Array 1 2538-3967 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKC01000311.1 Streptomyces sp. 8K308 NODE_311_length_8313_cov_43.9841, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2538 28 100.0 33 ............................ CATCGGCGACATCACCGCCGTCGATTGGGCGGT 2599 28 100.0 33 ............................ CGCCTTCCAGGCGGCCCGCTCGCTGATCCCCCG 2660 28 100.0 33 ............................ ACGATGGCTGGGTTGTCTAACTTCTGGGATTCC 2721 28 100.0 33 ............................ GTTCGGCATCGGCCTGATGCGCGGCAGCCAGTC 2782 28 100.0 33 ............................ GCCGATGGAGAACAGCGCGACCCCGAGCGTGAT 2843 28 100.0 33 ............................ TCCGGAGTCGGGGCTCGTGGCGTACTGCTGGGC 2904 28 100.0 33 ............................ CGCCCTGGGGTGGATGGCCAACCCGCGAGTTGC 2965 28 100.0 33 ............................ CAGCGCCGTGGACCGCCACACCTCGATGACCGG 3026 28 100.0 33 ............................ GCCTGGCGCGGCATCGCCCAGGGCACCTGGTGG 3087 28 100.0 33 ............................ GCCCACCATCGAGCAGCGAGTGACTGCGCTGGA 3148 28 100.0 33 ............................ GACGCTCCTCATAGGCTTCGGTGGCTGCGGCTG 3209 28 100.0 33 ............................ CGACGTCACCGTGACGCGGGTGGACGGCAGCTC 3270 28 100.0 33 ............................ GATCTGCGGCGCCTGCAACGGCAAGGGGTGAGC 3331 28 100.0 33 ............................ CACCTACGCCGCCCTCAACAGCTTGCCCACCGG 3392 28 100.0 33 ............................ CCCGCACGAGGCGCACTTGGCGCACTGGTCGTG 3453 28 96.4 33 ..............A............. CACGATCGGCCTCGTGGGCTACGGCCAGGACGT 3514 28 100.0 33 ............................ CCCGCACGAGGCGCACTTGGCGCACTGGTCGTG 3575 28 96.4 33 ..............A............. CACGATCGGCCTCGTGGGCTACGGCCAGGACGT 3636 28 100.0 33 ............................ CCCGGCGGAGTCCACCGCAGCCGGGCCGACCGC 3697 28 100.0 33 ............................ CCCTGGGGGTGTGGGGAGCTGCCCGGTCTATGC 3758 28 96.4 33 .................A.......... GACGTTCACGGGGAACACCGCGATGTTGGCGAG 3819 28 96.4 33 .................A.......... ACGGCGGGTGACGGTGTAGAGGTGGTGGGGGGC 3880 28 96.4 31 ....T....................... GCGCGGGCCCGGGGGTGAGTTGGTCGAGGTC G [3906] 3940 28 71.4 0 ....T...G..G.T...A...CC...T. | ========== ====== ====== ====== ============================ ================================= ================== 24 28 98.1 33 GTCGCCCCCGCACCGGCGGGGATCGTCC # Left flank : CGCGCCAGCGACCAAGCGTTCCAGACTCTCCGGTGAGCTACTGCCGAGTCCAGCAGGACTCCGTCCACGTCGAGGAGCACGGCAGAGATTGTCATACCGGGATCTTTCTCACGCGGGGCAGGCACAACACCGAAGATGCCAGAACACAGGAGCGACGCCATTAGTCGTGAACATCCCTGCCCATGGCGACAAGCAATCCAGCACTCCGCAGGGTAGGCCGCACGAGCCCGCCAACCTGCACGAATCGTCCTCCGGCATCCACCGCCGTCTGCGGCGATCCGTGCGCCCGTTGCCACTCAGATAGTCACTCTCCCCGCTCCCCGGTAGACCGCAGGGTGGCAGCGCCGAGGCGACGTAGCATCTCTCCGGAAGCTACGCTCGAAGCCAACATCGTTCGACCGGGCTGGCTCGGCGCCACAGCTAGACCTTGGGGCGCCTGCGCCGACATCCGACTGAATAAAATGAGCCCCTCCGTCTCGCATCACCGCAGGTCAACAAGT # Right flank : CGATGCACGAGACAATCGGCTATTATCGCCCAAGTCGACCCTCATCAGTGCGACTTGTTCCTCCGGCTTGCCTTCAGCCAGTGGGCGCGTGCGATCTCATGGCGAGTCGAGGAAGCGAAAGTCGAGGGCTCGGGCCCCAGCGACGTTCGCATGTGTGAGTCATGCATCCCCACACGGCGCTGATGGCTGGCGTTGAACCTGGGCGACCTCGTGTTTACCGTACCGTTCGAGGCATTACGATGCTTGATCACTACGGGGGTGGGTGAGACGTGGCACGGCCGTCTGACTGGAGTCCGGTGGACATGGACTCCGACCCAACGCCGGGGAGTCCGGGGGAAGTTCGGGAGCTCGCTGACGAGCTTCAGACGTTCGCGGACGACGTGGGCGAGGCGTTGAGTCGTATCCGGGGGATGGCAGAGGACCGGGCCGTTCTCGACTGGGCGGGTTTGTCGGCCGAGGCGTTCCGCAGCGAGTTCGACGGGGTGCCGGGCAACCTGGAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCGCACCGGCGGGGATCGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCTGCGGGGATGGTCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.60,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1749-2203 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKC01000202.1 Streptomyces sp. 8K308 NODE_202_length_12539_cov_49.2381, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1749 28 100.0 33 ............................ TCTTTCGCGAGCGGCTTGCGGACTCGTCCCACT 1810 28 100.0 33 ............................ GCGCCCGGCCCCGCGACGGCGGCCGGCCAAGGA 1871 28 100.0 33 ............................ CTTCGGGTCCAGGCCCGCGCGTTCGATATCGCC 1932 28 96.4 33 .....T...................... GCACCTGCTCCTTGGCGTAACCTTGGCGTGCTT 1993 28 100.0 33 ............................ CATCATCAGGACTCCCAGCGGCCGCACCACGAG 2054 28 100.0 33 ............................ GGCGTCCACACCGTCCGCTACACGCTGACAGCC 2115 28 100.0 33 ............................ ATCGGGCCGCAGCAGGTTGGCCCCGGGGAAGGT 2176 28 71.4 0 ........T....CG.....A..TCC.T | ========== ====== ====== ====== ============================ ================================= ================== 8 28 96.0 33 GTCGCCCCCGCACGCGCGGGGATCGTCC # Left flank : GACATCGCAGAACTCCTGATGCCCGACGCCACCGAGCTCGTCGACCGGGACGTCAACGCGCTCTGGGACGATAGCGGCACCACCGTCAGCGGCGGCACCAACTGGGGCGCCGACATCTTCGACGCGGCCAACTACCTCGCGGTCGTCGGCCCCGACTTCGACGCCCCGATCACGGGCGACGCGAGCGGCTCAGGAGCGGCCCGGTGACCGTCGTCGTCCTCATCGCCGCCCCTGAAGGGCTGCGCGGCCACCTCACACGCTGGATGTCCGAGGTCGCCGCCGGAGTCTTCGTCGGCAACCCCAACTCCCGCATCCGCGACCGCCTCTGGACCACCCTCGCCGACCGCATCGGCGACGGCCAAGCCGTCATGATCGAGCCAGCCAACAACGAACAACGCTGGTCCGTCCGCACCGCCGGCCGCGACCGCTGGTACCCCGTCGACTTTGACGGCCTCATGCTGATCGCCCGCCCACGCTGATAAACCCGCAGCTCAACAAGT # Right flank : TTGCGCTTCGAATGGAGAATTCCGAGTGGATCAGCTTCCGCCACGTTGGCCACCCGGCCCGACTGCCTTATCGCCCTGGCAGGCTCGTCGAGCAGAGCCTGCCCAGCCTTGGTGAGGACCACCGGGCGACGGTTGCGTTCGAAGAGCGCGAAGCCCGATTGACGCGTGAGGACTTGGACTCCTGCTGGCTGAGCGGCTGCCGGGGGCTCACCGCTCAGCCTGTGCAACCCAGCTCAGGAGCTATCCCTGCGGATGCGGGGTTGCCCTTCTGACCTGCGGTGATCTGTTGCGGTGAAGCTTAGTTCACTCAACCATGGTCTGGTTGTCCCGGATGTCCGCGTGGTTGAGGCGCATCCGAAGTCGGGCACGTAGCGCGCGTTGATTGCGCTCTTCAGAGTGGCGGGCGTCTGCTCGTGGTCAGTTTCCTGGGGTCTGTCATCGGGTGCTGGGGTCGTGTGGGACGAGCGCTGGGGTGTTGTCGTCGAGGGCCCAGCCGAGGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCGCACGCGCGGGGATCGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGACCCCGCACCCGCGGGGATGGTCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 963-2819 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKC01000524.1 Streptomyces sp. 8K308 NODE_524_length_3256_cov_30.5615, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 963 28 100.0 33 ............................ GCCGCTGGGGGTGGCGGCGTGAGCAGGGTGACC 1024 28 100.0 33 ............................ CGGCTCCATGTCCGCCTCATACATCGCCTGCCC 1085 28 100.0 33 ............................ CTCCTTGCGCTTCGCCATGCGGACGATCGCCGC 1146 28 100.0 33 ............................ CCGCGAGGAGCGGATGGCGGACATCTACGCCAT 1207 28 100.0 33 ............................ ACAGGTCGAGACCGCTCTCGCCAACGCAGAGGC 1268 28 100.0 33 ............................ CTCGGCGTCATCGAAGTACCCGATCCAGGTCGG 1329 28 100.0 33 ............................ GTCACTGTCACTCTTCCAGGCAAGTCGGGCGTC 1390 28 100.0 33 ............................ GACGAGCGCCGCGCCATGAAGCGCCGCGCGGCC 1451 28 100.0 33 ............................ CAGCCAGGCCACGGCCCAGGTCATGGCCCATCA 1512 28 100.0 33 ............................ TCCGTGAGCAGGCCACCGATACCGCGGCCGACC 1573 28 100.0 33 ............................ CCCGGAGGCGAGCAGCGGCCGGCCGCCGCGCCA 1634 28 100.0 33 ............................ GCCATGGCCGTGTCCCTGCACGCCGAGGTGCTG 1695 28 100.0 33 ............................ TGGCACATGCCGCCCCCTGCACATGGCCCGATT 1756 28 100.0 33 ............................ CGCTGGCGTGCTGGAGGCGTTCCACCGCGGCTC 1817 28 100.0 33 ............................ TCGGGTGCCGACGGCGACGCCGGACACCTCGTC 1878 28 100.0 33 ............................ GATGACGCCGGAGACGATCGAGCGGCTCGGCGG 1939 28 100.0 33 ............................ CTCTCGATGCGTTAGGCCCTGGCGGCACGGTGT 2000 28 100.0 33 ............................ TGCGCTCTCCGAGCCTAGTCAACGCGGTGCACC 2061 28 100.0 33 ............................ CGCCGCCCGCAGATCGGGGTGGGGCAGGGCGTG 2122 28 100.0 33 ............................ CGTCGCGGGCGATGGCCCCGATTGTGGTCTGCG 2183 28 100.0 33 ............................ TCCGTCTGTGGTGAACGACGCTTTCGCCACGGG 2244 28 100.0 33 ............................ CCGGCGGGAGGTGCGGGCCCGGGGATCTTCGCG 2305 28 100.0 33 ............................ CATCACGGGGATGATCGCGTGGACGGCGGCCCC 2366 28 100.0 33 ............................ CTGACGATCACCCTGGTAGTGGCCCAGAAGGGC 2427 28 100.0 33 ............................ TTCGTCCTCGAACCGGGCCAGGAGCTTCGCGAG 2488 28 100.0 33 ............................ CGCCGCCGGGCCACACTGAGCCTCCCCGAAGGG 2549 28 100.0 33 ............................ GGACATCTGGACGGGCGTTTGTGACCGCCCGGC 2610 28 100.0 33 ............................ CTGCGAGCGCGCGACGCTCACCATCAGCACCAC 2671 28 100.0 33 ............................ CAGCCCCACCAGCGGGCGGGTCTCCAGCTGAAG 2732 28 89.3 33 ..A.C........C.............. GATCGACCTCGGCGACGAAGTCCTGGTGGTCGG 2793 27 82.1 0 ....C........T...-.T..G..... | ========== ====== ====== ====== ============================ ================================= ================== 31 28 99.1 33 GTCGTCCCCGCACAGGCGGGGATCGTCC # Left flank : TGTCAGGCCCACCGCCCGAACACGCCGCTCCCCCTCCTCATCGCCCGCCTGGAACGCCGGCGTCGCCTTCCCCACGTCATGGACCCCACACAGCCACATGAACAGCCGCCGACCGTCACCCCCAGAGATCCGGTCCAACATCTCCCGGACACTCGGAGCCAGATACCCCAACCACATCTGCTCCGCGACCGCCGCCGTGTCGAGCATGTGACTCAACAGCAGATTGACCCGCCCCCCGCCATACTTGGCCGACTTCCCCCACAACGCACCGACATGGAGAATCGCCCGCTCCGGTAAGCCAGCCCGCCGCGCGACATCAACCGCCGAAGCGTCCTCCCCAGGGCCCACCATCGCGGGTCTCTCAGCCTCTACGCTCATACCGGCGACCCTGGCACGCGCCACTGACAACGCCACCAGCGCGTGGCAGAGAATGGGGCCAAGACCGAATCCGACTGAATGAAAAAGCCACCCCCGCCACACAAAAGCCCAGCTCAGCAAGT # Right flank : TGCCAGGCCGCGTCACCACCCGGAAATATCCGCAAGCGAGAGGTTCTACTCAATCGAGCAGTTACTTCCGGCCTCCTATCGTCCGCTATAACGGATAGACCGCAACCACCTCGAGTCCTTTGACGCCGGCTTCGCCCGCCCTCCGAAGCGCTGCCAACACTGCGCACTTTGGCGGTCATATCCCGGATAGGACGGAAGGCATCTGCGACTCTGACACCATATCCACGTCATCAAAAAATCGGCGCAGGCAGCACGCCCCGCCGATAGCGCCGAGCATTCCGGATTCGGGGGCGACGGAAACGGTGGGCGGCCTAGTGTCGCGTGATTCTGTTGTGATTACTTCGAGTTGTTGGCGACGAGTTTCTTGACGTTGCGTTGGGCGAGGCGGACTTTGGCCAGGATCTCCTTGGTGGTGGCTGTCCAGGTGAAGGGTTTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACAGGCGGGGATCGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCACACGCGGGGATGGTCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.60,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 10700-11034 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMKC01000109.1 Streptomyces sp. 8K308 NODE_109_length_19236_cov_52.3679, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10700 29 100.0 32 ............................. AGGTCCGCCGCTCGCGCCCCCGACCCTGGACC 10761 29 100.0 32 ............................. TCCCCAGGGGGGCGCGCGTAGAGCGCCAGAGG 10822 29 96.6 32 ..............T.............. GGGCCCGGTCCCGGGGCCGGGTGAACGTACGG 10883 29 96.6 32 .................A........... GGGCTTGCCCTGTTTGACGACGTCGACGAGTT 10944 29 93.1 32 ..............T......T....... CACTTGACCACGGGTGCCCATGCGTCATCGTT 11005 29 86.2 0 .C.........G..T....C......... | T [11032] ========== ====== ====== ====== ============================= ================================ ================== 6 29 95.4 32 CTGCTCCCCGCACCCGCGGGGCTGTTCCC # Left flank : GCGATTCGTACAGCGATCATCCATGACCAAGGGGATCACGACTCTGTCGGGCGAGGTGATCGCTGCACTCGTCGCCGATGTAGACCCCTTGCCGCATGAACGGCACCGGGCCAGGCTTACGTCCCTCAAGCATCAGCGAGCCGAACGCTTCCAGCTGCGCCTTGCTGGTGACGGTGCGGGCCGCGCGCAGGGTGACGCCTCACATCCGGCAGATCCACCGCCGTTCAGGCGCGAGCTCCGGACCATATCCGCCGTTACCGCAGGGCTCCCGTCCACCAGAGACGCCTTCGCACCCCCGTCAACCCGTCTTGCCCGTCCCGCTGAGGAATCTGGGTAGATTCGCAGGGGGCCGGGAGCGGGTAGCGCCGCAGAAAACCGGCCGTCCACTGTCGACCACAGAAGCAGGAACACGCCAAATGACGGCCGCACCCCCTTTGCCCGAATGTGAAGAAGTAAGCAAAAGCACGCCTCCCGCCAGATAAAGCCGCAGGTCACGAACT # Right flank : CGGGGTTCGTGCTGTGGGCCCGGACACGATGCCAATGGCGATCCAGGAAGCCACAGCCTGCCGGTATTAGGACGGCAGTTCCAACAAATCGTTGATCAGTGACAGCATGGTTCCTTACGGTGTTGGAACGCCATCACCGGACCTCGGTCCATAGTGGGAGCCTCTTCGGTCCGTCCTGGGCCTCCACCCTCGACCAGCGCCTGGTTCTTGAGGAGCACGGGGTCGTGTTCCACGGCGACGACGGCTCGGTGCTGGACTTTCCTCGCCCGATCCCCCATGAGCCGGTGCTTCCGGTCGAGGGCCCTCGCTGGCAGCTGCTGTGGAGCGGCGAGCCCGGTACGCCTATGACGCTGCGGCAGGGGGAGAGCGGGCGCACGCTGCACTTCGCGCCCGTGGCCGGTCGGTCCGCGGCGGAGTTGCCGCTCACCGCGGTCACCGACCGCAACGGCAACCGCGTTCGGGTGGAGTACGACGAGGACGGCCTGCCCTCCGCTGTCGTC # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //