Array 1 2465001-2466554 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF260912.1 Rhodovulum sulfidophilum DSM 1374 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2465001 29 100.0 32 ............................. GCGATGCAAAAAATGGGGGTCGTCACAAAAGA 2465062 29 100.0 32 ............................. GGGGGTGGCGAGAGGGCGCCGCCGGGCATAGA 2465123 29 100.0 32 ............................. CTGGTGAGCGTCAACCTGGACAGCCTGACATA 2465184 29 100.0 32 ............................. CGCCGACCCCCGGTCGCGTCTGCCAGGTATTC 2465245 29 100.0 32 ............................. TTGTTACGCCAGAGCGCCGTCCCGTAATCTGC 2465306 29 100.0 32 ............................. TGCGATCTGGTGGCGCGGGGTCTGCCGCCACT 2465367 29 100.0 32 ............................. GGGAAAGTCAGGCTCCGCGTTCACAATGGCGC 2465428 29 100.0 32 ............................. CGCTCAGCAAACATGCGCAGGCTGTCGATGCC 2465489 29 100.0 32 ............................. CCTATGTGGTCTTCTCTGATCCAAGAAATTGC 2465550 29 100.0 32 ............................. GGGGGTTACACAGGCGGGGTTACTCTGGACGG 2465611 29 100.0 32 ............................. ATGAAAGCTTGATCTTATGGCCGCTGCAATTG 2465672 29 100.0 32 ............................. ACCGATTGCTCTGCGGCCGGGGGCGTTCTTTC 2465733 29 100.0 32 ............................. AGCCCCATCCACGCCCGCAGTCTGCAATCCGG 2465794 29 100.0 32 ............................. GCATTGGAAAGGCGGGGGAATAGATATGCCCC 2465855 29 100.0 32 ............................. GCGCTGCCGCCCTCCATCCAAGCCCGGCTCAT 2465916 29 100.0 32 ............................. ATCTGCCACCCGAGAGCGGCTAGTGCGTGCGC 2465977 29 100.0 32 ............................. TACCCGGTCACCAACATGCCGAAGGTGGGCGA 2466038 29 100.0 32 ............................. ATGAAAAGGACGCGAAAAAATGGCAAATAGCT 2466099 29 100.0 32 ............................. GGGCGGCAGGCGGTCGAGGCCCGGATGCGCGC 2466160 29 100.0 32 ............................. ACACCCTGGCACGCGCAGGACGGGTGGGAATA 2466221 29 100.0 32 ............................. CACCATGGCGACCTGAGCGCGGCCGAGGTCAA 2466282 29 100.0 32 ............................. GGCAGCCGCGATCCGGAGGCGTGGATCTCCGA 2466343 29 100.0 32 ............................. CCCCTTGCCCGTAGGCTGGGGACCATGGTCGG 2466404 29 96.6 32 .........................G... CCGGAAGACCACATCAGTGTCTGGCTCACCAC 2466465 29 100.0 32 ............................. CGGATGCGCCGGGCGCAGGGAAAGGAGTGAGG 2466526 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 99.7 32 CTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CTGGCCTGCTAAAGAGGATCATTCCTGCCATCGAGGAGGTTCTCTCGGCCGGAAACCTTCCTCGTCCCGAGCCGCCGCCCGAGGCCGTTTCTCCCGCTTTTCCCGATGCGCCGCCGACGGGCGATGCCGGTCACCGATAGTCTATGTTGGTTGTTGTCGTCTCCAACGCCCCACCGCGCCTCCGGGGCAGGCTGTCTGCCTGGTTGGTCGAGGTGCGCGCAGGGGTTTATGTCGGCGACTATTCGGCCCGGACGCGCGAGATGATCTGGGAACAGGTTCTGGCCGGGCTTGATAAGGGGGATGCCGTCATGGTTTGGAAGGCACCGACCGATCAGGGCTACGACTTTGTGACGGCAGGTCAGAACCGCAGGATGCCGGTGGATTTCGACGGATTGAAATTGGTCAGTTTCTTCCCCGAGCCACCAAGCCGATAGGCGGAAGAGGACGGTAGGTTCTTTGACATCGTGAAAAATTTTTTAGATCAACGGTTTGCAGTAAGA # Right flank : GGAGGAGTCGGCCGCACTCTGATAGAAAGTTCCCGTTCTCTGCGCGCCTGGGAGTGAAGCGAGAGCTTGCTAATCATTCCGAATGACTTCCGGTTGTGGTGTACAAAAGCGTCGCGTGGCCGTGCGTCAGCGCTCAACAGATTAACTCCCTCTGACCGCTTCGCCGATCCGCCGCGCGATCTCGCCGGGCGAGGGGGCGATCCATCCGATCAGGGCGACCAGCACGATCCAGGGCGGGATGACATTGACGATGACGGTCTCGACGCGGTCGGCGCGGAGGCGGTTCTCGGACTGCTCCTGGCGGATCTCGCGGGCGCGCGGCCGAACGATGCTGGGCGCGTTCTCGACCTTCTGGCCCTGCACGTTTTCGGCCCCGGCCTGGACATTCGCGGCGAGGTTGGGGCCAAGCGGCGCGGGCAGCCCGCCGCATCCGGCCAGCAGCAGCGCCGCGAGGAGCGCCCTCATGCGCCGTCCCAGCGGAACGGGACATTGGCCGGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //