Array 1 193379-193210 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUXW01000003.1 Butyricicoccus pullicaecorum DSM 23266, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 193378 33 100.0 36 ................................. CTGCGCCCTTGTCCTGACTGTCTGCACCGTCGCCAG 193309 33 100.0 34 ................................. GCAGATAACCGGCAGGATTTGGGTCAAAATCTGC 193242 33 93.9 0 ............................A...A | ========== ====== ====== ====== ================================= ==================================== ================== 3 33 98.0 36 GTCGCTCCCCGCATGGGGAGTGTGGATTGAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC # Right flank : TGAGTATGGTCATCTTCAGTTATATATGACGCGTACTCCATCAAGAAATAAAAGCATAGTTGCAGAATGTGGGGAGAAGTATGGGAAAACAGGTGCAGAACAAATCCAGCGGTGAGGTTTTGCCGAAGAAGGGCGCAAATGCCCGCACACCGTATGAGCATCAGTGTACAGCGATGCATAATCTTGATCTAATCGATCGGGAAAAGAATTACAGCACCCTGATCGTGCTGCCGACCGGTGGCGGCAAGACCTATACAGCTGCGCTTTGGCTGCTCAAAAATGCCATTGATCGAAAGAAAAAGATTTTGTGGATTGCTCACAGGCAGATGTTACTGGATCAGGCTGCGCAGTCTTTCCAGCAATACGCCTATGCGGAGACCATGCCGCATATTTCTTCTTTCCATTATCGGATTATCTCAGGTGCGACCGAACATGATCGAGCAATCGATATTACACCGGAAGATGATCTGCTGATCGTCGGTAAGGATAGCATTGGACGC # Questionable array : NO Score: 8.26 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCATGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.40,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 423310-423157 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUXW01000003.1 Butyricicoccus pullicaecorum DSM 23266, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 423309 29 100.0 33 ............................. GACACCATTGCAACGCTGGAAGCCAACAAGGGC 423247 29 96.6 33 ......T...................... GGGGTGCAGTGACGTGGTAGAGGTCGCTTTATG 423185 29 93.1 0 ..G...........T.............. | ========== ====== ====== ====== ============================= ================================= ================== 3 29 96.6 34 GTAAACCCCACATGCGTGGGGATGAACCG # Left flank : TCCCGGGATGCACTTTTGCGGACAGCGTGATTTGACCCTGTGGTTGGAGTCGATGCAGCAAGGACAGGTCTGGCACTTTGATTTGTTGGCTTCTCCGACCAAAAAAGTAGCGCAGGATGGTCGGAAGAACAGCCAGCGGCGTATTCTTCGTACCTTAGACGAACGTATTGCATGGTTGGCTCGAAAAGGTGTACAAAATGGCTTTGAGCTGCTGAATTGTCAGGAACTGGAGGGTGGTCAGTTAACCGGTCGGCATACGCAGGAACGCGGCGGACGGATGTATTTGGATCAGTACCACTATCAGGGAACACTTCAGATTATCGATATCAGACAATTTCAAAAAGCGATTCAAGAAGGAATCGGTCCGGGAAAGTCTTATGGTTTGGGGATGCTATTACTCAATCCATGATACAAGACTATCTATTGGACTTTAGAATTTTTTCGGAATAAAGCTCGGTGAATCACAGTGAAAATCGATTGAAACTCAACTTGATTCCAGT # Right flank : GAACCGCGCCTGCACTTTACGGACGAGGAACGGTAAACCCTACATACGTGGGGGATTCTAAAGGAGGTGGCTCAGAAAATGAAAAATCTACAGGAATTGCCAAAATTAAAAGATAGCATTAGTTACTTGTATGTAGAGCATGCAATCATTGAACAGAATGATGCAGCGATTATCGCAATACAGAAAAATGGACGGACACCCATTCCAATCGCTGCAATGACATGCCTGCTATTAGCTTCAGAGAACCCATGAAACAATCCGGATAACCTGTGGAAGGGGACAGGACTTTTGCCGAAACCTCGGCAAAACATGCAATCCGTCAGGTTTAAGTCCTGAGAAGTGCAGAAAAAGAAAAAGCACCGATTCAAACGAATCAGTGCTTTTTAATGGGTGCAGGGACAGGACTTGAACCTGCGACCTCCGGGTTATGAGCCCGACGAGCTACCAGCTGCTCTACCCTGCGATATCTGGTTTGTATCACACGCTCTCGTGTGGTGCTC # Questionable array : NO Score: 4.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //