAATTCCCCAGGATGTTCGCGGAACATTTATATCTTTCTTTTCAATATATTGAGAATATGCATTCACCGAAAGAAGCCTAAATTCATGCCTCAGGCAATGGTTCGCAAATCTCGCGACAATTGACTCAAGCGCCCAGGCATTTAGTTAGGCGGG # Right flank : TTGTTGCTGCCGCCGTAGTTGGCGGGGTCGGTCGCCAGCGCGGCCTGTTCGATTTCCAGCGTCAGGGTGAAGCTGTTCATCAGCGTGTTGACCACGCGCTTGCCAAGGTCGATTCCCGGCACGGTTTGCGCATCGCGCACAAACTCGCGCAGGATATCGGTCTTTCCATAGATGCCGAGCACCGCGTTCTTCAAGTTCGAAAGGCGGATCGCGGAGTCTTGGGTTTCGGCCTTCGCGCGTTGCAGCACACGTGCGAGGTTGCGGGCATTGGTCTTGCTGCCGAGCGCGCTGATCGCCAGACGGGCATCCTCGCCTTCGGCGCAATAGGCTTGTGCGAGCTTGTCGCAATCCTCACCGTCAAGGTTCGGGAGATGAACCGTCATGCCGATCCGGTCATTGATCTGTTGCAGGGCGCGTTCATCGCGCTTGCCCGCAGACCTGCGGTTGCTCGATTGATCAGCCCCACTTGAGTGGTCCATTTTGAAAGTTAGTGGATGACC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCATGCGGGCGCGTGGATAGAAAC # Alternate repeat : GTCGCGCCCCGTGCGGGCGCGTGGATAGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGATAGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.80,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //