Array 1 12423-13812 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF236949.2 Meiothermus ruber H328, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 12423 35 100.0 43 ................................... TATCAAACTTATACGCTGCGTTTACTTGGGCTAAGTCGGGTAG 12501 35 100.0 40 ................................... CCATGCTTCCCAGGGCAAAAGGCCTTGGGGGTTTCTCTGT 12576 35 100.0 45 ................................... TGGCCCAGATTACCAGTGCTTCACGGTAGGTAGTAGCCGTAGCTA 12656 35 100.0 42 ................................... TCATAGGGCACGGGCACTACCGCCCGGTGGCTGGTCTCCTTG 12733 35 100.0 35 ................................... TTCTTTGCCATCGGCGCCTCCACTTCGTGCCAGTA 12803 35 100.0 38 ................................... GGTTTGGTGCTGACTTCAAGGTAGTAGCGTACCACGTG 12876 35 100.0 40 ................................... TGGGCCCGACGCTATTCTTCGTACACGACCGCCCCGTACT 12951 35 100.0 41 ................................... CCATCTAATTTTAGTTCTCTCGAAATTATTGCAACAGTTAT 13027 35 100.0 42 ................................... TCGACCCAAGGCAGGTGGGCCAGCCTCACCGCACTCTCGTGG 13104 35 100.0 41 ................................... AGTATATTATAAGCAGTTTTATCATAATCTTTAGATACAAT 13180 35 100.0 40 ................................... TCCTCCAACCGCGACATTGACTCGTGAGGAGGTGGCAGCA 13255 35 100.0 38 ................................... TAGATTTTATATTGCGCACACTCATGTTATGCATACTC 13328 35 100.0 42 ................................... AGGATCGATAGAAGGTTGTGGCGTTCCTCCGGGGGCAGGTAT 13405 35 100.0 39 ................................... GCTTCTTCGCTCAGCGCGGATTGTCTCCCAAACGTTCAC 13479 35 100.0 37 ................................... TCGAGGAATTCCTCGACGTCCTCGATACCAAAACCAA 13551 35 100.0 40 ................................... TACTGGATTTCCTAGCGGGGCCGATAGCCGCGGCCGCCGT 13626 35 100.0 38 ................................... CAGGGTCGGCTTATTGAGTTGCCAAACGGCGTAATCGT 13699 35 100.0 44 ................................... TTGTCAGCTCAAGCAGCTCGTTAGGCAGTAGCGGCGGACATTGT 13778 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 19 35 100.0 40 GTTGCAAACAAAAAGCCCCGTAAGGGGATTGAAAC # Left flank : GGGTAGCCGCCTCGGGCTTGGGCAGCGCGTCCAGCAGGTACTGCTGGATGGCCGCCCGCACCTGGGCCGGAGAAAGATCGGCAACCATGCCCAAATACTACCCCCACCCGCCCCCGCCCGACACCCGTTACAACGAGCGTAAACCCCGCCCCACCCGCCAAAAATGCCTGCGCGATCGCACCCCACCCCACACAAAACCCAACCCGAAGCCAGTCCAGCACAGCACGGAAACACTTTCACCAAATAACCCATTATGTTTTGCGCAAAATGCTATAATGCCTTTGTCGAGCATTTCGACAGCGCACTTTGAAAGCCAGCTTTTGCGATGAATAAGGCAAACCCACGCCACAAAAAATCTAAAAGTGTGGGAAAGTAAGCCCTCATCGCAAAAAACGCACTTTTTACCCCAGTTATCCACAGGGGGGCTGTGGATAACTCCAGTTTCTCATAAATACCCCCTCCAGCACCCCTGTACAGCACGGTGTTTAACGGGGTATGCT # Right flank : CCTTTAATGTCGGCATATGCTACCTTGATTGATGACTACAATAAGAGACGGGAGGTGCTTGGCCGACCGCACGTCCCCGCCATGCCCAGCAAAAGCACGAGCGAGCGAATGTATCGGTGATCAGAATGACAATCAGAAATGATCTGGATTACATATCTATGGTTGATCGTTGGGTGCTTATGACTCACATCCTCGAGATAATGCGTACGAAGGCTGGCTGCACACCCACTGCAGCTCAGAAAAATCAGATAGAGAAGATGCAAAGGTTTATTGAGCACTTGGAAGATGCGATAGCAGCTTACCGCAAGGAGCGTGGTAGGGCTCCTTCTTAATAGCCAGCGGACCTGGGACGGCCTGATTGCCCCGGTTCTTTTGAGGAGCGTTGGTTGCAAACAAAAAGCCCCGCAAGGGGATTAGAGTCACCCCCTAAATGGCTGCCCTGGAAAGCTCGGTGGCTGTTTGGGGGTTTGGTTTTATTACCAAAAAGCTTCTAAAAAATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAAACAAAAAGCCCCGTAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.90,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 1468663-1467794 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF236949.2 Meiothermus ruber H328, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================================================== ================== 1468662 37 100.0 34 ..................................... TTAAGCTCGAGGTTCATGGCTATGCTGGGGGGGC 1468591 37 100.0 35 ..................................... AACTACTTTGTCCCAGATAGCGACGTACTGCTGCT 1468519 37 100.0 35 ..................................... ATCTGCGATTTAACAATGTGGCCGGCGGTGTGCTC 1468447 37 100.0 32 ..................................... TACTTTGTCCCAGATAGCGACGTACTGCTGCT 1468378 37 100.0 35 ..................................... ATCTGCGATTTAACAATGTGGCCGGCGGTGTGCTC 1468306 37 100.0 34 ..................................... TCACTGTCCAAGCGTACCTACTATCGGCATCGGC 1468235 37 97.3 34 ...............T..................... ATGTACCCGTAGGGTTCGCCGTTGCGGGCGGCCT 1468164 37 97.3 79 ...............T..................... ACCTACCCCGGCGACTGGCGTGGGGCCCTGGCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC 1468048 37 81.1 36 CCCC.C.C.......T..................... GCCGGCGTTGCGGCTCCCGAGGTAGCCGAGGAATTC 1467975 37 97.3 37 ...............T..................... GCGTCTAGGCGTTGACCCACACAATAGAGGCCAGTTG 1467901 37 97.3 34 ...............T..................... CTTGGTATCATCATAAAGATGCACCTATTATAAG 1467830 37 97.3 0 ...............T..................... | ========== ====== ====== ====== ===================================== =============================================================================== ================== 12 37 97.3 39 GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Left flank : TGGAACGGCTAGACATTCTGGTGACCTACGACGTAAACGTGACCTCCGCAGACGGTCAGGCGCGCCTGGCCCGTGTTGCCAAGATTTGCAAAAACTTCGGTCAGCGGGTGCAGATGTCGGTCTTCGAGTGCCGCGTCTCGCGGGCCCAGCTAGAAGACATGGAGGCCAAGCTGCTCAAAGTGATCGACCCGGACAAAGACAGCCTGCGCATCTACACCCTGCCCGGTGGTCGCGAGCGTTGTTTGCGCGTGCACGGTCAGGACAGGTACACTGATTTTGACGATCCACTGGTGGTCTAAGCCACCCTGGCACTTGCTTTGCGCGAACCCCAAGCAAGTGCCAAAACCCAGGGGGGTTCGCGCAAGCCGAGAAACTGGCTAGGGGACATTGAAAACCCGCTTTCCCTCCACCTTCCCCCACCCTGCGTCGGAAGCTTTTTTGGGGGGGTTCGCGCAAACGGCCTCTTGAGCCCCGTCCTGCACGCACGCTAGAATGAGGCC # Right flank : GGGTTTCCACCAGTCTGAGTTGCCACAGCGCCGCCTCGTTGCACTCGGGCGAAGCTTAAGCCAAAAACGCTTGTGAGCTAGGGAGGGGAACTCACAAGCGTCTTTAGAAGCACCCACTATAAGTGGGATGCATTATTTATGTCTGAATTGAACGTCTTTGGGTAGGTGAAGAAAGTCCTATATAAGTGGTTCAACTATCAAAGAATAACCGCAACAACAAAGGTAATAGCCAAAGTACCCACAAAAGCTGCGGCCAGGGTAATCCAAATTTTTCCACTTTCGCGCAGGTTCATACTCGACTGCACAGCCAGGTAGGCAAAATACACGTCAACAACCAGAGATGCGATCATCAGTAAGGGAATTAATAGGATGCCGATTAGAGTGACGATTAGAACTAGGTTTAGCACCGCAGTCAAAACGCTGATGGGCACCCAAAATAGCGCAAAAGTATAGGCCACATTGTCTAGTGTTCCGGTTCCTCCCTGGGACTTACCGACATA # Questionable array : NO Score: 8.69 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:-0.30, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Alternate repeat : GTTGCACTCGGGCGATAGCTCGAGTGAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.10,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA // Array 3 1486954-1487577 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF236949.2 Meiothermus ruber H328, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 1486954 37 100.0 34 ..................................... ACCCCGGTCCGCTTGGTGGCGCAGCGCCCGAAGG 1487025 37 100.0 37 ..................................... CTGTATAGGACCTCCCTTTCAACCTCCTCCAGGGCAA 1487099 37 100.0 36 ..................................... TTGGGATTTGCTCAAGCCAACTTCACTAATCGGTAG 1487172 37 100.0 35 ..................................... GTATGCGTATCCTGATTGCCTGTGAGTTTTCCGGC 1487244 37 100.0 35 ..................................... CGCGTGCGTGCGCGTGCGCGTGCGCGCATGCGTGC 1487316 37 100.0 33 ..................................... CCAGTGGCAACCACTGGTTTTCCTGCATAGCAT 1487386 37 100.0 36 ..................................... TCGTAGATCCGCCCTACCCGCCAGGCCCGGCCTAGC 1487459 37 100.0 44 ..................................... CTGAATCCCCGCCGGATGGCGGGGATTTTCTATTGCGTTGCACT 1487540 37 78.4 0 CGG.TG......T...G..............C..... | A [1487559] ========== ====== ====== ====== ===================================== ============================================ ================== 9 37 97.6 36 GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Left flank : CGGCCCTGCTCGGCCAGAGCCTCTAGATTTGCTCCCAGCAGCTCCAGATCCCTCACGCATTTTTCATCATACTAAGCCGTGGGTGGGCTGCCCAGCCCACCCTAGCCGCCAGCACAACATTTGGGAATGTCGCCAGCAGTTTGCCCCGGCACCGGAGCCGGTGCAAAGAGGGCCAACCCTCCCAACAACAGAACCAGCGCAACCAACCAGCCGATTTGCTTTTTCCCGAGAGCAGAACGTGTCTTGTTCATGCCCTCCAGCGTCGGGGCGGGGTATGCACAGTTTGTGCAGGGTGAGGTAATCTAGTGGCTAGGTAACCGCGCGAACCCCAAGCAAGTGCCAAAACCCAGGGGGGTTCGCGCAAGCCGAGAAACTGGCTAGGGGACATTGAAAACCCGCTTTCCCTCCACCTTCCCCCACCCTGCGTCGGAAGCTTTTTTGGGGGGGTTCGCGCAAACGGCCTCTTGAGCCCCGTCCTGCACGCACGCTAGAATGAGGCC # Right flank : CTCAGTCCTGGTCTGTGGACTCGCTGGGGTCGGGGGTTTCTTTGCGCGGTTTGAGCAAGGGGAACAGGATCACATCGCGGATGCTCTCTTGATTGGTAAGTACCATCGCCAGCCGGTCTATGCCCAGGCCCATACCGGCGGCGGGGGGCATGCCGTACTCGAGGGCCAGCAAAAAGTCTTCGTCGATCTCCGGTTCCTCGTCGTCGCCGGCCTCGCGGCGCTTAGCCTGTTCCTGGAAGCGCGCGCGCTGATCGAGGGCATCGTTGAGCTCAGAATAAATAGGGGAGATCTCGAAACCGGCCACAAATAGGTCGGCGCGCTCGGTGAGGTTGGTCTTGCTGGGGTCGCGGTGGCGCTTGACCAGTGGGCTGATGGCCAAGGGCACATCCACCACAAACGTGGGCTGAATCAGGGTGTGCTCCACGTAGTGCCCGAACAGCTTGTCCAGCAATTTGTAACTGGGTACGCTGCGCAGCTCGGGGTGCTTTTGATCGGCCCAG # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTCGGGCGAAAGCTCGAGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.10,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA // Array 4 2734338-2735024 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF236949.2 Meiothermus ruber H328, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2734338 37 100.0 36 ..................................... CACCCGAGGGGAGATCCACCGGCTGACCCGGCAGGC 2734411 37 100.0 37 ..................................... TCATAGCGGGCGTCGTTCAGCCATCGCTCCAGGGTGC 2734485 37 100.0 34 ..................................... TTCCTGGCCCAGTGGGAGCTGGCGCGTATGCTTG 2734556 37 100.0 34 ..................................... GTCAATATTGACAATCGCCCAGGTTTCGTCAATC 2734627 37 100.0 35 ..................................... CTGCCTTCTACACGGCTAATGGCCGTGGTAGTGCC 2734699 37 100.0 35 ..................................... TCAATGAGGCCTGTGTTGTGCACGTGGGAAAAGTC 2734771 37 100.0 35 ..................................... ATGGTCTTTTGCGCTGCGCACCCCGGCCACCACCG 2734843 37 97.3 35 ..............................G...... ACAGAGGCGCTCACTACAGCAATGTCGAAAATCCC 2734915 37 97.3 37 ..............................C...... GACCTGGCTTGGTCTTAAACCAGGCCTCTCCCTGGGG 2734989 36 94.6 0 .........-.....T..................... | ========== ====== ====== ====== ===================================== ===================================== ================== 10 37 98.9 35 GTTGCACTCGGGCAAAAGCTCGAGTGAGGATTGAAAC # Left flank : CTGGCCCGGCTCAAGGTGGCTACCCAGGGACGCTTTTTAGCCCTGCGCACCATCGGGTCTACCCTGGTAGGGCAGGGCCTGGATACCGCTATTTTCCTGCTGATAGCCTTCTATGGCATCTGGGACAACAACCTGCTTTGGACAGTGTTCGTTTCGAACTACATCTTTAAAGTTGGTATAGAGGTACTGTTCACGCCCATTACCTATGCCGTGGTGGGCTTCTTGAAGCGCGCTGAAAACGAGGATTATTACGACCGCAATACCCGCTTCAATCCGTTTGCGCTGCGCTAACAAATTAGTCTCGCATATCTGGTAAAATGCGCGAACCCCAAGCAGGTGCCAAAACCCAGGGGGGTTCGCGCAAGCCGAGAAACTGGCTAGGGGACATTGAAAACCCGCTTTCCCTCCACCTTCCCCCACCCTGCGTCGGAAGCTTTTTTGGGGGGGTTCGCGCAAACGGCCTCTTGAGCCCCGTCCTGCACGCACGCTAGAATGAGGGC # Right flank : CCATGATTCCTCTAGACGAGTTGGCCAGACTCTTTCCCCCTACGCGCCTGCTGCACAAACCCGGCGAGTTGGCGCCATACGAATCCGATGCGCTCACGGCCTTCCGGGCCCGACCGCTGGCGGTAGTGCTACCCGAAACCCATGAAGAGGTGGTGGCCGCGGTGCGCTGGTGTGCCAAGCATCAGGTGCCCTATGTGGCCCGCGGCTCCGGCACCAGCCTTTCGGGGGGCTCGCTGCCCATTGAGGGGGGCCTGGTCATTGGGCTCAACCGCATGAACAAACTCCTGCGGCTCGAGCCCCAGGAGCGCATTGCCGTGGTGCAGCCCGGCTTTATCAACTTACAGGTCTCGAATGCCGCCGCCCCCTATGGCCTCTACTACGCCCCTGACCCCTCTTCCCAGCCGGTCTCGACCATTGGGGGGAACCTGGCCTTTAACTCGGGCGGGGCCCACTGCCTCAAGTACGGCATGACCTCCAACCACGTGCTGGCGGCCAGGGTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTCGGGCAAAAGCTCGAGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.30,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : NA // Array 5 2985930-2985226 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF236949.2 Meiothermus ruber H328, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2985929 29 100.0 32 ............................. GGGAAGCCCATCCGCTCCAGCAGCTCCCGGTA 2985868 29 100.0 33 ............................. TATATGGCCTGCGACAACATCAATGCGGCAGTC 2985806 29 100.0 32 ............................. GGGAAGCCCATCCGCTCCAGCAGCTCCCGGTA 2985745 29 100.0 32 ............................. TAGTTTTCGGCGGTCTTGAGTTCCGGTTTGTC 2985684 29 100.0 32 ............................. GCGTGGGCACCAGAACAAAGCGGCCCGACTCC 2985623 29 100.0 33 ............................. TATATGGCCTGCGACAACATCAATGCGGCAGTC 2985561 29 100.0 32 ............................. GCGTGGGCACCAGAACAAAGCGGCCCGACTCC 2985500 29 100.0 32 ............................. TACCTTATCATCCCGTTCGATGGGGGCGATCC 2985439 29 100.0 32 ............................. CACGGGCATATCATTCAAATCAGCGTTGGATA 2985378 29 100.0 33 ............................. GCTGAGGGCAAAGTAATCACCTACGGCCTCTGC 2985316 29 100.0 33 ............................. GCCGAATACCTGCTTTCGCAGGCCCTGGCCGAA 2985254 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 12 29 100.0 32 GTATTCCCCGCACCCGCGGGGATGAACCG # Left flank : TCTTCGACGCGCTCGAGACCCCCGACCCCTACGCCGCCGACCCTGCGGCCCCAGGTGAGCTGTGGGACCCCGAGGGCCCGGTTCCGGGCGGGATAAGCTATGGTAGTGATCGTTCTGGAGAAGGTGCCGAAGACCCTGAGGGGTGAGCTTTCACGCTGGATGCTCGAGGTGAGCACGGGCGTGTTTGTGGGCAGCGTTTCGGCACTGGTGCGCGATTTGCTCTGGGAAAAGTGCATTGCCAAGAAAAGCTCGGGCCGCTGCTGCTTGCTCTACCGCACCAACAACGAACAGGGCTTTGCTATTCGAACCCATGGCGATACCACCCGCACCCTGATAGACTTTGATGGCCTGACCCTGGTAGCAGTGAAAAATGCCGAATGGGAGCGTATGCATCACAAGCGAAGCAGAAAAAGCAAACCAGGGGCGAATCTTGACAAAGTAACTCGGGATTCTGACACTTCCGAGGGGTCTAGCAGCTAATTTTGCTGTTAGAATCAAGT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //