Array 1 197562-200407 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJLR010000001.1 Mediterraneibacter glycyrrhizinilyticus strain An427 An427_contig-110_0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 197562 30 100.0 36 .............................. ATGAATTTCCTGTGCTCGTCCAGATACGCCACATGT 197628 30 100.0 36 .............................. TCGAAAAGTTTTTGTACATTTTCTGAACTAAGTTTC 197694 30 100.0 36 .............................. TGCTGTGGCGTCCTGGCAAAGAATGAAACCTGATAC 197760 30 100.0 35 .............................. ATAAGTTTTAACATTGTTTTTGACACGTCCTGTCC 197825 30 100.0 37 .............................. TTGAGCGAAAGGAAGAAATCATCCGAAAAGTTTTCAA 197892 30 100.0 35 .............................. TTTACAATTCCGCTAGAACCGCCGCCCTCATATCC 197957 30 100.0 35 .............................. TTCCAGATTGCAATATTCCTTATGGCATTGCAAAG 198022 30 100.0 36 .............................. AGCGGAAAGATACGGAGAATCGGAATTCAGAACATC 198088 30 100.0 36 .............................. TTATCCATTATAGTTCCACTCCTAAAGTCCGGCCTG 198154 30 100.0 34 .............................. CTGAGATTACTCTCTATATAGCCTTTTTGATTTA 198218 30 100.0 36 .............................. TTTTCTCTATCGGTCGGAAAGGTGAGTATTCCAAGA 198284 30 100.0 37 .............................. TTACCAGTAAGGATTTCAATATATTTTCCATGCATAC 198351 30 100.0 35 .............................. ATCATTGAGGAAACCGTGAATTGTGACAGGGCAAC 198416 30 100.0 35 .............................. ATGTGCTTGACCCTCATGGTGTTGATCTGCAGGCG 198481 30 100.0 34 .............................. GCAGAACGGGTTCGTGCTGACATTGCAGGAGATC 198545 30 100.0 35 .............................. ACAGTATCCTAAGAAAGATCATGAGCCTATGGACT 198610 30 100.0 36 .............................. ACCTGCATTTTCGGGACGGAAATATCCGGTACGACC 198676 30 100.0 36 .............................. GCAGGTCCGGGATGCAGCGGCCGAGGTATGCCTCCG 198742 30 100.0 36 .............................. ATAATTCTCTGCGTGACCTGTTTGAGATAGGATTCA 198808 30 100.0 34 .............................. AAGTCCAGGGGTTTCCCGTCTTTCCTCCGGAAAT 198872 30 100.0 35 .............................. TCTGCAGTGATCTCTGTGTCAATTACCAGGTCCGT 198937 30 100.0 34 .............................. TTTTTTCCTCAATAGCTTCTGCCTGTATCTGCAA 199001 30 100.0 34 .............................. GATATTTGCTCGCCCCCGGCACGATGCCGTTGTG 199065 30 100.0 34 .............................. TCAATCTTGTCGTTGAGCTCGTCCATCTCAAGTT 199129 30 100.0 36 .............................. TTACATCCGTCGGCTTTGATAACCTGGACAGCGCTC 199195 30 100.0 37 .............................. TAAATGGCGTAAAAGCGCAAATGAAAGCGCAGACCAG 199262 30 100.0 36 .............................. GAAACGATGAGAGCAAGGACTTCCCCGAAGAGTATC 199328 30 100.0 36 .............................. AACGGTACCGACAGGGCAGTGGATCGCAACAAGCGA 199394 30 100.0 35 .............................. AACAGGAGACGAGATTCACGTCCACGGGTATTACA 199459 30 100.0 36 .............................. AGCTCGCCGCCGTGATGATTGCTTCCACACTTATGT 199525 30 100.0 36 .............................. CCGCTCCCGTGTGCGTTCTTCCCGTTGGGGGATGGT 199591 30 100.0 36 .............................. TGTGAGCATACAGATGATTCAATACTTTTCTTTGCC 199657 30 100.0 37 .............................. TTTCCATCTGGCGCTGCTTCTGTGTAGATTCATAGGC 199724 30 100.0 35 .............................. TATGCATGGACAGCACCGCTGGAATTCGACCTGAT 199789 30 100.0 36 .............................. TGTCATTTCTTAACAGCCCCGCTGTCCCGTTCTCGA 199855 30 100.0 35 .............................. ATATTATTTCCAACCAGTCCGGATGCAAGTGCCTG 199920 30 100.0 34 .............................. TCGCACAGGAAAAGTACATCGCAGTCACGGAAGA 199984 30 100.0 37 .............................. AGTGCTGACGGACGAAGGGATCACGGTTCAGCAGGGA 200051 30 100.0 36 .............................. TCCAGAACAATGAAGGTGTTAAGCAGTCTCTTGAAC 200117 30 100.0 36 .............................. TGCGCTCCGGTCGGGGCCTCCCACGGGAGGGCATAT 200183 30 100.0 36 .............................. CTCCCTATCCCGTATTTTCTCGCCAGGTACTCCACC 200249 30 96.7 33 ......................G....... TCATTATCACCGTCCCTTGTATGATATGCAGTG 200312 30 100.0 36 .............................. TGTCGGTGGAATCAGAATCGGAAGAGAAACCGAAAA 200378 30 96.7 0 ..........................C... | ========== ====== ====== ====== ============================== ===================================== ================== 44 30 99.8 36 GATAAAGAGTAACATGAGATGTATTTGAAT # Left flank : GTTTTCGATATACCAGTGTCCGAGGAGATGACTAAATGGCGAAAAAAATAAATTATAACTATGCATTTGTGTTTTATGATGTGGGAGAAAAAAGAGTACAAAAAGTATTTAAAGTGTGTAAAAAGTATCTTTCTCATTTCCAGAAATCGGTTTTTCGGGGAGAGATGACGCCATCAAAACTGATACAGCTGAAGAATGATCTGAAAAAGGTCATAGATAAAGAGGAGGATTTTGTCTGCATAATAAAACTGATGAATGACAATGTGTTTGGAGAAGAGATTTTGGGAAATGGTGATATTGATACAGGGGAGACTTTGATACTCTGATTTTACCAGGTGACGGATTGGAAAAAGAGTGAAAGAGGCCCGAAAATACAAGGAAAATAAAGAAAATAAAAGGGATGCGGTTGAGAGACAAAGATGGCTGGTAAAAAATGATAAAATGTTGAAATATAAGGGGATTTGAGGTATAGTGATGTGGGAAAAGGCGGAAATACGTTG # Right flank : TTCTGGTCAGGAATTTTCTTTATGTTGAATGTTCCAAATAAAAGTATGTTTGATTTAAATGATTTATTATAAAAATTTTTGAATGTGGATGGTTTTACAATAAATATTTAAGTGTTTACTGTTTGTATATGACGATAAATTGAAAGGAGATCCCCATGAAATCCCTCGGAATCGATATCGGAACCACAACGATCAGTGCTGCAGTCATCGACGCAGTTACAGGCGCGGTCATTACCACACGTACCGTATCCAATGACAGTTTTATCGAGACGGCCAGCCTCTGGGAGAAAATACAGGATCCGGGCATGATCTGTAAAAAAGTATTTCGGCTGGCGGACGGATTTCTTGATGAGTATGAAGATATTGGAACGATCGGTCTGACGGGACAGATGCACGGGATCGTGTATGTGGACCGTGCGGGAGAATGTACAGGGCCGCTGTATACCTGGCAGGATGAGCGGGGAGATCAATCGTGTTTTGGCGGAAGGAGTATCTGTGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAAGAGTAACATGAGATGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 625-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJLR010000030.1 Mediterraneibacter glycyrrhizinilyticus strain An427 An427_contig-110_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 624 36 100.0 38 .................................... ACAGAATCTTCCGGCTTCTATGCTTTTCCCGTTCCATA 550 36 100.0 38 .................................... CCTCATCCTCTGCCAACGTAGCCGAGTTCTTTTTCTTT 476 36 100.0 37 .................................... TCTCGTTATGCATATCTAACGGAGTTTCGTCCCATCC 403 36 100.0 37 .................................... TACTTCTCTGCCTCATCCTCTGTAATGTCTACGATGT 330 36 100.0 38 .................................... ACCATCTCCTCCTTCGGGATGCTTAATACATCAAACTC 256 36 100.0 37 .................................... CAAACTATGGTTGATCTGTACAGACTTACCATCTTCT 183 36 100.0 38 .................................... ATCTCTTCAGTTTCATCAGTTCTCTCCCAGTTAAATTC 109 36 100.0 38 .................................... AGACCTGTTTTTAATCCATCTGCTTTCATTTCGTTTTC 35 35 97.2 0 ...................................- | ========== ====== ====== ====== ==================================== ====================================== ================== 9 36 99.7 38 GTAGAAATGGAAGTAGCCCGCCGAGGGCATTGACAC # Left flank : TATTCCAGCACTAACGATGCACGGACAGAACTCCGGGGAATATCAGGAAAGATTGAACTACGAGATGTGCCTGAAGAGTGTGTTGATTATCTGATAGCCGGAGAGATTACTCACATTGGGAAAAACACAAGTTTTGGATTTGGCAAATATTATTTAAGCTCAATGTGCTGAAAGAGAACGAACCGGAAAATCACTGTATTTTAACGGAAAAGTAAATTAATACCAGCGACATTGCAGGAATACTATTTATATGTAATCCTGCAGTACCTGTCTGGTAGAGAAATCCTTAAGAAAAATTAGCAAAAACTCTTTTATCAAATTGGAAGATAAAGTATAATATTTACAGTGTCAGAAGAAGAGTAGAGGACACTTAAATATGAACAAATTGTGAACATGCCAAAAAATAAGGGAAAAACACTTAATTTCAGAATATTCAGACAAATACCTGCAAAAATGGGGCTGGAAATCCAGTGTTTATGCGGGGGGGGTCAGAGAGTACT # Right flank : A # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATGGAAGTAGCCCGCCGAGGGCATTGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.90,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 78715-77068 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJLR010000010.1 Mediterraneibacter glycyrrhizinilyticus strain An427 An427_contig-110_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 78714 36 100.0 38 .................................... ACCACAAGCTGCTCAACTGTCTGGCATTCCTGAATCTC 78640 36 100.0 37 .................................... CAGATTTTTTCCACTAAAGCTAAAATTTTATTCTTCA 78567 36 100.0 37 .................................... AGTTTCTCTCATAAGTGCATTGTCCAACACTCTTTCC 78494 36 100.0 40 .................................... ATCAGTTATTCAATTCATTATTTGTAACTCTCTGTTCATA 78418 36 100.0 36 .................................... CAGATTCTGCTTATTATCAGGATTGATATCTCCATT 78346 36 100.0 37 .................................... AAATTGTGTTCTTTGAAGAATGACTGATAGAGATAGA 78273 36 100.0 37 .................................... ACATGGCGGGCTCGGATTTGTAGGCGTTATGTGCATG 78200 36 100.0 37 .................................... AGGTTCTTACCCATGTATATTCCTCCATTTCTTTCGC 78127 36 100.0 37 .................................... ATACGGCAATAAAGGCCAAAACGGTCGTTGCTGCTGC 78054 36 100.0 37 .................................... ACTTTGTTTACCTTACCACTACCTGTTGTCCGTGACA 77981 36 100.0 37 .................................... ATTATATTCATTTTGTCTTTTTGTCCTTCTGTGTTAG 77908 36 100.0 37 .................................... ATACAGTTATAGCCTCCTTTTCTAAAATTGTATTTAC 77835 36 100.0 36 .................................... GTGTCTTCCTCAACTAGTATCAGTGATTTTTCAAAG 77763 36 100.0 37 .................................... GATATTTTCTGACTTCTTTTCTGTTATAATGCGTAAA 77690 36 100.0 35 .................................... TTATGTCTACGGCACACATTAATTACTGCAATGAG 77619 36 100.0 35 .................................... TACCGACAAATATGTTTTACTTTTTTTAGTATATC 77548 36 100.0 38 .................................... CAAATGTTTCATAAACGGCATCAATATCTTTGCTAAAC 77474 36 100.0 38 .................................... AGCATTGGTTGCCACCTGAGCTGCATCAACAGACTCCT 77400 36 100.0 36 .................................... AATATTCTGATTGTCTGCCATGAGCTGCTCTACCGT 77328 36 100.0 38 .................................... CCTATTTGATCATATTTGTGTCCTAATGCTTTTATGGC 77254 36 100.0 41 .................................... ACCTTCAATCATCGATTCACCGATATCTTCCACGTCGTTGT 77177 36 100.0 38 .................................... CATTTTGATTTCCTCCGCTGAAATACTGTTTTTATTGG 77103 36 91.7 0 ...............................A.A.T | ========== ====== ====== ====== ==================================== ========================================= ================== 23 36 99.6 37 GTAGAAATGAAAGAAGCCCGCTTAGGGCGTTGACAC # Left flank : TAGTATACTTTGAATAAGCAGAAGACTGCAGAAGGCAAGGCTGAGATCCCGGCGGGAGAATAGACTCCTGCCGGGAAAAGATTAATGGCTGAATTTTGCCACATGTGAATTCATCGCTCTGATGCACTCAAGCTCTGTACTTTGTTGTTTATGTGCACATCGGTTACGAGTTTCACCTGTGTTCAAAAGCGAAATGAACTATCACAAATCCTCGAAAAATCTTTGTAAAACGCTTTTATCAACATTACGATTGATGTATAATAATCGTGGATGCAATGTAAGATGATATGATAAAAAAATAATCTTTTGTGATGTTCCCACGTCTGTTTTTGAGGCGTGAATCAGGTTATATGAGAGCGGATGAATACATGGGAAAATATGAACAAAGTGTGAACATGCCAAAAAATTTCTAAAAAGCGGTTAATGTCAGAATATTCAGACAAATACCTGCAAAAATGTGTCTGGAAAGCCAGTGTTTATGCGGGTTCCCAGAGGGTACT # Right flank : TTAATAGTAACATCAGACCACCAAGATAATGGATTTACTCGTATAATTTACAATGTTGCGTTGATATGTTAACTGCGGTCACGATATTTTTTGTTTATAGCAGTGATGGATAAAATCTTGTCAAAATGATGAGGTATATAAACCTTATGTCTTTGACAGGATTAGTATCCTGTGTGACTTTTTTGGCGGTATGGATTGGACGTCGGTTGTATATCAGAATATGATGAAGTGGTAATGAGAAAAGAATACGTTAGCTGAGTAGCGCAAAAATTGTCAGGAGGAGAGCCATATGATCTATGCAGTAAGTGATATACACGGATGTTACAGGCAGTACAAAGAAGTTCTGGAGAAGATTGCGTTTTCTGATGAAGATACTCTGTACGTGCTGGGAGATGTGCTTGATAGAGGTCCGGAACCGCTGCGCGTGTTGGAAGATATGGCCGGGAGATATAATGTTATTCCAATCATCGGTAATCATGAATATATGGCTTTATCTGTAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATGAAAGAAGCCCGCTTAGGGCGTTGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.10,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA // Array 1 9067-12668 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJLR010000063.1 Mediterraneibacter glycyrrhizinilyticus strain An427 An427_contig-110_62, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================================================================================== ================== 9067 33 100.0 35 ................................. ATAGTATAACCAAGCTAAAGGACAGGCAAACGAAA 9135 33 100.0 34 ................................. TTGTTGGAAAATTTACGGCACCAACAGAACCGGA 9202 33 100.0 34 ................................. GGAAGAAACAATACGTGAATTACATAAATATAGC 9269 33 100.0 37 ................................. GATGCCTACATTGAACGTAGGGATAGGTCGGAAAAAA 9339 33 100.0 34 ................................. GATAGTATAGTGTTGGCTATTGATACTGATATAG 9406 33 100.0 36 ................................. AAGATGAGAGAAAAGGTGAAAGAAACAAATGTGCCC 9475 33 100.0 35 ................................. ATTGATGGTGTGGACGGATGGGATATTGATATAGC 9543 33 100.0 34 ................................. AATCTGTCAATACTAAAATACTATACCTTGTAAT 9610 33 100.0 34 ................................. GTTTTTCTTGATGGTTATATAATACACGGAAATA 9677 33 100.0 34 ................................. AATACGTTAATCTATTACTTACTAAAATTAAATA 9744 33 100.0 33 ................................. GATCATCCCAGTAAATAAACTAGGATTATTATT 9810 33 100.0 36 ................................. GTTGGATGTTCTACTACCATGTTGGCGGGTTCTAAT 9879 33 100.0 36 ................................. ATACCTCTGATATCAGGTACAAAGGAAAGTATTACC 9948 33 100.0 35 ................................. ATGAATGGCAATTTCCCGTTCACATTAGTGATCTT 10016 33 100.0 35 ................................. ATACCAGAGAATGCAGAGTTTTCGGATACAAAGAT 10084 33 100.0 34 ................................. ATGCTGGAAATGATTCTGGGAGAATATCTTTCCG 10151 33 100.0 34 ................................. ACGAATGTTCCCCCTGGCCTATTTGTCGATGGAA 10218 33 100.0 34 ................................. AAAAGTATTGCTGTTAAGGAATAAGCTGGACATT 10285 33 100.0 34 ................................. AAAAACTATGTGCTGGCAGAAAGGGCCGGAACAA 10352 33 100.0 36 ................................. AAGAATGAGTCGGATGCCCTTGAATATCTCCAGTGG 10421 33 100.0 33 ................................. GGTCATGCAAGACATTGCAGAACAACAAGGCGC 10487 33 100.0 34 ................................. GCGTCCTGCGTTCTGCCGGATTCATCTGTGCAGT 10554 33 100.0 34 ................................. CTCAGACTACGATCCACAACACGATTCCAGGGTC 10621 33 100.0 33 ................................. ATGGACGGATTTTGGGATGGACTCGGAGATTAC 10687 33 100.0 33 ................................. TGGGCTGCGTATTCCAAAGCCAGATAAGCCGTG 10753 33 100.0 35 ................................. ATGAAGGAAAAGTGATGATTGACCCGGTGACAGGT 10821 33 100.0 36 ................................. TCTAATATCTTCATGGGAGTTACCGAGTTAGCACTT 10890 33 100.0 34 ................................. AGCATAGGAATAAATGTATGTGCCAAATGGGATT 10957 33 100.0 34 ................................. ATAAAACCAGTATAGCGTTGTGTCCCCTGGCTGA 11024 33 100.0 35 ................................. AGTTGGCGATAAGCGGTAACGATCTCACCTGATAG 11092 33 100.0 37 ................................. AAAAACTCCAGATATGCATACTGGCATCCATGAGCAG 11162 33 100.0 35 ................................. TGGCTCCGTACCCATTCTGGATAAGCCAAAAGACA 11230 33 100.0 34 ................................. ATAATAATCTGCCGATGATCCTGACGATCATCGC 11297 33 100.0 35 ................................. TCAAATACGATACTCGGATCAAAAGATACCAGAGG 11365 33 100.0 35 ................................. AGAATGCAGATCTGGAAAATTGGAGGAGGCAGAAG 11433 33 100.0 34 ................................. ATAAGGAGGATGCAGACATGGAAACACCGATCGA 11500 33 100.0 34 ................................. ATCGTGATACTGGTTGCACTGGTCGTTCTGGTAG 11567 33 100.0 34 ................................. ATTATCACGATATCACAGAAGAATGCAGGGCAGC 11634 33 100.0 33 ................................. TTCGGGGAAATGGCAGCAGGCACGCGGGAAAAG 11700 33 100.0 34 ................................. AATTCCTCGTCAAATGCTGACACGTCTACTGCTC 11767 33 100.0 33 ................................. GACCTTGTACATGTCCACCGAACTGCCGTCAAC 11833 33 100.0 35 ................................. ATAGGACATAAATGCATCTTCCAGAGGTCCTTCCA 11901 33 100.0 34 ................................. GTATCCTTGGTTTTTCGATGCAAATGATATTCCC 11968 33 100.0 34 ................................. GGACTGTATCCCCAGGCAAATACATTTCAACATT 12035 33 100.0 35 ................................. ATCGTTTGTGTTTCTACATAAGTTGATACGTTATA 12103 33 100.0 34 ................................. GACAGCAAAACCGTTACGTTCAAGCGCGCTCTTT 12170 33 100.0 34 ................................. CGTATTCGTCAAAAAACATGTGCTTGACATTGTA 12237 33 100.0 33 ................................. GTTAAGAAAGGCAGAGAATACAGGGATCACGGT 12303 33 100.0 34 ................................. GGGCAAGGAGCACCGCGCGCGGAGCAGACGAATG 12370 33 100.0 101 ................................. TATAGAGATGGCTATTATGTGGGTAAAATCGGAGTCGTTCTTCGGCATGAAGGCCGTAAACTAAAGGTAGACTTTAGCTCCAATTATCCTATGCTGTGTTT 12504 33 78.8 99 T.T..T....GT......A.A............ AAGGTGGGAGGATACGAAGGTGACTTGACGAAGGTGTAGACCTCGGTAGGAGGATTCTGAAATGAAGGAATCGTGTTGCCTTTGTATATCTACAGTAGC 12636 32 78.8 0 .....T...AA...AA....-...........A | A [12654] ========== ====== ====== ====== ================================= ===================================================================================================== ================== 52 33 99.2 37 GTCGACCTCCCCATGGAGGTCGTGAATTGAAAG # Left flank : TGGATGAATATCCACCATTTTTATGGAAGTAGGTGAAAAAATATGCTTGTGCTTATAACATATGACGTAAATACACAGACAGCTTCTGGGCGTAAGCGTTTACGAAAAGTAGCAAAACAATGTGTTAATTATGGACAGCGAGTACAAAATTCAGTCTTTGAGTGTCAGTTGGATTCGACCAAGTATCGACAGGTAAAGGCAATTTTGGAAGGGATTATCGATAAGGAAGCAGATAGTCTGCGATTTTATAATCTGGGGGATAAATATAAAAATAAAGTGGAACATATTGGAAGTAAGCCAAGCTTTGATGTGACAGAGACATTGATTTTGTAGTGCGAATATGGAGCGGACAGAAAATGCTTAGAGATTCGCACCATAAAAGTTGGTATAATCAGAGTTAAAAGTAAAAGGAAAACCAGAGTGAAAGATAAAATGGTAAAAAATAATAATATTGTCTAATAATAATCTTGGATATGAAGAGATTGTTGTTAAAAATTGCT # Right flank : AACTATTAGGCATGTTAACATAGTGTTGCTACAAGTTGATTCGCTTATGATATACTCAATAATAGTCCCTTTCTATATAGTAGTTCCAGTGTTTTTCATATGTAACAAATTCTAAAATGCCACATCTGTGTCTTTCCTCCTCTAAAATCTTCTTTTGCTTTTTCTGTTTGATATAATGTGCTCAGATCAAAAGCGAAGAAACAGAAAAGTCCAGCTAAGAAATGTCAAGAGGTGATATGAAAAAAGGTTAAATTTATTACAACAGAGCAAAAAGGTAACCTTAACAGACCATTTCCAAATATAGGGCTGGTCAGAAACTAAATATTCAGAATACCGTGTTGATTATGCAGCCTTCCTTGTCTTGTCGGGATGCTCCGCAGCAAAGCGCCTGCAGTGTTCTTCCGGAGTGATGATTTCAAAAGGTTTGTTATCCCGGAGCATGGCAAAGATGATGTTACAGACCTTATGCATGACAGCGCCCATTGCTACTGGCTTTTTCT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.20, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCTCCCCATGGAGGTCGTGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 1 474-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJLR010000126.1 Mediterraneibacter glycyrrhizinilyticus strain An427 An427_contig-110_125, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 473 35 97.2 38 -................................... AGACCTGTTTTTAATCCATCTGCTTTCATTTCGTTTTC 400 36 100.0 35 .................................... TCTTTTGTTTATAATAAATCGAATATGCATCCCTG 329 36 100.0 38 .................................... CTGATATAACAGATCATAATCCTGTTCAACCATGATCC 255 36 100.0 39 .................................... ACTTTGATAGTAGCGATAATTTTTTCCATAGTTTTTTTC 180 36 100.0 35 .................................... ACTATTGTGATTAGATAGTATCTCATTATTTTTTA 109 36 100.0 38 .................................... AGACCTGTTTTTAATCCATCTGCTTTCATTTCGTTTTC 35 35 97.2 0 ...................................- | ========== ====== ====== ====== ==================================== ======================================= ================== 7 36 99.2 37 GTAGAAATGGAAGTAGCCCGCCGAGGGCATTGACAC # Left flank : | # Right flank : A # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATGGAAGTAGCCCGCCGAGGGCATTGACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.90,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA //