Array 1 23441-18027 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBKT01000023.1 Thermoanaerobacterium saccharolyticum strain NTOU1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 23440 30 100.0 36 .............................. GACGCTATGGAAGACATAACATTAAATCTCTACATG 23374 30 100.0 38 .............................. TTTTTCTATTTCATCATTAATCATTTATTTAATCGAGA 23306 30 100.0 35 .............................. ATAGAAGATGTCAAGGCAGAGTTGGGAACAGGAGA 23241 30 100.0 36 .............................. CAAGATTTGAATCCGGAAAAGGACTTCCCGAACTGT 23175 30 100.0 37 .............................. TGGGACAAAGTGCAGCTTCTACAGACACGTATGATAC 23108 30 100.0 36 .............................. TTTTTGACTATGCGAGTGATGTTGAAAGCCTAAGAG 23042 30 100.0 36 .............................. TGGGGATAAATTGGTTAATGTTTTTTTGAAGGATGA 22976 30 100.0 37 .............................. CTTTTAGAATACTTTATAGGAAAATTAGCTAAAACAA 22909 30 100.0 36 .............................. CTCTTAATAATTCTGTATTACTATTAAAAGATGTTT 22843 30 100.0 35 .............................. AGAATAGGTATTCTAAAAAGACTTTTTATAGGCAT 22778 30 100.0 37 .............................. ATTTATATAAAAGCTTGTCGACAGCTTTTAAACTAAT 22711 30 100.0 39 .............................. CGAGTTAAAAATACATATATTACATTCAATAAAATAAAC 22642 30 100.0 37 .............................. GCAGGTAGCCTCGCAAAAATATTGCAACCTATAGCAG 22575 30 100.0 37 .............................. TAATGTATAAAACTGTAAATAATGACTCTAATTTTAA 22508 30 100.0 37 .............................. TTAAAATAACGTTACCAGTTAATTTATCATAATATAT 22441 30 100.0 35 .............................. GCACAGGAGTTTATTGAAAAATACTTTGATTTCAA 22376 30 100.0 37 .............................. GGGTCCTCCAATTTTGAAATTATCTCAAACGTCCTCG 22309 30 100.0 36 .............................. ACTAAACTTGCGTATGATATGGCTTCGTTTTACAAT 22243 30 100.0 35 .............................. CAAGAAAAAGAGAGGTGCTCCAGATGGCAGAAAAG 22178 30 100.0 36 .............................. CCGCTTGGAATAGACGAAAGGCAGGTTGCAGGTGGG 22112 30 100.0 36 .............................. TTTGATGATGAATTCGACGCCAGAAAAGTACATGAA 22046 30 100.0 36 .............................. AAAGGATACTTACAAAAGGTTTGAGATCTTATGGTA 21980 30 100.0 36 .............................. AATGTTAGGGATATAAAGCTTAATAAGTTTTTAAAA 21914 30 100.0 37 .............................. AAAACATTTATCAAATTTTTGCCATCATAAACAGAAA 21847 30 100.0 36 .............................. AAGATAAATGATACATTATATTGCTAATAACATGAT 21781 30 100.0 36 .............................. ATATTTACGGGGGCGTTTAGGAATGGCGACTTCTAA 21715 30 100.0 36 .............................. AAACTGATACAATTTGATCTGTCATACCCGAAAAAG 21649 30 100.0 37 .............................. AAACAAAGTTTTGAGAAACATCAACTCTCAAAACCTC 21582 30 100.0 38 .............................. TTAGTTAACACTTCCTTGAGCCGGTAAATCGCCAATAT 21514 30 100.0 37 .............................. TTTCAAGAGTACGCACAACACCAATAATGTTATCCAA 21447 30 100.0 37 .............................. TATTGACCTTCGGCAAATAGTAGTCTGTTGGTGATGC 21380 30 100.0 36 .............................. GAAGAACTGGAAAACTGGCTAAATGATGTGTATAAG 21314 30 100.0 36 .............................. ATTGACCGAACAAGAAAAAAAAACTATAATTAAAAG 21248 30 100.0 37 .............................. TCTCTAAGCTCTGCCATGGATTTACCTGTTTTTTGTG 21181 30 100.0 36 .............................. TACAGCCCTTGCCCTATTATATTTGTTTCAATCCCC 21115 30 100.0 35 .............................. TAATCTTTATTAAATGTTTTATCAGTTATCAAAAG 21050 30 100.0 36 .............................. TTGAAATAAAAAAGGGTAATGATAGCAAATGGCATG 20984 30 100.0 37 .............................. AGGCTTTTTGATAGGTTTAACTGCATGGGGTCTTGGC 20917 30 100.0 37 .............................. ATGAACGACGGAGAAAAAGTAAAGATAGCGAGAGCAG 20850 30 100.0 35 .............................. TGTTGTCCGCAGCGCAGAGGAAGTTAAGAATATTA 20785 30 100.0 36 .............................. CTATAAGCCAGAAATCGATATTGAAATTGAATTAAA 20719 30 100.0 39 .............................. GCTTTTGAAATTGTGTCTTTGTACTTTCCAGTTTGAATA 20650 30 100.0 36 .............................. TGATAGGAATAAATCTGTTTTAGTGTTTCAAGAATA 20584 30 100.0 36 .............................. ATTGTAAAGTCTGTGGGATATTCACCACGTGCACTA 20518 30 100.0 37 .............................. TATTCCTGCGCCGGGAAAAAAGAACTGATTGTAATTG 20451 30 100.0 36 .............................. ACGAATTTGTTCGCATAAACAAATCCAATGCACCGT 20385 30 100.0 38 .............................. GAAGATCTGTACGCATATTTAGCATACTTGACAAATGA 20317 30 100.0 34 .............................. TAATCTCTAATCATTTTTTAACATCTCCTTTTTA 20253 30 100.0 37 .............................. TTTGATCAAGTTTTCTTAAATTGTCTACTGCTTGCTC 20186 30 100.0 36 .............................. TTTGGCATCTTCCTTCACCCTCCAATTTGGTACTTA 20120 30 100.0 37 .............................. TGGTGGCGGGGGATATAGATAAAATTTTCTATAATAA 20053 30 100.0 36 .............................. TCTATCATTTCAAGTTCTAAATTTTCTTCTAGCATC 19987 30 100.0 37 .............................. GTTAGAAACCACATTTCTTGATTTCCGCCAAGGGTCG 19920 30 100.0 36 .............................. GATATAGTAAAAATCATACACAGGAATTTGAAATCT 19854 30 100.0 36 .............................. ACTGAAAAAGTAGAAAGAGCGAAAGCTAATCCAAAA 19788 30 100.0 37 .............................. CGAATAAGATATTTACCGAGCGTGAGAAAGGTTTTGG 19721 30 100.0 37 .............................. ACCGCTCTGGCAATTTTTACTTTTTCTCCGTCGTTCA 19654 30 100.0 36 .............................. AATATTGCTACAAATGTTTTTATTGTATTGCTACTC 19588 30 100.0 36 .............................. GTGCAGTTTTTCTTTTACGCTTGCAGCAGACGATGA 19522 30 100.0 37 .............................. TACTGTCGTGTCCGTTCTGGTGTATAAGCATGTCCGG 19455 30 100.0 36 .............................. CAAGCTGACTATCACTAAAAAACACAACGTTTTTAG 19389 30 100.0 38 .............................. GATTTTATAAATTTTGGCAATAAAAACTCCTTATATCG 19321 30 100.0 35 .............................. TGTCTATTATTTCTTTTATTTTTAATCCTCCTCTG 19256 30 100.0 37 .............................. CTGATACTTGGAACGGTATAACAACAACAGCAACAAA 19189 30 100.0 37 .............................. TGCAATAGTCCTTTCGTAGTTTAGACTCCTTTGTGCG 19122 30 100.0 37 .............................. ATAGACTTGTATTTTAAATATAATGAGGAAGATAAAA 19055 30 100.0 35 .............................. AATATAAACCTGCTTCTACTTGCAATCCGTCTATC 18990 30 100.0 38 .............................. CTGGGAGCATGTATAGTTATATGCCTAATCTAATTCAG 18922 30 100.0 38 .............................. TGCCCAAGATAACCAGCTACATATTGATCCGGAATACC 18854 30 100.0 36 .............................. GTGCAGTTTTTCTTTTACGCTTGCAGCAGACGATGA 18788 30 100.0 37 .............................. TTGTCTTAATTTGTTCCTGTTGTTGTGCTGTAAATGA 18721 30 100.0 36 .............................. ATGGCATCTCAACAACGGATGGGCTGGTATTGGATA 18655 30 100.0 36 .............................. ACAGAAAAGCAGTAAGACAGGCAGAATTTTATAATG 18589 30 100.0 35 .............................. ATTTATTATATCTGCTTCTTTTTGTTTTATATCCA 18524 30 100.0 37 .............................. TTTGAGCAATGTGACATCTGTGGTTCTGTATTCGACC 18457 30 100.0 36 .............................. ATGTCTTTGATAAATTAAAAGATATTCCTGGAGTCT 18391 30 100.0 36 .............................. AATACACAAGTTCTGTTGCTCTTTCTTTAGTTACGT 18325 30 100.0 37 .............................. AAACTTAATTCAATTCTATCTTTATAAACTACAACCT 18258 30 100.0 36 .............................. TATAATAACCAATCTAACTGAGGACGATAAAAACTA 18192 30 100.0 38 .............................. CTTGGCGACAAAGTAACTGTAAAAGGTAACAACTACTA 18124 30 100.0 38 .............................. GTACCATGTGCAATGTATATGTTGTCTGTTATTTGCTC 18056 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 82 30 100.0 36 GTTTTTAGCCTACCTATAAGGAATTGAAAC # Left flank : GACAGTGATGATGACACGCCAAGCGTAAGCAATTTTAAACTTATTGATGATGAATACTACAAAGTAGACGTGTTTATAGAGTATAATGAAGAAGCAATTAACATATGGCAAAGGTATATCGATCTTAAAAAAGTAAAAAATTTGTATAAAAGGCGGAGCATATTTGATGAATTTAAAGCTGATTTTTATAAATACGTAATATCAATACCAGAAAAGACAGAGAACATGCCTGCAGAAGTAGAAGGATTCAAATATGTCAATGCCGATTCTTTAAAAGATTATTATGATGCTGAAACAGGGTTTAAGCCAAATGGCGTATTAAGCATCTGGTAATAAAATGCCGTCGATGTCCAATAGTGCAAAAAATGCTGGACATCGACGACACTTTGCCATAACGAAAAGTTGAATTTTCGGCAATTTGTGGTATAATAAAGGCATAAGCTTTACAAAAGACACCTTTTATGCAAGATAAAAGTGTTGAATTTTCTGTGCTCTAACGC # Right flank : GGAGGGATTCTTATGTTTAGAAATAAATACAAATTAATGGTATCTATCAGTATAATTGTATTGTTTTTATTCGTAAATGTATATGCTGTACCGTATATAAAGTTAGTAATAAACGGACAGCAAGTCAATACAGATGTGCCACCACAAATAGTAAACGGTACAACATTAGTGCCAATACGTGTAATATCCGAAAGTTTAGGTGCTAAAGTTGACTGGGATGGAAACACCCAAACTGTCAGTGTAACAATGCCGAGAGAAACCTTAGAAGCTCACACAGTAGATACCTTTTGGGAAGCATACGGTTCAGATACCGTAACAGAACCTACAATAGATGATTCTGTAACACCAGAATTTAAAGCTGTCTTACAAAAAGCTTTGGCACTTCTTAAAGAAAAAGATAATAATACGTATAAGTTTGTTTGTGTGTATATTCCAAGAATAGCTGTACAACAATAATAACATTGTTGGTTCTTGGGTAGATTTTACAACAAACATCGTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 12633-13806 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBKT01000014.1 Thermoanaerobacterium saccharolyticum strain NTOU1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 12633 30 100.0 38 .............................. ATAATACAACACCTAAAACCACCGTTTTGATCACATTC 12701 30 100.0 36 .............................. CTTCCGACATGTACCCTAAAATGACCAGGTTGATTA 12767 30 100.0 38 .............................. ATATGTTAGTGCCATTTGGTAAAAATTCAACAAAAAAA 12835 30 100.0 37 .............................. GCTCAAAAAATAGATATAAACGAATACAAGACAAAAG 12902 30 100.0 37 .............................. TTCAGATCGTTAAAATTCCCTGTAAATACATCCTTAA 12969 30 100.0 36 .............................. TACGTTGTTTTTTAAAAAATCAAATACTTGTCTAAT 13035 30 100.0 46 .............................. ATWATATATAAGTAAAAAAAGGCATATTCAAAAACTTTATTTTAGC 13111 30 100.0 35 .............................. TTTTACAGTGTCGACGGTTTTACGTCGACGGCTTC 13176 30 100.0 37 .............................. GTTTTTTTATTTTTTTCTAAGTCTTGCACAATTGCAA 13243 30 100.0 37 .............................. ATCTCTGGCAAATGTGTTTTGCCGACACCGCTGCCAG 13310 30 100.0 38 .............................. CTGGGTCTACATGCATTGCTACCACATTTGTATCTGTC 13378 30 96.7 37 .............A................ CAAGTAAAATAATGGTTTTCACAATCCGGGCAGATAA 13445 30 100.0 36 .............................. TTTCATCAATATTAGCTTGCTTAAAACCGTTAGCTT 13511 30 100.0 36 .............................. TTTCTCCATTATTCGCAAATATAACTTTTGCCATTT 13577 30 100.0 38 .............................. TTGCTTGTTGCATAACATCATTATTTTTGAGTTGTTCA 13645 30 100.0 38 .............................. TTGTCCAATCGGCATAATTGTCGTCATGGATACCATTG 13713 30 100.0 35 .............................. ATTAAATCGAAAATCTTATCATACATAAAGAACAA 13778 29 83.3 0 ....................A..C.-..GG | ========== ====== ====== ====== ============================== ============================================== ================== 18 30 98.9 37 ATTTTTAGCCTACCTATGAGGAATTGAAAC # Left flank : TTGTTTGTAATGTTTTATTCTTTGATCCAGTGAATAGTTGTATAATTTGCGGCACAAATACAATGTATAAAAAAGCTTTTCTTCTTGTTCTTTTGTTGGCTCTATGAGAAAATGCTGACATATCATCATTCTTTCTCACCTTGGCTTTCTACAATAAAATTTTCTGTATCTATTATGGAATATTATTCTACGACAGACAATAGAAATTCATCTCCTACCTATAGAGGATGGGAGACTTCTTTCATGCTTTTGTTAAAATTCAAGAAGGAATTTGGAGAATTATGTAGAATATATATCATATAAAGTTGTTAGATTGTGTAGTAAATTGTCGTCTACATTAGATAATGCAAAAAGTGTAGGGCATCGACGACAATATAGGAATTTATGCTTTAAGTTTTTATCAGGAAGAATGAGAGATTACTAAATCATCAAGCAAGAGAGCTTGACATTGATATGTTTTCTTGCAAAAATAGAATGGCTTCATAAGAGGAAGTGGATGC # Right flank : GCTATACGCTAGTAGGGGATGATGCTGTTTAAATATGTGTTTTTAATTTATCTGATAAAAACCAATAAAAATATACTTTAGAGAAGGAAATTGATATAATATGTCGAATTAGTTATCAAAATGCAAATTGATAAATAATGGAGGTAGTTATGAATGAATGTATTTATAGCGTTAATAGGTTCGAATCCTTTGCCTATTTATGCAGTGTTAAATTACTTATTAAATGACAGCAGGGAAGATAAAAAAGAATTGCCATGTCCGGATATCGCATTATGTGTTCATTCTGAAGATACATGTAAGTATTTTGAGAATATTAAAAAATTAATCGGTAATAAATTAAAATTTGAACAAATTAATTTGGGGTTTTATGAACGTGATCCAAAAACGATAAAGGAAAAGATAAAGAAAAAATTGTCTTCATTAAACCAAGAAAATTCTAAAAAGGATACTATTGAATCTATTCATCTGAATTATACAGGTGGTACTAAGGTTATGTCTGT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 3582-14076 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBKT01000050.1 Thermoanaerobacterium saccharolyticum strain NTOU1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3582 30 100.0 36 .............................. ATTTCAGAATGAGAATCCCTTCTTTTTATATCCTCT 3648 30 100.0 36 .............................. GGAACCATCTTAAAATCAATATCATAAAGACCTGGA 3714 30 100.0 37 .............................. ATAAGTTGATTAAGCAAATTATTTATATTAGTATCAG 3781 30 100.0 36 .............................. TAAAGTACATAAGTATAGTAATACTGCTATATATTT 3847 30 100.0 37 .............................. GTTACTTATTCTGCTACTTTTGCTTCTCAAGATATGA 3914 30 100.0 35 .............................. TGATATACTTTTTACCCTTTTGAGTCTCACCTTTA 3979 30 100.0 36 .............................. ATTGGTTCTTATATTCCTGCTGATATGTCACAAATT 4045 30 100.0 37 .............................. TCTTTAACTGTTGCTTTGCCTTCTGTTCCAGACATAA 4112 30 100.0 36 .............................. GTGTTAACATTGCTTTTTATTCTTATGTATTTTTTA 4178 30 100.0 36 .............................. ATTAAATTTTTCTTCTATTAAGAATGATAAAAAGCG 4244 30 100.0 36 .............................. TGATTTTTTGCAATATCTCCTATTGCGTTACCTGTG 4310 30 100.0 35 .............................. GCAATTTACAACCAAACCGATGGGCTTGTAGGGCA 4375 30 100.0 37 .............................. TATTTTTTGGCACTAAAGATTTAGCATCTTCTAACAC 4442 30 100.0 37 .............................. TTCACAGCGAAGTGCGCTTACTGTGGAAAAGAATTTA 4509 30 100.0 36 .............................. ATGTGTTGGTAATAGTTAAAATTTGATTTTTTCTCA 4575 30 100.0 36 .............................. CAGGCAACGCAGGCTTTATTAGATCTATCGCAAAAA 4641 30 100.0 36 .............................. TGTAAGATATCCCGGCGGTTGCATTTCACCTGTAAT 4707 30 100.0 37 .............................. AAAAAATTTTAAAGGAGGAAATTGAAATGAAAATGGC 4774 30 100.0 36 .............................. TTGACCAATCTATTAATATCACAACGTCCGAAAACG 4840 30 100.0 37 .............................. AAGTATCCGCCTAAAACAGTCATAATCGGTGCAATCA 4907 30 100.0 36 .............................. TATTGTAATTCTGGCGTACTTAAATAGGTTACAAAT 4973 30 100.0 40 .............................. AATTTCCTATATGTTAGACCAACTGGTAATTTTATTGTCA 5043 30 100.0 36 .............................. ACAAAAATATTACAGATAATAACAATAACATACATT 5109 30 100.0 36 .............................. TTAGCATAAGTAGAATCAACAACAGAAGCATAAACT 5175 30 100.0 37 .............................. TACAGAATATCCAGAAAATTCCAGTAATCACATTCTG 5242 30 100.0 36 .............................. ACAACACAACAACAAAATGGAAGTGTTAAATAATGA 5308 30 100.0 35 .............................. AAACAATAGTATTTTGTCTAAAATAGATCCACTTG 5373 30 100.0 34 .............................. TCGGTTGTGTTTCCTCTTTCGGTTTCATTTCTGC 5437 30 100.0 35 .............................. TCGGCTGCAGTTCTGTTATTTGGAAATGACATAGC 5502 30 100.0 37 .............................. ATCAAATACTTTTGAGGAGGTGGCTCCTCCATGTCAA 5569 30 100.0 36 .............................. GAAAATCCTGCAAAAGAGGTGCAAGATCCGCCAACA 5635 30 100.0 36 .............................. GTATTTTGTGGCGCTTGTTGTGTCTGCTGCAAATTA 5701 30 100.0 36 .............................. TGTGTAGACCCACGTTTTAATCTTGTTACAAGAGGG 5767 30 100.0 38 .............................. TCTGAAATGCTGTCGTGTTAAATGCTACGCCTAACACG 5835 30 100.0 37 .............................. ATCACAGTACACGGTTTGAGACATACAAATGCAAGCA 5902 30 100.0 35 .............................. ACACATGTGCAACTATTTCTTTGACATTGTCTGGC 5967 30 100.0 36 .............................. TTGAGTGTCATTTCAATATCTCCTTCCCACTATAAA 6033 30 100.0 35 .............................. GCGATCTCTGCGTAACTGTAAAATTTGTCTACAAA 6098 30 100.0 36 .............................. ATGTTGTTCGTACCTGCTGGTATAGCAGGCAGACTA 6164 30 100.0 36 .............................. TTTATTATGAGGTGGAAAGGCAAAAACGAAATTATA 6230 30 100.0 36 .............................. ATATGTGACTTTATGTCCTAAAAGAACATCTATTAA 6296 30 100.0 35 .............................. CCTTCAAAATTTGTATGAATTTTTCGGCATCTTCT 6361 30 100.0 38 .............................. ATAGATTATGATTATAAAAACTTAATTAATATTCTTGA 6429 30 100.0 35 .............................. ATATTGTTTGCACCCGCAGGCAATGCAGGCAAACT 6494 30 100.0 36 .............................. TTATATTTTCCATCTGCTGATTAACAATTTTAATTA 6560 30 100.0 36 .............................. CTAAATTCAAATAATGTTGGAAATATTCAACTTGTA 6626 30 100.0 36 .............................. TTGTGAATGGTCTTAATAGTGCTATTCAGTATATTA 6692 30 100.0 37 .............................. TAATACTTATAAATCTTTTGTTCTATCAAGTCCATCT 6759 30 100.0 36 .............................. TTGACTGCGTTGATTAAAGTTGATTTATTCTTCTCA 6825 30 100.0 37 .............................. TCACTTGCAGTTCTATTGTTTGGAAATGATATTGCAA 6892 30 100.0 36 .............................. AAGTATACTTATAGAAGACTATGGATTCGATAAAGA 6958 30 100.0 37 .............................. AAAAAAAAGAGGTTGACGGACATTTTGAGGAAGTAAC 7025 30 100.0 36 .............................. TGAAGTTATGGGAAGTATTCCACAAATAACATTATT 7091 30 100.0 37 .............................. ATAAATTGATTGTTTTGATATACAAAAATGATAATAC 7158 30 100.0 37 .............................. AGTCATAATCTAGCTGGAATTGGTGCGTTTGACAATC 7225 30 100.0 36 .............................. TATAATTAGCATAATATTCACCATAAATGGTTTGTC 7291 30 100.0 37 .............................. TACTTTATTCTATCTCAGTGGATATTAGAAACCGGTG 7358 30 100.0 35 .............................. GAATATGATCCTGTGCCTTGGCCTATTGCTGTTGA 7423 30 100.0 35 .............................. TGAATTTATTTCAATTATACCATCTGATAATCCAA 7488 30 100.0 36 .............................. ATGATTTCTGTGACTAATTTCATTTGTTGCAAAGAT 7554 30 100.0 37 .............................. GCAACACTTGAAGCGATAGACCATCTTAAACACATCA 7621 30 100.0 36 .............................. TAGAAGAAGAATTTCAAAAAATCTATCCCGTCATTG 7687 30 100.0 37 .............................. TGTGTCGTATTGTAAGCAAATGTGCTTATAATTTTTG 7754 30 100.0 37 .............................. AAAATTCCCAAAATTATATTCTGTTTAAAATTTTCAG 7821 30 100.0 38 .............................. GGTGTTTCTGAAGTATTTCAGAGTGTATAAAAAAATAA 7889 30 100.0 37 .............................. AGACTTGTCTGGTCTGTTGATGTAGTAACAACAGATG 7956 30 100.0 36 .............................. TGATGCCTTTCCTTGTGTTATGTCTGTTGAAGCAAG 8022 30 100.0 36 .............................. TAGTCTGGTATATATATTGCTGTATCATTATAATTT 8088 30 100.0 35 .............................. AAAATGTGTAATTTGTCTACTTGATAAGCTACTGC 8153 30 100.0 36 .............................. TCGTATTTCACATTTGATCCAGTCATACTATCGTAA 8219 30 100.0 37 .............................. CCGAAGTATGACTTTTGGTATTACAATACAGAAATGG 8286 30 100.0 36 .............................. CAGGAAACGGTACACTTATAGGCATAATAAAAAGAA 8352 30 100.0 36 .............................. ACAATACAGCAACAGTGTCAAGCAGGATATAACACT 8418 30 100.0 35 .............................. GCAATATAATTGAGAATCTTCTTACCATACTTAAA 8483 30 100.0 35 .............................. TTATTTTGTTGGCTAAGGATGAACGGGTATTATTT 8548 30 100.0 35 .............................. TTAGAAGTGAAACCGAAGGAAGAAAAACCGAAGGA 8613 30 100.0 36 .............................. ATAATTGTTTCTATATTAGGAGGAATAGTAACAGGC 8679 30 100.0 37 .............................. TTTGCAAAATCATTCACAGTTTTCGCATTCATTGCTT 8746 30 100.0 35 .............................. GGCAAACCTCTTGGAAAACAAAGACCAAGAGTTTT 8811 30 100.0 36 .............................. AGTCTATGGATAGACTATCTATATCGTATCCATACC 8877 30 100.0 36 .............................. TTTTTATATTTAATAGTTTACATAGTAACATATATC 8943 30 100.0 36 .............................. ATATAATATTGATAACCTACATCAGCATCTACAACA 9009 30 100.0 37 .............................. GCATTGTTATTGCTGTAATTGCTAACCCCAATGGCCC 9076 30 100.0 37 .............................. AGAAAAACAGGATTAGATTATTTCCCACATGATGTAG 9143 30 100.0 36 .............................. TAGGCACACTAACGCAAGTATTATGATTGCAAACAA 9209 30 100.0 36 .............................. TTGATGAAGTATTAGACAAATACGAGTTGGCCCAGA 9275 30 100.0 36 .............................. TATTCTGTATCTTCCCACCATTCACCACACAATTCG 9341 30 100.0 35 .............................. GCAATTGATCCTCCAAATACTAAAGATACACCACA 9406 30 100.0 36 .............................. ACAGGAAATACATCCAGTCTTCCACAAGCTGGACAA 9472 30 100.0 37 .............................. ACAGTTACAAATACACAATCGACTGTAAATCCACTGC 9539 30 100.0 37 .............................. AACAACAAATTAGTTGTAGACAAAATATATTTGTTTG 9606 30 100.0 37 .............................. GTGATGTTATTAAATGTTACCTTTAACCAAAATTCTG 9673 30 100.0 37 .............................. ATTTGGGTATCTCACATGCTGTACTAAACCAACTTTA 9740 30 100.0 36 .............................. AGAGCAAATCAAGGAATTAGAAAGCATCTACGAAAA 9806 30 100.0 36 .............................. AAGAACGAAGGAGAGATAGATATAATTAATTGCGAA 9872 30 100.0 37 .............................. ACAGATATTATTTTAGAAGAAGTACAAAAATTAGAAG 9939 30 100.0 37 .............................. ATCGGTTTCCTTTCTGTCTGGCGGTATCTGCCAGTTT 10006 30 100.0 36 .............................. CGTTATGTCATTTTTTCGTGGGTATACTCTAGTTCA 10072 30 100.0 36 .............................. TATTTTATGCCAATATAATCTAAAATCTCGTCTTTC 10138 30 100.0 36 .............................. CAGATAGGACAGTAAGTATATTCTTTAGATATAACA 10204 30 100.0 37 .............................. TTGTTCAAGAGATGAACAACCCTTGTTCATGTAGTGA 10271 30 100.0 36 .............................. TATACAATGCCTTTTATAGCTTTTAGAAAGCTAAAT 10337 30 100.0 36 .............................. TTTGCATTTGCTTCTTCAAGTTGCTGCCTCAGCATT 10403 30 100.0 37 .............................. GGAAAAACATCGTGCTGTGGAGAAAGAATTTGCAAAG 10470 30 100.0 37 .............................. AAATATATTAAAGCAGGCCCTATATTTGCGTGTAATG 10537 30 100.0 36 .............................. CATAGCGGCGGATGGCGATGATTAAGATAGATTTAA 10603 30 100.0 38 .............................. GTGGCCCAGACCCGAGATTATTAATTATCTAACTAAGC 10671 30 100.0 36 .............................. TATTGTATTTATTTAAGGAAATCCAGAGCAGACATG 10737 30 100.0 36 .............................. TATCAGGATTGTTGTACAATTCTCCTCACTTCCTCA 10803 30 100.0 36 .............................. GATGTAAATATACCCTTTGATAAAATTGTCCTTGTC 10869 30 100.0 37 .............................. GGGTCTATAACAATTGTTGGATTTTTTGCAGTTGTTG 10936 30 100.0 38 .............................. ATAGTAACCGTATTTTGTGAATTATCAATTTTAACTGT 11004 30 100.0 36 .............................. ATAATGGCCCGATTAGTTTATAAAAAATAATTGAAA 11070 30 100.0 38 .............................. CCAACTATAAATGGCTCGTCAATACCAACTGTCTGGCC 11138 30 100.0 36 .............................. TACGTTGTTTTGCTATGATTATTTCTGCTATATTTT 11204 30 100.0 36 .............................. CTACAAATGCTGCTTCCCTTGCCAATTCCTCGCCAT 11270 30 100.0 36 .............................. TATGTTATGCGCTGTTTGTTGTGTATTAGACCATGT 11336 30 100.0 37 .............................. CGTAGTTTTTAGAAGCCAAGGAGGCTTGACATTCAAA 11403 30 100.0 36 .............................. TAATGGATTTACATTGAAATGTTCCGACATTGAAAG 11469 30 100.0 36 .............................. TTTTTAAGTATGTCTCTATACAAGTCTTTATAATAT 11535 30 100.0 36 .............................. TTGAGTGAATCTGCTATTATCTTGACTATATTGTCG 11601 30 100.0 35 .............................. GAAGAAATTGGTGAAAGAGTATTTATTCAATCGTC 11666 30 100.0 35 .............................. GAATATGCGAAAGTCCTTGAGGACTTGAAAAACCA 11731 30 100.0 36 .............................. ACAAAAATGTATTTCTTTGGTATTGACTCTCAAATA 11797 30 100.0 37 .............................. GTAGTCATAACTACAAATTACAGAGGGAAAGAGCTAG 11864 30 100.0 36 .............................. TAGATACACGTCCTTTCTAATAGCAAAAATTAAAAA 11930 30 100.0 36 .............................. TTAAAACAAGTGCCACAATGCCACGTTCTCCACGCT 11996 30 100.0 36 .............................. AGAGAAATTCAAAAAGATGTTGAAAATGTCTTAAAA 12062 30 100.0 35 .............................. TATGGTGAGGTAGTTTGTAAGCACCTTTGTTCTCG 12127 30 100.0 37 .............................. GGATGATCGCACCGCCAGGCGCCAAACGTGTCCGCAG 12194 30 100.0 36 .............................. GATGCTAACCGAAAAACCTCATAGATTTTTAGTTGT 12260 30 100.0 35 .............................. AGATGACATATTAGCAACATTCGGTGTGCATGCTT 12325 30 100.0 36 .............................. AATTCCCGTTTCTGTGTTTTGCAACTATCAATTTGA 12391 30 100.0 35 .............................. GCATGTAACACTTGGCAAATATATTGAATATTGGC 12456 30 100.0 36 .............................. TACAATGCATCAGATTACCTTTGCTTTACTGTACAA 12522 30 100.0 36 .............................. ATTACAATACATGGTTTAAGGCACACTAACGCAAGC 12588 30 100.0 38 .............................. ACGCCTGCCAATTTGTTTTAGGTGTTTGATATGCCATC 12656 30 100.0 38 .............................. ACAAGTGATTTGATGCTTAACGGTATTCCACAGATAGA 12724 30 100.0 36 .............................. TGTATTTCAGGGGGTGACTAATTAATGCAAATAGCA 12790 30 100.0 36 .............................. AAATAATTTGTTACGTCCAAGATGTGTTTCTTCATA 12856 30 100.0 34 .............................. AAGGCTGCCATAACTGCTAATTGTACACCTGCCG 12920 30 100.0 37 .............................. AAAAAAATCTCTTCTATTCTAACATTGAAAAATTCAG 12987 30 100.0 36 .............................. GCATCTTAATTTCCTTCAACTTCTCCATTGAAATAT 13053 30 100.0 37 .............................. ATTATAGTACAAGAAGGGGTATTTGTATGGGACGAGG 13120 30 100.0 36 .............................. TTTGGATCGCCCGGAAAGTCCAGCTCTTCACCATCA 13186 30 100.0 36 .............................. TTCGAATATCGAGAGGGGTGGCAGAGATAAAGTACA 13252 30 100.0 35 .............................. ATGCCTTGTGCTGTCATTTTTTCAGGCGTAATCAT 13317 30 100.0 37 .............................. GGCCCTATCAACCTGAAAGCGTGGATATGCGGCTGCT 13384 30 100.0 37 .............................. TAATTATTAACTTTAAAGTAAATTTCTATTTTTTTTA 13451 30 100.0 36 .............................. AAAGATGAAGTTGAAGGTTTAACGGAAGATGACATA 13517 30 100.0 36 .............................. TTATTTAATTATAATACTAAAATGAATTAAAATGGG 13583 30 100.0 36 .............................. ACAAAAATAGAAAAAGAAGGCAAAGAAAAGATAAGG 13649 30 100.0 36 .............................. GTGGCTTTGCAAATTGTATTAGCCTTGGTAAACGGC 13715 30 100.0 37 .............................. TATTATTTCCTCCTATATGTGTAGCTATTTGATTCCA 13782 30 100.0 36 .............................. TTAGCACGACGCTTAGGCATTTAGCTCACCTGCCAC 13848 30 100.0 35 .............................. TTGGCGTTAATGTTGTACAGTATACTACTCTTGGA 13913 30 100.0 36 .............................. TCGGAGGTGAAACGATGGAAGAATTAGACTCAAAGA 13979 30 100.0 38 .............................. GATATAAGGTAGAAAAGGAGGGACGAAATTGAAGAAAC 14047 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 159 30 100.0 36 GATTTAATCTAACCATACTGGAATTGAAAC # Left flank : CATAAAAAATAATTTAATTGAGAAGTACTATGTTTTATATAATACACTTCCAGATAATTTGAATGTAAATATAGATTTTGATATGAATTATTATATGAAAAATCCAGATGGTAAAAGAATAAAATTTAAAAATGTTTATGTTAAAGGGTATATGGTGCCTTTTAAGATGTCAGGCAATCCTGATTTGATAAAAGTAGCATACGAATGTGGATTAGGGGAAAAAAATAGTGCTGGATTTGGAATGATACAGAAAATAAAATGAATAATTATAAAAATCAAATCTTTGTCGACCTTTCTCGATGTAAAAAATGCAGGAGGTCGACAAAGAAATTGATAATGTAAAAGATTATTGTTTTTTGTTACTGAAGGGACAAACGATGAAAATTGAATTTTTATACAGTGCTAATAAATGGACTGTATGCCTAAAAGATATTGAAAAATAACTCATATTGTGTTAAATTGAATTTAAGCAAGAAAGTATTTTCATGCGATTTTCCTGG # Right flank : CTGAAGCTTGTTTAACCTTCTTGCAATTATTGCAAAAGATTTAATCAAGGTCGTAAGAATAATCTTAATAATTACCAAGTTATACCCAAGGGTGAATCATAGTATGGTAAGTTATATAAAGCTATCATGATTATTACAGGGCATAATGGTAAAACTGCAAAAATAAAACCGATTGGATAATAGATAAAGGTTCAGATATTCCACGATTGACAACAATTTATGCGGATTGAGGTGATAATATGGAGATAGATGTGTTAGATGTTGTAAAATTAAAAGATGGGCGAGAGGGGACGGTAGTTCATAAATACCATGCGGGTGTCTTACCGCAAGCATATGAAATTGAATTTAATGACAACACTGAAACGATAAAAGAAAATGAGATAGATAAAGTATTATGGAGGGCAAAAGCCCATTAATAACCGCTAAGGCATGATAGGCCGAGGCGGTATCGTTTAATTTAATCATAGTGGATCTGTAATGATTCTAAAAAAAATTTGAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTAATCTAACCATACTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //