Array 1 1010042-1018482 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP011528.1 Methanococcus maripaludis OS7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1010042 37 100.0 38 ..................................... ATAAAATGTGTCGAGGAAAACGTATGATTTCTTTTAAG 1010117 37 100.0 34 ..................................... TTTCAGTTGATAATTCTTTCTCACCATATTTGTT 1010188 37 100.0 35 ..................................... GAGTGTGTGGCTCTGAATGTGTCGGGGATTAACTC 1010260 37 100.0 36 ..................................... TTTAACACCCCGTCATTAATAAATACACCTGATGAT 1010333 37 100.0 35 ..................................... ATTTTTTAAGCCCCCCCCAAAGAGTGAGAATATGA 1010405 37 100.0 35 ..................................... AAAGCATGGGTTGAAATGAACACAACAGAAAAAAG 1010477 37 100.0 36 ..................................... TCCCTTATGGTTTCAATTTCTTTTTTAAATTCTGCT 1010550 37 100.0 38 ..................................... GTCCATGTTAATCCGTAGTCAGTAGACCGGTAGATATC 1010625 37 100.0 36 ..................................... GATAGTTGTCTGTCGTATCTTGGATTTTCAGTTCAA 1010698 37 100.0 38 ..................................... TTAATGCCAAGCAGTTTAAAGGCTTTAAGCTCTGAACT 1010773 37 100.0 34 ..................................... ATACCTCGACTTCTACGACTCCGAGCCATCCCAT 1010844 37 100.0 36 ..................................... TAATAAGTTTTTTGAATTGTTAAAAGACGTGTACCA 1010917 37 100.0 36 ..................................... ATGGATCAATGGAACAAATGAGGTGACCAACTTGTG 1010990 37 100.0 38 ..................................... CCCATCATTCCAGGGCCCTTACCAGTTGCACCTGTGGG 1011065 37 100.0 35 ..................................... AAATTAGATGTTAAAGATATAAAAGCTGTTCAATT 1011137 37 100.0 38 ..................................... TGTGTAATCTCCCCATAGTTCTTCCCCTAAACTTCCTT 1011212 37 100.0 39 ..................................... TATTTCCTGCGAGGTCAAAAGTATAATCGAACCCGTTTG 1011288 37 100.0 37 ..................................... TCAGAAGCGGATAAATTAGTAAATAAAGTATTAAGAC 1011362 37 100.0 36 ..................................... CTCTTAAAAACTTCTCTTTATACCATTCTATAAACT 1011435 37 100.0 38 ..................................... ATCAAAGCAGTAAATAGTGAAAAAGAAGTATATGTGGA 1011510 37 100.0 38 ..................................... CTATTCTTTGAGTATAATTTATACACCCCTGCTTTCTA 1011585 37 100.0 38 ..................................... TGTATGCTTCGCTATCTCCAGAAATACGGCCTTGAATT 1011660 37 100.0 40 ..................................... GCCTTTTCGATTTTCAGTTTCTCGTTCATCTGAATGTATG 1011737 37 100.0 40 ..................................... TTTTTGATGGTTCGGTTTCAGTTGGATAGTATCGTTTAAT 1011814 37 100.0 35 ..................................... CAATTACCGACTCTGTAAGCGTTGCAATCTCTTTC 1011886 37 100.0 37 ..................................... GAAGTAATGAAACGAAAAGGTGAAATTATGAATGCAA 1011960 37 100.0 35 ..................................... GCATTTTAATGGGGATATACTGTCCCCCTACAAAA 1012032 37 100.0 37 ..................................... AATCCTCCGGCTTCATACTCATAAAATATTCATAAAT 1012106 37 100.0 37 ..................................... GTATTACAGGTAATCACATAATACCAGATAGTATCAT 1012180 37 100.0 37 ..................................... AATTTGATGTAAATGATGCAAATTCGGATATAAAAGA 1012254 37 100.0 36 ..................................... ATGATAAGGGGGAATTTGTTGGTTCAAAACCAATTG 1012327 37 100.0 37 ..................................... ATAATTTTGAAGCGGTAGATCTTGAAGATTTTTTTGA 1012401 37 100.0 40 ..................................... TTTCCTTTATGTGGAAAATCGTTGTACTTTGTATCAACTT 1012478 37 100.0 38 ..................................... TTTGTCAAGAGGTGAAAAATTGACGGAAAATAATGATT 1012553 37 100.0 37 ..................................... AAAATAAACGTTAATTCATTAAGGATTATAAAACATT 1012627 37 100.0 33 ..................................... ATAGTTTCTGGCAACGCTATATTACTATTTAGA 1012697 37 100.0 35 ..................................... CATTATTAAACTCAAGTTGTGCTTTTGTATCATTA 1012769 37 100.0 36 ..................................... TTAGTGCGATTAGTGCACTCTTAGCAATTGCAAATT 1012842 37 100.0 36 ..................................... TGTGTTTTGAATTGTTCCAGTATTGCTTCCCTTACA 1012915 37 100.0 38 ..................................... CCATTGTACTCAATACGGTTGGTGGCGAATTAGCACCT 1012990 37 100.0 35 ..................................... CTTCGGTTTTTAAATCGTCGATTTTGTTACCTTGG 1013062 37 100.0 36 ..................................... TTTCAACGCTAATTTTCATGATATCAACCTAATTAG 1013135 37 100.0 36 ..................................... GAATCTCCAAACATTGGAGTAAACCGTGCTGCAATG 1013208 37 100.0 37 ..................................... AAACTACACAAAATGCAATAATCTGGACTATTTTGAA 1013282 37 100.0 37 ..................................... CTAATAACGATTTCATAGTTTCACCTTTAATTTAATA 1013356 37 100.0 35 ..................................... GAGTTTGGATGTTGTATCCGTGGTCTAGCAAGTGT 1013428 37 100.0 36 ..................................... AAATCTAAAACATTGCATCCAACAAAGTCTCCAAGT 1013501 37 100.0 38 ..................................... TCAATGACCTTTCCATTTTTTCTTCACCAATCTAAAAT 1013576 37 100.0 35 ..................................... AAACCAGATATCTCGAAGTTCACTGATTCGCAATT 1013648 37 100.0 35 ..................................... TCGCCTTGTCCAATTGATGCATCAAGTTCGTCATG 1013720 37 100.0 36 ..................................... TTTTCACAAATTCGTTATATGCTGCAACTTTTCCTT 1013793 37 100.0 37 ..................................... TAAAAAAGAAATGATAAGACATAAAATAAAAATACAC 1013867 37 100.0 35 ..................................... TTAATGCATATGACACAGAGTTAGAATTAAATGGC 1013939 37 100.0 34 ..................................... GCATACACTGATGGCTTAACGTCACCAAATTCTT 1014010 37 100.0 36 ..................................... CTTCTAATATATACTATGGTTATACTTCTATATATA 1014083 37 100.0 36 ..................................... TATAGTATAATAAACATGTTAATTATTAGAAATAAA 1014156 37 100.0 40 ..................................... TATAATATAGTAGTCGAGGGCTACCCTGCCAGGCTTCTCT 1014233 37 100.0 36 ..................................... GAAGTGCAATGAATAGGAGGGGGAATGAAGAAGCGG 1014306 37 100.0 36 ..................................... CGATCAACTTTGGGTCTACCCCCAACACGACCTCGA 1014379 37 100.0 35 ..................................... GATACAATTATTCTCAAAAACCGTCAAGGATTAAA 1014451 37 100.0 35 ..................................... CAAACATTCCCAATTTTCGGGCAATTTCAATACAA 1014523 37 100.0 36 ..................................... TTTTCTCACTATATATGGTCAAGAAATAATTTCGGA 1014596 37 100.0 36 ..................................... AACTCACAAATCAGTTCTTCGTCATCTGTGTAGTAT 1014669 37 100.0 36 ..................................... CTCGATTGATGTGTCACAAAATGGCTTATGGTGCTT 1014742 37 100.0 37 ..................................... GCGTGGTTTGATGGCTCAGCTCAACCATATTCTAAAA 1014816 37 100.0 34 ..................................... GATACTATTTTTTGATTATGTAATAATTTTAGTA 1014887 37 100.0 36 ..................................... TCAAATATAGGAATTCCAAAGATAGCTTACGAGATA 1014960 37 100.0 34 ..................................... TAAGATATTGGAAAAAAAAGGATACCTTAAAAAT 1015031 37 100.0 35 ..................................... TTAATTTTGCATGATTAATTGTTACTATTCCTGTT 1015103 37 100.0 35 ..................................... CAAATATGGGAATTCCAAAGATAGCTTATGAGATA 1015175 37 100.0 36 ..................................... ATAACCATTCATGAAACAATGGTTGATAGGATAGAA 1015248 37 100.0 36 ..................................... ATATATCTTTCAACAACTTCTACGCTTCCTCTACCA 1015321 37 100.0 37 ..................................... CATATTGTCATGTAATCTCTAATTATTTCAATAGAGT 1015395 37 100.0 35 ..................................... CTTCTGAATAAACATTCTCATTATCATATAAATAG 1015467 37 100.0 35 ..................................... AATTTTCGTTAATAGTTAAAACAACCCCATAAGGA 1015539 37 100.0 35 ..................................... TCTTCTGTGCTGGTTTGGGGTGTAGTAATGGTATC 1015611 37 100.0 35 ..................................... TTTCGGGATGTTTCATTAATTTTGTAGCTGTAACT 1015683 37 100.0 36 ..................................... CATTGATTGATGAACCTTCAAAAATGAATAAACAAT 1015756 37 100.0 36 ..................................... ACAAAAGCCTTATGGAAGATGTCAAGATGCATATTA 1015829 37 86.5 36 ........A...CT.....A.T............... AAATTCGATACACTTTTCTCATGTTATAAACCAAAC 1015902 37 86.5 34 ........A...CT.....A.T............... ATGGAAAAAAGAGGTAGAGCAGGGTTAGAAGATT 1015973 37 86.5 38 ........A...CT.....A.T............... GGCATTACTTCATCATTCTTATTCCATCCTTTTCTCAA 1016048 37 83.8 35 ........A...CT.A...A.T............... TTCCAACAATGCAATATTCAAGACCGAAAAGCCAA 1016120 37 86.5 38 ........A...CT.....A.T............... TCTGATTTAATCGCTGATTACAAGGGGAATTTATCAGA 1016195 37 86.5 37 ........A...CT.....A.T............... TCTGTTTAGTTTTTCTTTGTTTTTCTGTATTCTATCT 1016269 37 86.5 35 ........A...CT.....A.T............... TTGTGTGCATGGTATAAACTGCACTCCTCCCCATC 1016341 37 86.5 36 ........A...CT.....A.T............... TTAGTGCCCGTTAGAGTCAGTGGTTCTGAAATAATA 1016414 37 86.5 36 ........A...CT.....A.T............... TTAAAAAGAGTTTGTTTTATTAATTCTTTTTAAGTG 1016487 37 86.5 36 ........A...CT.....A.T............... ACTGAGGAAGAAGCTCAAGCAGAATGTGACAGGCGA 1016560 37 86.5 36 ........A...CT.....A.T............... GAACCTACTGCACGTTCAAGATCTTTCAAAGGAAAA 1016633 37 86.5 34 ........A...CT.....A.T............... CAGATAGTTTAAAACTTGGAGTTATTGCCACGTA 1016704 37 86.5 35 ........A...CT.....A.T............... TAATCATATAGTAGTGTCCCCGCTGTAAGGAATTG 1016776 37 86.5 36 ........A...CT.....A.T............... TTTTTGATTTTAAAATTAAAAAAATTGTCTGACTCA 1016849 37 86.5 37 ........A...CT.....A.T............... CAGTTGCCGGCGTTAGTCATGAAACACTTATAAATAG 1016923 37 86.5 38 ........A...CT.....A.T............... AAAAGACTTAATAAACGTATCAAATTAAACAAAGTGGG 1016998 37 86.5 35 ........A...CT.....A.T............... TTGATATTAAAACTTCAGGAAACGCATCCAGACTG 1017070 37 86.5 36 ........A...CT.....A.T............... CCAGACCTATCCCGGACTCCACCTTGTAAATTCAAT 1017143 37 86.5 36 ........A...CT.....A.T............... ATTTATCAGGTATTTTTCTTTTTGACATATTGTCGC 1017216 37 86.5 36 ........A...CT.....A.T............... TCGTCGTACCTTCCGGTTAGTTTGGTTTCGGATAGT 1017289 37 86.5 35 ........A...CT.....A.T............... AGTCAAATTCCCGTCCGCCAATTGCAACAGGAATA 1017361 37 86.5 34 ........A...CT.....A.T............... CTTCCAAAAACATCGAATCCGGCGTTTCCAAATC 1017432 37 86.5 34 ........A...CT.....A.T............... ACGCAATTCTTATATCCTCTGCATTATCTATATT 1017503 37 86.5 40 ........A...CT.....A.T............... TCAGAGAATTAGACCGATTAAAAGATAGTACAATATGCTT 1017580 37 86.5 36 ........A...CT.....A.T............... TAACAAAGGGGGCTTAATCGTTCAAGTTGTATCTGC 1017653 37 86.5 32 ........A...CT.....A.T............... AGGTGATATTATTCACGTCTGTCCTTATTGTT 1017722 37 86.5 36 ........A...CT.....A.T............... ATGAAACGATGATTTTAAAAAAACATTCTTTCTGCT 1017795 37 86.5 36 ........A...CT.....A.T............... TAATAAGTTTTTCGAGATGTTAAAAGATGTATACCA 1017868 37 86.5 35 ........A...CT.....A.T............... GTGTATTTTTGTAAAATTGCTGCCATTCCTGGAGA 1017940 37 86.5 37 ........A...CT.....A.T............... TGATACATTCCGCCTATGTATCAACTATTTTTTTATT 1018014 37 86.5 35 ........A...CT.....A.T............... TGTGGGTATTGATTATATAATTCTAGTTTGAGATT 1018086 37 86.5 36 ........A...CT.....A.T............... TAGAATGATTGTCGGTGTTCGTGTTCGTTTCGCTGT 1018159 37 86.5 34 ........A...CT.....A.T............... TCGTAGTCGGTTATACTGTTAAAATCATCTATAA 1018230 37 86.5 35 ........A...CT.....A.T............... GTAATATGTTGGAAAGTTCCAACATGGATTAAGTT 1018302 37 86.5 35 ........A...CT.....A.T............... AAAGTTACTGAATTAATCTCAGTATGGCCGATAAC 1018374 37 86.5 35 ........A...CT.....A.T............... TTAAAAATCAACCTGAAACACCTTCTTTTAAACCT 1018446 37 86.5 0 ........A...CT.....A.T............... | ========== ====== ====== ====== ===================================== ======================================== ================== 116 37 95.7 36 CTAAAAGAGTAAAATGCAATAGAACAAGCATTGAAAC # Left flank : AGAAATAAATATGACTGAAAAAGATGTCAATAAATTAAGTGAATATTTGGAAGAATTCAGGAAAATATTAACTGGATATTATCCAAAACCAACATCATATAAACAAAGATGTATTGATTGTTGTTATAGAAACATCTGCGTAAAATAATTGTTTCTTGAAAATTATCCTGCGTTTTCCAAACGTATTTCATTTATTTGAAAAATCAAAATAAGATTTAAAACAATATATTTTAAAAATACCTGCAAATTTTAAATATTTTTAACCATGGGAAATAAAAATAACTGTAATGCATACCATATCATAAAATAATATATGAATTTTAGTTTAACCATTATTCCGTGCCATATAATTTTTAAAAAGCAAGAATATACCATAAATAATCCATTGAACTAATTTAACCGGGTATTTATTTTTTGTTGATAAAATGAATAAGAAAAGTAAATATAATGGCAGAATCATAAAAATACTTCGTTATTCTAGAGTTTTTATCACGTCATCT # Right flank : CCGAAGCAAGAGCAAGTTTAATTTCTAAAACTCTTTTATCTTCTTCGATAGTTCATGTTTTAAAAAAACAGGGCAGAGATAACGATTATAAAATATGCAGACAGATTAACAAAGATGTTGGGCAAAAAATAAGAGAATCTACTAATCAATACTGCATAGTAGTTATTAAACAGAGAATTCTACTTGAATTTTTTAATGATCTGCAAGTTTTATATAATCTGATGATATATGGTATATCATACTGATATAATCTATATCACGGTGATACATATGGTTCATGTTCAAGTTGATTTAAGCGATGATTCAAACAGGATTATTGAGATATTCAAGGCTCAACATTCAATTCCTAAAAAATCTATCGCAATAGATATGTTTATTTCACAATTTGCGAGTTATGGTAAAGAAGCTTTAGAATACAACCCTGCATTTGTAAAAGAAACAATAGAACACAGTAAAGGTAAGGAGTTTATAGATATAACGGATAAAAAATCCAGAAGAAA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAAAAGAGTAAAATGCAATAGAACAAGCATTGAAAC # Alternate repeat : CTAAAAGAATAACTTGCAAAATAACAAGCATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //