Array 1 2365980-2369736 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL985606.1 Actinomyces sp. oral taxon 448 str. F0400 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2365980 29 100.0 32 ............................. AGATACGACGAAGGCGACAGCGGCGCAGTGGC 2366041 29 96.6 32 ............................G GGTCACGGCATGCGATCTGAACGGCTGGGCAC 2366102 29 100.0 32 ............................. GGGACTGCCACTTATTCCAAGCCGCGCAGGGA 2366163 29 96.6 32 ............................G CCTATCAAGGCGGAACTCCTGTGGCAGATCGA 2366224 29 100.0 32 ............................. TGGGGCGGCGTCGGTGATCGCGGACGTGTCAG 2366285 29 100.0 32 ............................. CCGGAGTCATGGAACTACGAACGCCTGGACGA 2366346 29 100.0 32 ............................. CGAAGTAGTAGGATCCGTTTGCTTTGTCCTTG 2366407 29 96.6 32 ............................G GGGCGGTTGCAGGCTTGGCCGTGTCAGCGTCG 2366468 29 100.0 32 ............................. GTCAGACAAGGACAGGTCCGCGACACCAACCT 2366529 29 100.0 32 ............................. GGCAACCACACGGATCGGACGGACGGTGCAGG 2366590 29 96.6 32 ............................G CTCCGTCGCGTACTCCTCCAACCGAAACACCT 2366651 29 100.0 32 ............................. CGCCCCGACCCGACGGGGCGCAACAGACAGGA 2366712 29 100.0 32 ............................. GCGCACGCGCTGCGTCGCGCGCTGCTCTGACA 2366773 29 100.0 32 ............................. CCAGACAACGCCTCTCGACATGCAGCGCGTGT 2366834 29 100.0 32 ............................. TCTGACAAGGAGCATCGAGAACAATGAGCAGG 2366895 29 100.0 32 ............................. TCGACCCCGAGTCGGTGCGCCTCGTCTGGGCT 2366956 29 100.0 32 ............................. GAGCTGATGATCGACAGCACGAGGATGACTAA 2367017 29 96.6 33 ............................T TGACTCGCACGTGGCTGATCTGGTTGGCGGTAA 2367079 29 96.6 32 ............................G TCACGACGCAGCAGACGGGTCTGTGGGTGATC 2367140 29 96.6 32 ............................T CGGGGTGCGGGGCGCTCTGAGTACGGCCTGTG 2367201 29 96.6 32 ............................G TGACCATGAGGCTCGACAAGAACCTGACCTCG 2367262 29 100.0 32 ............................. CCGCGCGGCATGGCTGCACGCGGCGGCAGCGG 2367323 29 96.6 32 ............................A CGTGGACAAGGCGGGCATGCTGATGCTGCTCA 2367384 29 96.6 32 ............................G TTCAGCGTGTTGTAGGTCCGATCCGCATACGG 2367445 29 100.0 32 ............................. GTGCACGTCGGCTTGTGGTTGTCGAACGGGAA 2367506 29 100.0 32 ............................. AGCCGCGGTGGGGGCCGGCCTAGCGCTGGCCC 2367567 29 100.0 32 ............................. AGGGTCCAGTCGTCGGCGTCGGTTTCCCGCAG 2367628 29 96.6 32 ............................G GTCACCGTCACCGGCACGATGACCCTGCGAGA 2367689 29 96.6 32 ............................G CGATGGCGGACGTGAAGACTTCGTTGGGGTCG 2367750 29 96.6 32 ............................A GGACCCCTCCAATGGCCGTTGAGACCGTCACC 2367811 29 100.0 33 ............................. AGTAATGAAAGGAACCCTCTAATGGACCGCATC 2367873 29 96.6 32 ............................A GCGCCGGCAAAGCTTACGTTGAATGCTCCGCG 2367934 29 100.0 33 ............................. CATTTTGACCAGGTGGACACGCAGCTTCGCCAG 2367996 29 100.0 32 ............................. TGATGACCCCCGCCGGAGTCGTCTCCGAAGCC 2368057 29 100.0 32 ............................. AGGAGCCGGACTACATTCCGATCCCCGACGAC 2368118 29 100.0 32 ............................. CCTACCACACGGGTCACACCACCGCAACCGGG 2368179 29 96.6 32 ............................G CCGGACATGCCGTTCGCTACGGGTGATGAGGT 2368240 29 96.6 33 ............................G CTTGGCGAGCTTGACGGTAGCACGCAGGCCACG 2368302 29 100.0 32 ............................. GTTGCTATTTTCGGTACATCCCGTGGTGGCGG 2368363 29 96.6 32 ............................G AGCACAGGGAGTCGAAGAAGAAGATTGATTTG 2368424 29 100.0 32 ............................. GACCTTAGTTTGACGGATCAGATTAGGACGGC 2368485 29 100.0 32 ............................. TTACCGATATCATCACTGAACGAGTAGGTGTC 2368546 29 96.6 32 ............................T TGGCGCATCTGGCTGATTGGCGGGGCGAGATG 2368607 29 100.0 32 ............................. ACCCGCCGCCACACCGCCATACGTGCCGCCGC 2368668 29 100.0 32 ............................. GGGGAGCGGACTGTGACTGCTTTTGCTTCGGC 2368729 29 100.0 32 ............................. AACACCCTCGCCGCTGCCGCGGGCATCCCGGT 2368790 29 100.0 32 ............................. GACGGGACCACGATCGGAGTCGGCGTGATGGT 2368851 29 96.6 32 ............................G GCAATATCCTCGTCATCCTCCCGTGGGACGGC 2368912 29 96.6 32 ............................G GCCGAGCGCGCGCTCCTGACCGCCTTCGTCGC 2368973 29 100.0 32 ............................. ACCTCACGATCCACCGGTCTGGAACGCACGAC 2369034 29 100.0 32 ............................. TGCGCGAGCAGCTCGAGTCTTCCAACGAGAAG 2369095 29 96.6 32 ............................G GCTTCACCCCACCACCACCCTCACCCCACCCG 2369156 29 96.6 32 ............................G GAGACCGCCCCATGACCCGCACCCTCTACGTA 2369217 29 100.0 32 ............................. GTGCTGTACAACGAAGGCGGCGAAGGTATTCA 2369278 29 96.6 32 ............................T GTCTTCGAGGGTCACGACGGTTCCTTTCAGCT 2369339 29 100.0 32 ............................. CAACAGGCCGACAAGGGACGCAACACAGGACA 2369400 29 96.6 32 ............................G TCGAGGAGCATGTCCTTCGCGGACACGGTCGC 2369461 29 96.6 32 ............................T CGTGACCTTCCCGTCCAGGGAGGACATCTTCG 2369522 29 96.6 32 ............................G GAGCTGTGCGCAGCATGGGACGCAACCTGAAG 2369583 29 100.0 32 ............................. GACATCCTGATCGGGGCGCGCAGATGATCGCC 2369644 29 100.0 32 ............................. CAACAGGTCATCGCTGCGGGTCGAAGCCGCCG 2369705 29 89.7 0 .......................T...AT | CA,C [2369726,2369732] ========== ====== ====== ====== ============================= ================================= ================== 62 29 98.4 32 GTAAACCCCGCGCGAGCGGGGATGATCCC # Left flank : TGCCGTCACCGGTGGATCGAACTACGCCGGAGAGGACGCGGGAGGATGGTAGTGCTGATTCTGTCAGCAGCCCCGGCCTCACTGCGCGGGGCCATGACGCGATGGCTGCTCGAGGTCTCCCCCGGAGTCTTCGTCGGCCACCTCTCGGCTCGCGTCCGCGAGCAACTGTGGGAACTGGTCCGAGCGTACATAGGCGACGGGCGCGCGCTCCTGATCTGGTCGGTGCGCTCCGAGCAGCACTTCACCGTGGCCTCGCTGGGATACGACCGGGAGCCACTGGACGTCGAAGGCTGCCTCGTCATGCGTACCCCCTACCGGCAGATCGAAGGGTCGTCGTCGCAGGCCCTACCCGGCGCCGTTAAACCGGCGAAGGAGTCGTGGTCGATCGCTGCCCGGCGACGACGCTTCCGCAACTCAGCCGAGCGGTCCCTAGGTCACCAGTGAAGGCGAACGCCCCCTGGTAGGGTGGCCCACCGTTGGAATCACGCCGATCGCCAAGT # Right flank : TCACCCCTCAGCCCTCGCCCGACCATCTCAGCCTCCCCACAATCACACCAGTGATTATTCTTCCCGATCAACGCGAACCACACGAGCACCCCTCTCGCCTCATGATCTCTTCTCGTGCGTGCGCAGGCCCTGCCGGGTCCCGGATACCAGCAGAGTCGGCCCGGCCAATAGACGCCGCGGCGACGAACCGACGCGCGCCGTCGACAACCACGTCACCGCTCGGCTCCCGAGCTCAATGCCCCATGTGCTCCATTTCTTCTCGGGCATCATCCGCAGCAAGAAATACGGGCAAGACGGCAGCCTGCGCCTCCGCGGAGCATCGCTCTTCAGGCGATGCTCCGCCCGAGGCCTTCCCGCCCCTCTTCCACAGCACGACGGCGCAGCCCCCTCGGATCCCGAACCTCACGACCACCTACTGCACGCAGTAGCCTGGCTACCGCCCTCGACGCACCACCAACCGCTATCACCCGACCACAGGAGACCCCATGCGCGTACTCGCG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCGCGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //