Array 1 51203-50924 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ957279.1 Prevotella corporis strain MJR7716 Scaffold427, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================= ============================ ================== 51202 49 95.9 28 ...............................................GC GAGACAGAAGTATTCCCTTTGAGGACGT 51125 49 100.0 27 ................................................. ATGTTAATTATGAAGGTGGAGGAGAAG 51049 49 100.0 28 ................................................. CGCAGCTGGTATTCGTCCGCCACTTCCT 50972 49 98.0 0 ...............................................T. | ========== ====== ====== ====== ================================================= ============================ ================== 4 49 98.5 28 GTTGTGATTTGCTTGAAAATTCGTACCTTTGCGGTAGCAACAACAACCA # Left flank : GAATTGTGACAAGCTAAATCCGTATAAGACACTCATAGCCTGACGATCGAAACATTGTTCCAAACAACAACGATAGAGAGCATTTTTCACATTATTAACT # Right flank : CCTTGAGTGCATAGCTTTCAAGGGTGGTGTTGTGATTTGCTTGAAAATTCGTACCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATTCGTACCTTTGCGGTAGCAACAACAACAGAAATCGCACAAAGTGTTGGTAATAAGTACAATACAAAGTTGTAGAAGAAAAATAAAATGATGCCGCAAAACAAAATCCCATCCATACTGGATGGGATTTTTGTTTTCTATAGACAGGTAAATCAGAAGAGTTCCAACTGTTGATATGGTGCATTCGGTGGTTTGGGCTTTTCACCATAAAACAGCTGAATGTTGGCAAACTGTTTGTCGGTTATACACAAAATACCGACTTTTCCAAGTTTGGGAAGGTTGTTACGAATACGCTTCATATGAACTTCCGCATTTTCCATACTCGCACAATGTCGTACAT # Questionable array : NO Score: 4.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:-0.5, 7:-0.04, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTGAAAATTCGTACCTTTGCGGTAGCAACAACAACCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.57%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTGAAAATATGTACCTTTGTGGTAGCAACAACAACTT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.90,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //