Array 1 44178-42466 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAE010000002.1 Psychrobacter lutiphocae isolate Psychrobacter lutiphocae IMMIBL-1110, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 44177 28 100.0 32 ............................ TACGTCTTCCGGCATCTTCTCTCTGTGTGTAG 44117 28 100.0 32 ............................ TCACGGCATACCAACTCAAAACCAAGTTGATT 44057 28 100.0 32 ............................ TTAATCACTTTATGCTTATAATTATATTATAT 43997 28 100.0 33 ............................ CCCGAACAGCTACCAACTGTTCGAGGGATTCTG 43936 28 100.0 32 ............................ TAACTGTTTATTAATACTACTCCTTGAACCTT 43876 28 100.0 32 ............................ CACAGCAAGCAAATGGGGCAAACACTGCTTGA 43816 28 100.0 32 ............................ TGTTCTATAATTCTCATAATCTATTACTCCCA 43756 28 100.0 32 ............................ TCTACCGTGATGATTTTAGATAGGGTTTCTTG 43696 28 100.0 32 ............................ TCCTGAGGATATAGCTCATACTGAGCAAAGTC 43636 28 100.0 32 ............................ ACTCGCAAGCTGGAACGCTTGGAAAGCGGTAG 43576 28 100.0 32 ............................ AATGCCCCTAGAGTCTTAATAGCTTTCACATC 43516 28 100.0 32 ............................ AGTTTTACGATGCGCTTAGCACAACTACTGTA 43456 28 100.0 32 ............................ AATCGTGTGATAGACCTTATCGAATTCACCTT 43396 28 100.0 32 ............................ TTTGAGGTTGTTGATAGCAATGGTAGTGTCCA 43336 28 100.0 32 ............................ AACGTGGATTTAAAACATGGGCGAGCCTTCCA 43276 28 100.0 32 ............................ ACCTGATTCAGGGCTGTAAGCGACGTTTATTC 43216 28 100.0 32 ............................ AGTATTCATAATTGTTAATATCACAAACTTGG 43156 28 100.0 32 ............................ TCAAGCGAATTGGTGGCGATTGCAAATACAGA 43096 28 100.0 32 ............................ AAACGAATAAACACCTTCACTCTCACTATCAT 43036 28 100.0 32 ............................ TATCGACGAGCAAGAACGCATCAAACGCAAGC 42976 28 100.0 32 ............................ GACCAGCATACGAAAAGCAGTCGCTCTAAACC 42916 28 100.0 32 ............................ TTACCCTTAGTTGATATGAATATTATATTCCT 42856 28 100.0 32 ............................ ATGAGTTGATTTTGGTTTGATAGCTTGGAATT 42796 28 100.0 32 ............................ TGCTTTGAATTTAGTGACCTTCACAAAGACGA 42736 28 100.0 32 ............................ CATCTGTTGTTGCTATTACCCAGTCTGTCCAG 42676 28 100.0 33 ............................ TTCAATCAGTGCATTAGACTTTGATATAACAAT 42615 28 100.0 32 ............................ ACACGTCAGCAGGGACTTTGTATTTTTTTAAG 42555 28 100.0 33 ............................ TGCTTAGAAAGTGAATCTAGCTTTGAGAAGTTA 42494 28 96.4 0 ..........................G. | T [42470] ========== ====== ====== ====== ============================ ================================= ================== 29 28 99.9 32 CTTCACCACCGCACAGGTGGCTTAGAAA # Left flank : CATAAAAGATGTGCCTGATAAAATAGAGGGTTACTTAAGCGTTCATCGCTACCGCTTTAAACCAGTTGAAATACAAGCAAGGTCATTGGCTAAAAAATTAGGAATTAGTTTAGATGATGCGATGGCAACAATCGCTAAACGAAAGCCCGAAAAGCCAGTGCCCTACATTAGGCTAATGAGCGAAACCAATAAATCGCCATATATGCTTAAGGTATTACAACAACCTGCTGACAAACCAACACTGGGAGAGTTTAATACTTATGGTATGAATGGCATGAGTGATAATATCACTGTACCACATTGGTAAAATAGCTTTTATAGTTATAAAACTAGGTAATGACGAATGACCCAAAAAGAGGATGTAAAAAACCCTCTTTTTGACCTATTTAAAAACTTGTAATAGAATCAAAGAGTTATGATATAGTCAAAGAAAGAGGGTAAAAACAGGGTTTTTACCCTCTAAGCATTGTCATAACTCACTTTTTTGAGGTATAATTCCT # Right flank : GCCGTTAAAACCACTTGAAATTAGCCACTGCAATTTAACTTCGAGCATAGCTCTACGTCTTGCGCATCGGGCAAGTATGCCCCACATACTTGCTATTCCTCGCTCACGCAAGGGAAATCCTTTGAATAGGATTTCCAAAGAGTCTAACACCCAGCTAAACTTGATAAAATAAAACCACCGCACAGGTGGCTGGTTGCGTTCGTTTGGATACTCTGTGACCTTTTATGTTGAGGCTTTGAGTGTGAATTGAAGGTGCGGTTTAGCCTCGATTGTAGCGGTTATCCTTGGGTGACCACTGGCTTGCAGTGACTTAGCTAGGTGTGGTCGCTCGAATGTTGGAACATGCCTAGCGAGTAGTCACTGCGCCAGTGGGTGCGCAAGATAATAGCGAAAAGCGAGATTGGCTCTTGTTATATTTGGTTAGGTTTAAAAAAACCTGCCTTGATCTCAAGACAGGTTGTTTGTGATGATAAGTGTTTGGGGGTGGTTTAGGAGGCTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCACCGCACAGGTGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1589323-1590490 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAE010000001.1 Psychrobacter lutiphocae isolate Psychrobacter lutiphocae IMMIBL-1110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1589323 28 100.0 32 ............................ TTGGTGATCAAATAATCCGATTGAACCTTGGT 1589383 28 100.0 32 ............................ AACCCCTCAGCGTGGAAGGACAAGCTTATTGG 1589443 28 100.0 32 ............................ AATGGACTAAAACAACATGAACAAACAGCTAT 1589503 28 100.0 32 ............................ ATTTGCCAGAAGTAATTAGGGTTATGCTCTGC 1589563 28 100.0 32 ............................ AAGAAAAGACCAGCACAAATAAATATGATGGT 1589623 28 100.0 32 ............................ AATTAATGTAGAACTGGTCATCGACACGCTTA 1589683 28 100.0 32 ............................ CTTTGTGCTAGCTGTCTGTACTTTGTCATCTA 1589743 28 100.0 32 ............................ AATGATAACTAACTGGAGTAACAGACATGAGT 1589803 28 100.0 32 ............................ TTTGACTTAAATGATGAATTAAATTGCTAATG 1589863 28 100.0 32 ............................ ATCATTGGTTTATTAACTCGAATAGTTGTATG 1589923 28 100.0 32 ............................ TAGTGATATGGATGAAATGTTATTGTTATTCA 1589983 28 100.0 32 ............................ TTTTAATTAATGGTCTCTGTTGACTATGAGTT 1590043 28 100.0 32 ............................ GTAATCAGATGTTACTATATTCATTGCTATTG 1590103 28 100.0 32 ............................ TTGGGTCATTAATGCGTTTGAGTCTGTAAATA 1590163 28 100.0 32 ............................ CGTTACTGTTTTATTAAACTCAAACCCTTTTT 1590223 28 100.0 32 ............................ AAAGACAAAGCGCAGACAGACTTTAATAACTT 1590283 28 100.0 32 ............................ ACAGATGCAATAAGTGTAGGTTTGGGTAAGGG 1590343 28 100.0 32 ............................ ATCGAATTACTACTCACTGAACGTAGTGAATT 1590403 28 100.0 32 ............................ ATCCATAATCAGACGCTCCATGCTGTCACCAC 1590463 28 89.3 0 .........................CTT | ========== ====== ====== ====== ============================ ================================ ================== 20 28 99.5 32 GTTAACCACCGCATAGGTGGCTTAGAAA # Left flank : CCGCTGTCATTAGATAAGCAGGCATTATCTGATTTATTGACTATGACTCCGTATTCGTATCGTGCCAAAGCAGAGAAGCGTGAGGCCTTGTTGGCGTCAACCGAGCGTCAATACTTTGAGACCACAGCGAGGTTTGTGGTGTATGAGTTGGTGAGGTTGTAGTCAAATTTGGTTTGCTTGCCATTGGTAGGTCGTGTTTTATTGTCTAGATATAGTTAGGAAAGGAAAAGTCGTTAGGGGGTTGACCTGGTTAAGCCTGCTGTTGTCGTGCTTGTACTGGGTTGGTTTGTAATTGCTTTGGTTCTTTTTGACTGGAGTTAACTATTTTTGGTTATAGCTTTGGTCTTGACCTTGGTACTGCTTAAAAAACCCTTTTTTTTGGTTGCTTGAATAAAGTTAATAAAATCAATGTGTTATATTCTAGCAAAAAATAAAGGGTAAAAGTGGGTTTATCAGCCTTGAAGCACTGTTGTTACTGGCTTTTTTAAGCTATAATTCTA # Right flank : TAATAGGGTGCGATCCATGCACCGACATCAAATAAGTATTGCGTTAATGGTGCGCACTGTAAAATCTTATCAGCGTGTAGTCTTAGCTTTTTTGATGTGAGTGTGGTCTTGGGGTGCGGTTTAGCCTCGATTGAAGCGGATATACTGGCGTAGCTCATGGCGATGCGGACTGTGGCGAGAGGCGGTGTCGTGGTAGCAGTAACGACTCTGGTCACGGTAGTCCGCACGCCATGAGCAAGACAGATAGTAGCGAAAAGCGAGATTGGCTCCGTTAGTTTATAACGGTTTATTGCTAGTTGTTTATTTGCAGTTGCTCACTATCTGGGTCTGTCGTTATCCCCTAGGATGATGCGCTTCATGCAGCTGCTGCAAGCGAGCAGTGGCGACATGGGTGTAAATCTGTGTAGTGGATAAGTCGCTGTGGCCAAGTAACAGCTGTACGCTACGTAAGTCGGCACCATGATTAAGTAAGTGAGTGGCGAAAGCATGGCGTAAGCTGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCACCGCATAGGTGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTAACCGCCGCGTAGGCGGCTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1891088-1889678 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAE010000001.1 Psychrobacter lutiphocae isolate Psychrobacter lutiphocae IMMIBL-1110, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1891087 28 100.0 32 ............................ AGTGAGATCATTAACAAAAAGCCGTTAATGTA 1891027 28 100.0 32 ............................ AAAAAGACAAAGGTTCGGCAGTCGAAAATGAG 1890967 28 100.0 32 ............................ TGCTGATCTGTCGCTTTGCTTAGCTTGGGCTT 1890907 28 100.0 32 ............................ GATATCATCATGCCGTCATCACTTCAAAATGT 1890847 28 100.0 32 ............................ TAGTAGGTAGTTCATGGTAGCTTTTGCTGTTC 1890787 28 100.0 32 ............................ AGGAGTAGGGTGGTAATAATCCATAGGCAAAG 1890727 28 100.0 33 ............................ CATAAAATAATGATATAATTTCGGAGTGCGATG 1890666 28 100.0 32 ............................ TGAAAATTCCGCTTATCGCCTTAAATGCCCTT 1890606 28 100.0 32 ............................ AAATTATTTTCCAAATCATAAGCGTCTATTTC 1890546 28 100.0 32 ............................ TGCTGTTCACAAACACGCTTGAATGAGTTTGC 1890486 28 100.0 32 ............................ CGATAAAGGCGGTGATACTGCCACTTGCCAGG 1890426 28 100.0 32 ............................ AAAAAGACAAAGGTTCGGCAGTCGAAAATGAG 1890366 28 100.0 32 ............................ TGCTGATCTGTCGCTTTGCTTAGCTTGGGCTT 1890306 28 100.0 32 ............................ ATCCGACTCAACGTGTGCGCTTAATGCGTCGC 1890246 28 100.0 32 ............................ TAGTAGGTAGTTCATGGTAGCTTTTGCTGTTC 1890186 28 100.0 32 ............................ AGGAGTAGGGTGGTAATAATCCATAGGCAAAG 1890126 28 100.0 33 ............................ CATAAAATAATGATATAATTTCGGAGTGCGATG 1890065 28 100.0 32 ............................ TGAAAATTCCGCTTATCGCCTTAAATGCCCTT 1890005 28 100.0 32 ............................ AAATTATTTTCCAAATCATAAGCGTCTATTTC 1889945 28 100.0 32 ............................ TGCTGATCTGTCGCTTTGCTTAGCTTGGGCTT 1889885 28 100.0 32 ............................ GATATCATCATGCCGTCATCACTTCAAAATGT 1889825 28 100.0 32 ............................ AGTAGTCGCCTCTTTCATCGTCTCATTAAGAC 1889765 28 100.0 32 ............................ TTGTGGGTAAACCGCCTCGATGTTTGCATATA 1889705 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.9 32 CTTAACCACCGCACAGGTGGCTTAGAAA # Left flank : ATGGATAGTAAGTTACCCATTGTATCGACCACAATATGGCGTTTACGACCCTTTATTTTTTTGCCGCCATCAAAGCCTGTATCATGTGCTTTACTGGCTGTTTTAACGCTTTGAGAGTCAATGATAGCGTAACTTGGTTCAGCATCCCTTTTGGCTTTTAATCGCTTTTTTTAACCAAGTCTTGTAGTATTTTGTCCCATAGACCTGAGTGATTAGCTCGCCTAAAGAAACTCCATACTGTGGTGTAAGGCGGAAAGTCATTAGGAAGCAGACGCCACTGACAGCCTGTCTTTGTGATATAGAGTACCGCATTGACTAGCTCTCGCTTGTCCCATTTATAGCGCCGATGATGGCTAAAGTGAGGTTCAATGCGTCTCCATTGCTCATCGGTTAAGTCGGTTGGATATATCTTTCTATTCATGTGAGTATTTTAATTTACTTATCCTTGTGAATACAACTTCTTAGAAATTGTAAAAATGGCGCAATGCAGAATGGTCGTT # Right flank : AGTCATAGCTTTCATATAAATTCACATACATTGCTGCAAAGTATTTAGCGACCTCTTCACCATAGTCAGATTGAGCATTTTCTAGCATTGTTACAATATCTGTTTGACCAGTATTATTATCTACACGTATCACGTATGGGCGCACTTCTTTAAACGGAGTTAAAAGTATCAGCGCTACAGCACATACTATCGCTAAAGCACACGCACCAAACGCTACTTTCCAAGCAAGATTTTTGCTTTTTTCTAGTTCATCAACTCTACTTTCCTCAAACTCCTTTGCGGCTTTTACAAAATCATTAGATGCTTGACGAGCTGTTACTTTTTTTGGTTTTTTAGGTTTTTCAATTTCTGTATTTTTTTTCTTTGTCTTAAACAACATCACTAGACTCCTGTTTTTCTTGATCTACTTCTGCTTCTGCTTCTGCTTCAGGAATAAAAACATCAACTCCATCTGTAAAACGCTCAACATTCGCTGGTACAAATCCTTTTTGGTTAATCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACCACCGCACAGGTGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 3 1894307-1891938 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAE010000001.1 Psychrobacter lutiphocae isolate Psychrobacter lutiphocae IMMIBL-1110, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1894306 28 100.0 32 ............................ CCTAGCCCTCACTGCTATACAGCAAAGGTCTG 1894246 28 100.0 32 ............................ GTTTGAGGTGGTAGCAGACTCTTTTAAACCTA 1894186 28 100.0 32 ............................ TCTCGTATTTTCCACTCCTCTTGTTCTAAGAG 1894126 28 100.0 32 ............................ CCGCATATCCCTACACATAGGGAGAAGACTAG 1894066 28 100.0 32 ............................ CTATAACCGAAGATTCTATCACCAAGTTATAC 1894006 28 100.0 32 ............................ AATGCAAGATAGATTAAATTTCTTGCCGATGC 1893946 28 100.0 32 ............................ AAGTACAGCAAGCCCTGACGACACAGCAAGAC 1893886 28 100.0 32 ............................ CTAAAGCATTTGAAATGAATTCAAATACTTTA 1893826 28 100.0 32 ............................ TACTACGATAAGGCAGACCGCCCACTGGTTGA 1893766 28 100.0 32 ............................ CTGTGCGTGCAATGCTTCGGCTTGTTGTCGCT 1893706 28 100.0 32 ............................ TTATGTAAATGGTCGCCTGTTCTCAAGACAAT 1893646 28 100.0 32 ............................ AATAGGATGTTTATCTATATCAACATCTGTTA 1893586 28 100.0 32 ............................ TTGCGATAGTTGATCGACATCATGAATTTAAA 1893526 28 100.0 32 ............................ CTGACGGCACAGCAGGACACGATACAGCGACA 1893466 28 100.0 32 ............................ AAAGACTTAGTTAACAAATATGGGGTAGCGGT 1893406 28 100.0 32 ............................ TTAAATAAAAAAAATAAAAAAATAAAAAAGTC 1893346 28 100.0 32 ............................ AGCTCTGCTCTAAGCTTATTTTTATTAGTAAA 1893286 28 100.0 32 ............................ TATATTTGCTAAAAGATCGGCCCAGCGAGCTT 1893226 28 100.0 33 ............................ TATAAGGCTTGATGGAGTCTGTATCTAAATAAA 1893165 28 100.0 32 ............................ ATTATTTAACAAGTCATACCGCTGTTTGAGGT 1893105 28 100.0 32 ............................ TGCTTGCGCATACTTGCTTTTTCGATAAAGTA 1893045 28 100.0 32 ............................ GTGCTTATATTCTTTGTTAAGCTCGTCTAGTA 1892985 28 100.0 32 ............................ AACAACTACACGACTAGCCGTTGATACTCATG 1892925 28 100.0 32 ............................ ATGAACGGCATTTTTTTCTAAAGCGTCAACAA 1892865 28 100.0 32 ............................ AACTGGGTAAAGCTCAGAATGCAACAGGACAC 1892805 28 100.0 32 ............................ ACTTAAAGACGAAGAAATTTAAACAAACAAAA 1892745 28 100.0 32 ............................ CAATGCGTATAGCGTAGCCTTGGCTTTAGATT 1892685 28 100.0 32 ............................ TTATCCAGTATTTAGCAGAGTCGGTTATTGCC 1892625 28 100.0 32 ............................ AAACGGCAGTGGATTGTTTTCACCAAATCTGA 1892565 28 100.0 32 ............................ TTCAAGGGGGAGACGCAGCAGGGTTAACGTCC 1892505 28 100.0 32 ............................ TACGGTATCGTCTACCAATAGGGCTTTTGACG 1892445 28 100.0 32 ............................ TACTGTATAGATGCACCTACAAAACCGCCAAA 1892385 28 100.0 32 ............................ ACCAATGGTGGAGATTAAAACAGCGACACGCC 1892325 28 100.0 32 ............................ TCGAGGGTATTGACAACACATTACCTAGCAGG 1892265 28 100.0 32 ............................ TCTGTTTGCTGTCTGATAGACTCATGGCAGCA 1892205 28 100.0 32 ............................ TTGTAAAAATGGCGCAATGCAGAATGGTCGTT 1892145 28 100.0 32 ............................ TAAGCAGTTAACGCTAATCTTGTGGGGGTGGA 1892085 28 100.0 32 ............................ TTGCAGCGCAAGACGCTCTCTTGCTCGTCTGG 1892025 28 100.0 32 ............................ TCGCCTTTATAATACCGTTTTTTTGCAATCTC 1891965 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 40 28 99.9 32 CTTAACCACCGCACAGGTGGCTTAGAAA # Left flank : TCAATCCGTATCCGCTCTCTACTGTATGTCAAAATTAGGGAAAAATGCAACTTTAATTGTGCTGTTCATCACCGAATCCAAGTGGTAAACCCACCCATCTACTCGCTCAAGGTGTTACAATAACCAGCCTGTTGATAAAGCAACAGCAGGAACCTTTAGTAACACCTTTTCTGAAAAATAACCTATCTTTGTCAAACTCGCTAAACCTACTAATTATAGCATTTGCTCTCGTTTTCCTCGATATCTTAATTTTTAGATTTGGTATAACTATGGTATGAGTAAAATGCACGGTAGTGTCACTGTTCTACATTTTTAAAAATATCATTAAATTGGTTGTGACGAATGACCCAAAAAGAGGAGTAAAAAAAACCCTCTTTTTGTACTATTTAAAAATTTATATTTAAATCAAAGAGTTATAATATAGCTCAAAAAAGAGGGTAAAAACAGGGTTTTTGCCCTCCAAGCTTTGTCATAACTCATTTTTTTGAGGTATAATTCCT # Right flank : CTGTATTCACAAGTTAAAGAGTCCTTAATATGAGATGGATGTGAGCCAACTTAACGAAATTCTCAGCAGAGGTCACAGTAACTTCGAAATCCTTAGCAAGACGACGTGAGTTATTTAGCCAAGCAAAGGTACGTTCAACAACCCAGCGTTTAGGAATAATCTGCCAAGAACCTGCAATCTTAGTTGAGATATCGACAGGTAACTTAAAATCTTGCATCATTTGTTCCTCAAAGGTTCTACGATAACCTGCATCAGCAGATACGGCTTTAATAGTAGTATAGACACTAAGTAGTTTTTCTATGGCTAACTTTCCTGATTTGGTATCGTGAATATTAGCAGCATGAACGACAATGGATAGTAAGTTACCCATTGTATCGACCACAATATGGCGTTTACGACCCTTTATTTTTTTGCCGCCATCAAAGCCTGTATCATGTGCTTTACTGGCTGTTTTAACGCTTTGAGAGTCAATGATAGCGTAACTTGGTTCAGCATCCCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACCACCGCACAGGTGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 4 2387710-2383368 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAE010000001.1 Psychrobacter lutiphocae isolate Psychrobacter lutiphocae IMMIBL-1110, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 2387709 33 100.0 32 ................................. AGCTTTACGCAACAGAAGAGTATGATGAATAC 2387644 33 100.0 32 ................................. TTGGGTGATACCCGCCCAATTTTTCATAATGA 2387579 33 100.0 32 ................................. CGCTAACAAAGTAGATGATGTAAAAAGAAATA 2387514 33 100.0 33 ................................. ATAAAGTCGTATTGCATACTTACTTTTTAGACT 2387448 33 100.0 32 ................................. TACAAATGCGATGTTGATATTAGTGGTGATAC 2387383 33 100.0 32 ................................. GTTTAATTCCAAAAAACACCACCACCAAAGCT 2387318 33 100.0 32 ................................. CCTAGTATTATATGTAATTTGTGCAACTTAAT 2387253 33 100.0 33 ................................. TTGGACTAGACTGGAATAAGGTTAAAACAAGAA 2387187 33 100.0 32 ................................. CTAAACGCCTAGTAGCTAATCTTTAGTTGCTA 2387122 33 100.0 32 ................................. ATCATCACCTGTAATTGGGTTAGGCAAGCCTT 2387057 33 100.0 34 ................................. ATAGCACTTTACAATCAAACCGTTAATCTGAGTG 2386990 33 100.0 32 ................................. ATAACTCGAAACCATATCATTGAATATAGACT 2386925 33 100.0 33 ................................. CTAGTAATGGCAGGTATGAATGGATAGTGTCTT 2386859 33 100.0 32 ................................. CTTGTCATCTCCCACTCTTTCACAGTACGTTA 2386794 33 100.0 33 ................................. AGAACAGACAGATTGAGCATCCTTTAAGCTGAT 2386728 33 100.0 33 ................................. TGACTAGGCGGGTTTTTAATACCTAGAAACACT 2386662 33 100.0 32 ................................. TCAAAAACAACGTTTAAGAACATGGTGAACTC 2386597 33 100.0 34 ................................. TTTAATTGCTCGGTTAATGTCGCCTCTATCTGTT 2386530 33 100.0 33 ................................. TGATTAAGTCGATAACTCATTGAGCAGTAACTA 2386464 33 100.0 33 ................................. ATGCCAGCCATAGCAAGATATTCCATGCCCTGC 2386398 33 100.0 33 ................................. ACACCAAGAAAGCCCAGCACCATCAACAATGGT 2386332 33 100.0 36 ................................. AGCTGAAAGCCTTAAAGATAAGCAAGCATTAGCAAC 2386263 33 100.0 34 ................................. ATAATGTCAGGACTTTTATCATCAATCGCATTAA 2386196 33 100.0 32 ................................. AGTACCTAGAAGCTTGCTATAGTTTTCAGCAT 2386131 33 100.0 32 ................................. AAAGTGATGTAATGGTTATTCAAGAAGTTGGT 2386066 33 100.0 34 ................................. GCGTTTTATCGTAATGAAGCTAGATATGAATTTA 2385999 33 100.0 33 ................................. AGTCCAAGTCCTGCAGTGCCAGATTCAGACTTT 2385933 33 100.0 33 ................................. CCTAATAAAGATTATAGTCGTGAAATATCAACG 2385867 33 100.0 34 ................................. CCTAACTACAAATACATACCACGCAAAATGATTA 2385800 33 100.0 32 ................................. AATCAGTAATACGAGGTTTATGTGAGTATATT 2385735 33 100.0 33 ................................. TGTCGAATACGTCATTGCCCTGTTTGCCAGTGG 2385669 33 100.0 33 ................................. AAGATAAAGCTGTTACTAAGGATGGTGAATAAT 2385603 33 100.0 34 ................................. TAATGAAGATTTTAAGAAGTGCTTTACTTGCTAT 2385536 33 100.0 32 ................................. TTAACCGAATTACGAGGGGATGAGGCATTTGA 2385471 33 100.0 35 ................................. TATAAGGAAACAACACAATGGGTACTCAAATTCTA 2385403 33 100.0 37 ................................. GATCTTTAGCTTGTCGTAACTGACCCCTTAAATCAGC 2385333 33 100.0 33 ................................. GCTTTTAACTTTATGTAACTGGTTACCCTTAAG 2385267 33 100.0 34 ................................. TTTATGTCGTGCAAAATCCACCACCAGTATTTAA 2385200 33 100.0 33 ................................. TCTTGAAAGAGAGATTGGCGATTATGTACGTGT 2385134 33 100.0 33 ................................. ACTTTGTAGATCGTGTTTGGTGACATAACGCTC 2385068 33 100.0 34 ................................. ACGTATGACAGATAAAGACCCTGAGTTCGTTAGA 2385001 33 100.0 33 ................................. GATAATGAAATGCCGATAGCATCCACACCATCA 2384935 33 100.0 33 ................................. ATCATCTTTTGTAAAATGAAAATTGAAGTCATA 2384869 33 100.0 34 ................................. CGTTAACTGGTACTCCAGCTTATGAAATTATACC 2384802 33 100.0 36 ................................. AAGACGCTAGCGACATAGATCTACAAAAATGCGGTT 2384733 33 100.0 32 ................................. ATCATATCCCTGATAATGACAAAATAGGTTTT 2384668 33 100.0 37 ................................. GATCTTTAGCTTGTCGTAACTGACCCCTTAAATCAGC 2384598 33 100.0 34 ................................. TTTATGTCGTGCAAAATCCACCACCAGTATTTAA 2384531 33 100.0 34 ................................. AGCCCCTTGAGCAACTTCCGCCCCACGTTTAGCC 2384464 33 100.0 32 ................................. TGCCCGTCGTGCCTGATGGTAAAGAGCAAATA 2384399 33 100.0 35 ................................. TATAAGGAAACAACACAATGGGTACTCAAATTCTA 2384331 33 100.0 37 ................................. GATCTTTAGCTTGTCGTAACTGACCCCTTAAATCAGC 2384261 33 100.0 33 ................................. GCTTTTAACTTTATGTAACTGGTTACCCTTAAG 2384195 33 100.0 33 ................................. TCCTTAGTTATTGTTTAGGTTAACATTTACCAT 2384129 33 97.0 33 ............A.................... GCTTTTAACTTTATGTAACTGGTTACCCTTAAG 2384063 33 100.0 34 ................................. TTTATGTCGTGCAAAATCCACCACCAGTATTTAA 2383996 33 100.0 34 ................................. TTTATGTCGTGCAAAATCCACCACCAGTATTTAA 2383929 33 100.0 34 ................................. ACGTATGACAGATAAAGACCCTGAGTTCGTTAGA 2383862 33 100.0 36 ................................. GTGACTTGCCACGCAACGTCTACTTTTCAGCAAAAA 2383793 33 100.0 33 ................................. CAATCAAAGTCTATGTCATCCCACTTCAAGCTT 2383727 33 100.0 32 ................................. CATATCATGCTACTTGTTAAGCCGTCATACTT 2383662 33 100.0 32 ................................. AATGTCATTATTGATACGCTAGTTTTCACTAA 2383597 33 100.0 32 ................................. AAGCCAAAAATGTACAAATCGTACACCTGTCA 2383532 33 100.0 33 ................................. ATCTCGCTCTGCAATGTCTAAAAAATGTCTAAT 2383466 33 100.0 33 ................................. AGTACAGCGATCATTTACGACACCAGGCGAACT 2383400 32 87.9 0 ................A.......-..G.C... | A [2383373] ========== ====== ====== ====== ================================= ===================================== ================== 66 33 99.8 33 TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Left flank : CAGATGCAGGTGGTGCCAAAAGGTTAAGACATATCGCCAAAAACTGTCTTAATTATGGACAACGTGTACAATACTCTGTGTTTGAAATAGAAGTGAACCCTGCCCAATGGACAACTCTTAAAGCAACGCTTGAGAAGATTATCGACCCAAAAACAGACAGTCTGCGCTATTATTACCTTGGCAAAAACTGGCAACGCAGAGTAGAACATATCGGTGCAAAACCTGTGTTAGACTTAAATGATGTGCTGTTGTTTTAAACTTTCCCTAAGTTTTTAGTATACTAGTGGCTGTTATAAGGCCACTGCGAACCTATAGCGTACATAAAATCCCTAGGATATTCGCAATCGATTCGCAAACTATTTAACAACTTGATTTTATTAACTTTATTTTTTAACTTTAACAGTTTGGTAAATAAACTATTTGCCAAATCTGCCTTATAATAGAGACTCGCAAATTTAAGGGATTTTTTTCAACCTTATCTGTAAGTTAATACATAGGCT # Right flank : ATTAAAAGTTTGACAACATCAAGCCACAACAGACACTGCAATTTTAGTTGCACAACAAGATATAGGCTATAAGAAATTTTCTAGAAAACTTGCTGTTTTGACTGGTTACTTGTCCTGTATGGTCAAAGAAATCTAAAATGGTAACCAGCCAATCAAACGCAAGTATTACAAAGGTAGGCTTAGTGAGATTAACGCCGTAAACGTTTAGTATTTCGCTGACGATAAGACTATACTATAATAATAAGGGTTGTTGTGGCCGGTCTCCAACTAGAAAGGAACGTTGGTTAGCTTACCAAGGGTAATCCTGTTCGAATCAGGCAAAGCTGCAACAACCTTTCTACCCTACTGCAACATCAAATACAGCCACATCACCGCCCCATTATTCACAATATGAATGATGATTGGGAGCAATAAAGAGCCTGATTTGGCGCGTGCATAGCTTAGCAATAAAGCCAGTACGAAAATAACGCCCATCTCATACCATTCATATTGTAAATGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCAATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 5 2455988-2456988 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAE010000001.1 Psychrobacter lutiphocae isolate Psychrobacter lutiphocae IMMIBL-1110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 2455988 36 100.0 30 .................................... TTCAATTTTACTTGAAACATCCTTCTTAGG 2456054 36 100.0 31 .................................... TCTGTTGAAGTGTTTACTGTGCGCGTATTAA 2456121 36 100.0 35 .................................... TTTTATGGTATCGAGACCGTGTAACACGGTCACAC 2456192 36 100.0 32 .................................... ATAATAGTAGAGTGCATTTTCCTCTACAACCT 2456260 36 100.0 35 .................................... ATATGTGATGTGCCACCAAACGCACGGTTCAGTAG 2456331 36 100.0 33 .................................... CCATGTTGCTCTCGTCGATGCCGAGTGCTTCCG 2456400 36 100.0 34 .................................... AGTATTTTTCAAAGTAAATAATATCTATAAGCTT 2456470 36 100.0 32 .................................... GTGCCAACCGACGACAGACCCTATGGCAATGG 2456538 36 100.0 35 .................................... ATCGTTGTGAAGTCCTCCAACGTCCAGTGGACATT 2456609 36 100.0 34 .................................... ATTCTAGTTCCGTCAAATACGTAAATATTTGACA 2456679 36 100.0 33 .................................... CATAAGAGTTTAGACGAGCATTATTATATACGT 2456748 36 100.0 30 .................................... AATAACTTGTTCTGGTATTGCGCTTTAATT 2456814 36 100.0 32 .................................... GAAAGATCTACTAAATCACCTTTGTCTAGAGT 2456882 36 100.0 35 .................................... TCAAATATAAGCATAGTTGTTGCATTTATGTTAGG 2456953 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 15 36 100.0 33 GTTCTGCACTATGCAGAGGTACGTACCGATTAAGAC # Left flank : ATAGTCAGTATCGCGCCCTCGATTGAGGTGACAACGTGCATGCCGTTCATTTGCTTCAGCTGTGGTGATTCCTTAGCGTATTGATCAATCTCTTTGCGGCCTACGCTATAGTATATCGCACCTGCTTGATAGCGCTTACGACCATAACGCAAGATAGTGGCAACTTGCTTGGCACTAAAGCCACGCTGCGCAGCACGCACATGGGCATGGTGAGTATAACCAAGTTTGATCGCATTTTGATTCATCATCTGCATTCTCCTTAATCCAAACCATTTAAGCGAGTATGTCGGTGTTGATATTAAGTATGCAGCAAATAGTTAAAACTGGCTGATTTGGCAAGCTTGTTGGGATTGTAGTTCGTTTTGTGAAAAAAAGCGCAAAAAAGTAAAAAAAGCGTTAGTGACCTATGGTATACTCAAGACTTGACAGACTTTCGAAATCCGACATCCCTAATTTTGTCCTCTGGACGCTATATGTGGTGTGGCTTTGAAAATGGCAGG # Right flank : CGATTTTTTCAACTAAACTGCTTTTATTCATAAAAGTTCTGCACTATGCATGAGAACAGAAATAGCAAAGCACTGCTTTGCCTGTTCGCAAGGGGAGAGCTGTGCTCGAGTTGTACGTACCGATTAAGACCTTAATTTGACGCTCAATGTCGTCAACACTAAGCGTTCTGCACTATGCATGAGAACAGAAATAGCAAAGCACTGCTTTGCCTGTTCGCAAGGGGAGAGCTGTGCTCGAGTTGTACGTACAGATTAAGGTATGAACACATTTGCATAGTGTGATGGTTTGTCTGTCATGCAGTACACATCAACTAAAGCGGGGTCTGATTTATCAGGTTCCGCTTTTTATTGGCTAAGACTTGTTCATTTTGAGGTGATAGAGAGTTTAATATTATACCTTTTCTGAAAAATAACCTATCTTTGTCAAACTCGCTAAATCTACTACTTGTAGCATTTGCACTCGTTTTCCTCGATATCTTAATTTTCAGATTTGGTATTAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGCACTATGCAGAGGTACGTACCGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 6 2458939-2459459 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAE010000001.1 Psychrobacter lutiphocae isolate Psychrobacter lutiphocae IMMIBL-1110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 2458939 36 100.0 34 .................................... TTTAGGGTAATTAATTTATTTTTTAGCTTATACT 2459009 36 100.0 31 .................................... TTTTATCGTAATCTTTGTGGTAAGCTAACCT 2459076 36 100.0 31 .................................... TTTTATCGTAATCTTTGTGGTAAGCTAACCT 2459143 36 100.0 36 .................................... CGATTTAAGAACTGACATATCAGTCTCCTTATATAA 2459215 36 97.2 33 ...................G................ CCCTTGAAGGAGAAGACTGCGGGGTTGTGGAAA 2459284 36 100.0 35 .................................... TAAGTAGCCATATCATTGATGGTTAGTATATTCTC 2459355 36 100.0 33 .................................... TAGAGATGTTATGTGCCGAGAGCATTTCTATAA 2459424 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 8 36 99.7 33 GTTCTGCACTATGCAGAGGTACGTACCGATTAAGAC # Left flank : GCCTTGATTGGTTCAGGCGCTCATCACTGGGTCTGCAAGAGCAGGGGCTGGCTGAGAAATACCTAAAAAGAGGCGATTATCTGCGCACTGTTATCTATGCAATGGAGGGTCTGATATCACGCAAGGTTGAACAGGATTATAGTAACTCTAAGCTGCATGACTATGATACACGCCAAGAGGCCTACCAAGAGCTAAGAGATGACACTTCATTTAATTTGTTTAAAGACTTCCGCAATAGTATGGTGCATGGCACTGCCTCAACCAAAAAAAACGTCAAAACAATATTAAAAGATCCCAATAGACTTGAGCAATCGATAAAAGACAGGGTTGTGCATTTATTCAAAAAAAGTTAAATTTAAAGGTATTGATGCCAACATCAAAAAAGTAAAAAAAGCGTTAGTGACCTATGGTATACTCAAGACTTGCCAGACTTTCGAAATCCGACATCCCTAATTTTGTCCTCTGGACGCTATATGTGGTGTGGCTTTGAAAATGGCAGG # Right flank : CGCAAAGTCGTTTCCTTGATAGTTTATATGGGTTCTGCACTATGCATGAGAGCGGATAAAGTGAAACACTGTTTCACCCGCTCGCAAGGGGAGAGCTGTGCTCGAGTTGTACGTACCGATTAAGACGTAGGAGCTTTATGTGTTTTACCAGAATTGAATCGTTCTGCACTATGCATGAGAGCGGATAAAGTGAAACACTGTTTCACCCGCTCGCAAGGGGAGAGCTGTGCTCGAGTTGTACGTACCGACTAAGAGCTAAGGAATGTTTCTTTGGTACTCTCGATAAGTTCAGCGATATGCATAAAACCTATAAGCAATACCAAAACCGGAATCTGATAGAATCAGACTCCGGTTTTTTTGTTTTTGGCAAGCTTGCCGAACTGACGCTGTTAAAAGGAATGCTTTAATATAGTCACCAGAAACAAAAAACTTATCTGCCTAGTGGAGAAATTATTATGGTAACCTATTTAGTAAGCCGTCATATGGGCGCTGTAGAGTGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGCACTATGCAGAGGTACGTACCGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 7 2463752-2464132 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAE010000001.1 Psychrobacter lutiphocae isolate Psychrobacter lutiphocae IMMIBL-1110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 2463752 37 100.0 31 ..................................... ATTAGAGCTAATTTCTGGGCATTAGTGGCTT 2463820 37 100.0 34 ..................................... ATTGCTCAAGGTACGCACGATTGTATTCGGCTAG 2463891 37 100.0 30 ..................................... AAACGCTCTTGTTATTTGCTAATTAAACCT 2463958 37 97.3 34 ....................................A GTAATACAGTTATATTAGTTTTAGTTATTTAAGT 2464029 37 100.0 30 ..................................... AATATTTATTGTTTTTTCAACCTTTCTTAA 2464096 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================== ================== 6 37 99.5 32 GTTCTGCACTATGCAGAGGTACGTACCGATTAAGACT # Left flank : AACCGTTGAACATGAGCCAACAAGGAGGTGAGCGATGTCAAACGTAACCAAACAGCAAGCACCGTTATATGTCTTTGTCTATGATATTAGTAATGATAAAGAGCGCAGCAAGGTAGATGGTGTGCTGCGTGATTATGGCTTTCGGGTGCAAAAGAGCGTCTATGAATGTCATCTAACCCGAGGCGACAAAAAAAGGCTGCTCGATAAGCTAGAGTCTTTGACTATCGAAACGGGGCACATACGCTGCTATGGGGTTAATAGCAAAGTGATAAAGATTGGTGCGCCACCTGAAGATTTAGATGAAGAGTATATTTACTTTATTGAATAGCGGCGTATCTTGTGACCTATTTTGTATAAACTATTTTTTAATCAACAATCAAAAAAGTGAAAAATCCATTGGCGACCTATGATATACTTAACCTCGAACAGCCTTTTGAAATTCGACATCGCTAATTTTGTCCTCTGGACGCTATATGTGGTGTGGCTTTGAAAATGGCAGG # Right flank : TTTTGAAATAGACAATGTCTATTGTCTTTTCGTTCTGCACTATGCATGAGAACAGAAATAGCAAAGCACTGCTTTGCCTGTTCGCAAGGGGAGAGCTGTGCTCGAGTTGTACGTACCGATTAAGACAGACGGTATGCACAGATACCATCTTCTTCCCGTTCTGCACTATGCATGAGAACAGAAATAGCAAAGCACTGCTTTGCCTGTTCGCAAGGGGAGAGCTGTGCTCGAGTTGTACGTACCGATTAAGACACTAGTGTAAGCTCTTGTCCACGCTTTTCAGCGTTCTGCACTATGCATGAGAACAGAAATAGCAAAGCACTGCTTTGCCTGTTCGCAAGGGGAGAGCTGTGCTCGAGTTGTACGTACCGATTAAGACTTTATTATTAATCTGAATAACATAATTTTCACTTGTGTTCTGCACTATGCATGAGAACAGAAATAGCAAAGCACTGCTTTGCCTGTTCGCAAGGGGAGAGCTGTGCTCGAGTTAGATGTAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGCACTATGCAGAGGTACGTACCGATTAAGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //