Array 1 111632-109329 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJS01000019.1 Acinetobacter baumannii strain NFAb2 3444_DNA1_contig_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 111631 28 100.0 32 ............................ TGAAATACCTTTTCCATATCAGGTTCTTGACC 111571 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 111511 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 111451 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 111391 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 111331 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 111271 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 111211 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 111151 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 111091 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 111031 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 110971 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 110911 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 110851 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 110791 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 110731 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 110671 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 110611 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 110551 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 110491 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 110431 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 110371 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 110311 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 110251 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 110191 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 110131 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 110071 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 110011 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 109951 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 109891 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 109831 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 109771 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 109711 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 109651 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 109591 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 109531 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 109476 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 109416 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 109355 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 39 28 98.5 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 116722-121432 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJS01000019.1 Acinetobacter baumannii strain NFAb2 3444_DNA1_contig_19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 116722 29 86.2 31 ....G.......CC..............A GCCACGTCAACAGCAGCATTGGCATTAGTAA 116782 29 89.7 31 ....G.......CC............... CAAGTGCAGATGCAGCCTAATTATTCTTCTT 116842 29 86.2 31 ....G.......CC..............G CCAACCGTTGAAAGCTCTGTGGCTTTCTCAA 116902 29 89.7 31 ....G.......CC............... TATTGTGAGCACCTTGATTGCTGTGCGCTGC 116962 29 89.7 31 ....G.......CC............... ACAGCGGGAAACTTGAAAGTCATTGCGAAAT 117022 29 89.7 31 ....G.......CC............... GATTGCCCCCTGAGGAAACTGTATAAAGTCC 117082 29 86.2 31 ....G.......CC..............A AACACCAACTAAGCCATTCCCTATTCAAAAA 117142 29 86.2 31 ....G.......CC..............A TGAACTTTTAATGGATGCATGCGCCGCCCAC 117202 29 86.2 31 ....G.......CC..............A CGAACAACGATAATTTGGAATACACGCTCAT 117262 29 89.7 31 ....G.......CC............... CAGGAGAAAGATCGTTCAAAAGCTCAAAACC 117322 29 89.7 31 ....G.......CC............... GAAAGTTTTGATATCCACTCTGCTGTTTCAA 117382 29 86.2 31 ....G.......CC..............A GATGGTAAGAAAATTATTGAGTCTGGAGACA 117442 29 86.2 31 ....G.......CC..............C GACAGTCCAGTTGATCAGATCTTGATTAGAC 117502 29 86.2 31 ....G.......CC..............A ATGACATGGTTCAACAATTAAATTCATCTCA 117562 29 86.2 31 ....G.......CC..............G TTCTTTTCTGCAATATGTGCCATTAGGTATT 117622 29 86.2 31 ....G.......CC..............A TTTTAGATGAAACAAAAGATAGCAGGATTAT 117682 29 86.2 31 ....G.......CC..............A GACCAAGCGGATTGACCGTATTGATAAATAA 117742 29 89.7 31 ....G.......CC............... TCTGCAATACAAATCACTGGATCAGCCAGGT 117802 29 89.7 31 ....G.......CC............... GAGTCTTTGATTTCCCAAATATTACTTGAAA 117862 29 86.2 33 ....G.......CC..............C CTGAAAAATTTCACTGTGTCCATTTCGTTATTA 117924 29 89.7 31 ....G.......CC............... ATGTCTTTAAATTCTGAAAAAACACTTGTTC 117984 29 86.2 31 ....G.......CC..............G AAAAAATTGAAAACTTTTTAGAAGTAAATGA 118044 29 86.2 31 ....G.......CC..............G CCACACATGCCTAAAAACGCAAGTGCGCTCG 118104 29 86.2 31 ....G.......CC..............A TTATCAGATAAGCCTTTTATGAATGATCGTT 118164 29 86.2 31 ....G.......CC..............A TTAGCTATTAGCTTTTTGGCAACAACAACAG 118224 29 86.2 31 ....G.......CC..............A GTTCATGAAAACAGCTTTAAAAAGAAAGCAC 118284 29 89.7 31 ....G.......CC............... CCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 118344 29 89.7 31 ....G.......CC............... TGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 118404 29 89.7 31 ....G.......CC............... GGTACGACAACTACGAAAAGCTGAGCAAAGT 118464 29 89.7 31 ....G.......CC............... CAACTTAAATGGATGCTCCCCGCGGTGAATT 118524 29 89.7 31 ....G.......CC............... TGATTGCTAGACGGATTTTTAGGCAGATCAT 118584 29 86.2 31 ....G.......CC..............G AGTTTAATGCGCTATATGGCGACGAGGATTT 118644 29 86.2 31 ....G.......CC..............C ATGCAATCGCGTTGATTACCGCAGCTTCGAA 118704 29 86.2 31 ....G.......CC..............A TGAGCCGCAACCATACGGTCTATGACTTCCA 118764 29 86.2 31 ....G.......CC..............A TAGCGCCCTGCTCTATGTTGTCACTTCCGAA 118824 29 89.7 31 ....G.......CC............... CCAAGTGAATCGGCTCCTAATGCAAATGACC 118884 29 89.7 31 ....G.......CC............... GAAAACCAATATGCTGCCTAATTGCCATAAG 118944 29 86.2 31 ....A.......CC..............G ATCTGCGTCCATTTGTACTTGCTGCGGGTGC 119004 29 96.6 31 ............................A TATACAGCACCGCTTAGTGCGACGCGGTCAT 119064 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 119124 29 96.6 31 ............................A TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 119184 29 96.6 31 ............................A GAAGGCCCGTAATTTAACTGTAAGCCGTGGT 119244 29 100.0 31 ............................. CTTCCTGAGTTTTAATCCCATTTGCCTTACA 119304 29 93.1 31 ......T.....................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 119364 29 100.0 31 ............................. TCAGGGAATTATCGTGAAACTTTCATTGACT 119424 29 100.0 31 ............................. GCACCAGCTGCTGGCTGGTTGAAATCTGCAA 119484 29 96.6 31 ............................A GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 119544 29 100.0 31 ............................. GTTTCAAAAGCTACACCATCAAAACCATTGC 119604 29 100.0 31 ............................. ATTTAAGTAATAAGTTTAATAACGACCTAGT 119664 29 96.6 31 ............................A ACACGTTCTCTATATCGCTGTTTGCGGTCAT 119724 29 100.0 31 ............................. TCAGTTGGATATGCCTTTGATACCAAGAAAC 119784 29 96.6 31 ............................G CCTGCAGACACGGATTTACGCAGCTGATCGA 119844 29 96.6 31 .........................C... AACCAAACTATGTCATCGATCGGAGATTTCA 119904 29 100.0 31 ............................. TAAAATAAATGCCTGTGGTTTTTTCTTAACT 119964 29 96.6 31 ............................A GTTTCCGAAGTTGAATTACACTCGCCAAGTT 120024 29 100.0 31 ............................. AACACAGTGATTTGATTACCTTGAGCAACCC 120084 29 96.6 31 ............................A TCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 120144 29 100.0 31 ............................. CATCCACCTTTGATGAAACGGATCCACGCAA 120204 29 100.0 31 ............................. CTTGTGTGACGGCCTCCACTCCAGATCCCGC 120264 29 100.0 31 ............................. TAAGCTTCAAAAATAGCCATTGATTATAAAA 120324 29 100.0 31 ............................. GACAACTTTCCACGGCAATCAGGGCTTTCCA 120384 29 100.0 31 ............................. AAAGATGCACGTGGCCTAATGCAAGTTATTC 120444 29 100.0 31 ............................. TTAAAATTAGGTGCTGAGTTACCACGGCTCA 120504 29 100.0 31 ............................. AAACCAAGAACTTGAAGATTTTGATGCTTAT 120564 29 100.0 31 ............................. AAAAATAGTGTGTTAATTATTTATGATGAAA 120624 29 96.6 31 ............................C GTATACATGCACATCAATACGATATCCCGAT 120684 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 120744 29 100.0 31 ............................. GCAGCTACTCGACATGTTGGTAGGGCAGATG 120804 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 120864 29 96.6 31 ............................A GATTGAGGCGATTTTTATCGCGGACATTGCC 120924 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 120984 29 100.0 31 ............................. CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 121044 29 96.6 31 A............................ TATTATTAAACGGGAAAAGTATATTCTTGCT 121104 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 121164 29 96.6 31 ............................A TCATCAATAAGTTGGCCTTGATTTAAATAGT 121224 29 96.6 31 ............................A GATACAAACGAGTTCGCATCTCGACCAGAAG 121284 29 96.6 31 ............................A TTATCCAGATAAAACCATATCTACAAAGTGG 121344 29 100.0 31 ............................. CAACCTGAACACAGACATACATGTTCTATTG 121404 29 86.2 0 ...GC...................AT... | ========== ====== ====== ====== ============================= ================================= ================== 79 29 92.9 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //