Array 1 67671-68029 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYBS01000001.1 Listeria sp. ILCC797, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 67671 31 100.0 33 ............................... ACCAGTTCGGAGCGCAACAAACGCAAACCAGTG 67735 31 100.0 35 ............................... CCATGCCATTATCAGAATCACATACACAATAGGCA 67801 31 100.0 33 ............................... TTGCGTAGCATCATTGGTATTAATCCAAGAACA 67865 31 100.0 35 ............................... TTGATGAATTTTGTGACATCTATCCTAATGCTTCC 67931 31 96.8 37 A.............................. GTTGTTAGACCTGAATAGGCTACATCATCTTGAATGG 67999 31 77.4 0 A..............CC.A....C....TG. | ========== ====== ====== ====== =============================== ===================================== ================== 6 31 95.7 35 TGTTTTAATCTATGTATTGTGAAATGTAAAT # Left flank : CGTCAAGCGAAGCGGCGCCGATGTTTTCGTGACGGGAGATATTTATTATCATACAGGGCACGACTTACTTGCGATTGATTTACCTACGATTGATGCGGGACATAATATTGAAAAAGTGATGAAACGTTATTTAAAAACGGAATTTGAAAAAAGGGCGGAAAATCTAAAATATGAGGCTGATTTTATCATTTCAGAAGTCGATACTGATCCGTTCACGTTCTTATGAAAACGAAATTAATTCTTTAAAGCGGCAACTCAGGCAGTGGGAAAGCAACGCTCTTTCAATGTCATTAGAGTAAATTTTTAATTCAATCTGTCGATGTCTAGTAATGTGAAAATGCTGGGACATCGACAGAAATCCGGAATTCATTGCGGGAGAAGGGAAGATGGCGGAAAGAGAGACAATGACTTTCTTTTTTACTCCATTTTTCTCCAAAAATCCGGGGGTCGACAGAAAATCACTTTTGAGCTATGATGGGAGTAAGAGTCACGAGGGTACC # Right flank : TTTAGCCAAATAAAAAGTTAAAGCACAATTAGAGCATATATTAAAACAAAACAAAAAGCATAAATCCAGTAGTGATTCCATTTCAGAAATGGTTTTTACTGGGTTTATGCTTATTTTTTATCGACCGCCGTTTTTTAAATGTTCTAATCGGGCGCGGCGTTTTTCTTCCATGTTTTTCTTTTTGGCACGCGGTAGAATGGCTTCGGCGCTTATTTGGTGGTGGCGTTCCCAAGTTGTGGGGTCATCTGGTTCGTACTGGTCTAAAAAGACGAGCACTTCTCGGATAATATGTGTTGGCGTGCTAGCACCAGCAGTTATCGCCACTTTTTTAGCATCTTTAAGCCAATCTAAATTAATTTCGCTCACATCGGCCACTCGATATGCGGGGACTAAAGCTTTTTCAATCGAAACTTGGGCGAGACGATTCGTGTTATTGCTCCGCGGGTCGCCTACAACAATTGTGACGTCAGCGCCGACAGCTTGTTCTGCAACGGCTTCTT # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTTTAATCTATGTATTGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 155375-155863 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYBS01000003.1 Listeria sp. ILCC797, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 155375 30 100.0 35 .............................. ACGTACTCTTCATCTTTTGTGAAACATGAGAATTC 155440 30 100.0 36 .............................. GACAAAAATGGTAAGTTAGTACTTGGTTATATTTAC 155506 30 100.0 35 .............................. ATTGGTCTGTGGGATGAAATGAATGGAACTACTCA 155571 30 100.0 36 .............................. TCTCATGACAGAAGACAAAGAATATCAAGCGGAAAT 155637 30 100.0 35 .............................. AATTCCAGTTTTTCGTTTTTTTGAGTGATGACATT 155702 30 100.0 36 .............................. TTCTTTCGCGGACTGTTCAATTAACCGCGTTGTTTT 155768 30 90.0 36 ...........C.....A.........G.. TCTGTCGTGACCTTACTTTCAAACTCATTCGCCGCT 155834 30 70.0 0 ....C...T.......CA.A..T.C...TC | ========== ====== ====== ====== ============================== ==================================== ================== 8 30 95.0 36 GTTTTAATCTATGTATTGTGAAATGTAAAT # Left flank : AAACAACGAACTGTGGTTCCACGTCAAGGATTTGCCTGGTTCGCATGTTGTGATCCAAGACCCGAATCCCGATGAAACAGCCATCGAAGAGGCCGCCATGATTGCCGCTTATTTCTCAAAAGCACGTCTATCAAGCACCGTCCCTGTTGACGCAACGCTCGTCAAGCACGTGAAAAAACCAAACGGCGCCAAACCCGGCTATGTCATTTACGATAATCAAACGACCTATTTCGTAACGCCTGACGAAGAAAAAGTCCAAGCATTAAAAAATAAATGAGCCATTGCCCCGGTATGATGTGTATCGGGGTTTTCTGTCGATGTTCGGTAACGTAAAATTGCTGGGGGAACGACAGAAAGTTGGGAATCATTGGGAGAGTAGGAGAACGAGGAGATAATGGAACAATCAATTCGTTTTTCCATCCCATTTTCCACCCAAAAATCTAGGGTCGACAGAAAACCACTTTTGAGCTATGATGAGAGTAGAGCTCGAGAGGGTACCA # Right flank : CCCATTAAAATCCCCCGCCAAAATAAAAACTCTGGTGGGGGATTTTTTATGTTTGGTTTAAACAAATGACCGTAGTTCCTTGTTTTTTGCGAATTTGTAGCTGGCAATGCTGAAAAATAGGAGGGTGTAGCCGAGTAAAATGATGATGTTTAAACTTAAATCGGCAAGTGTTCCGTTTTGTTGGAGTTTTGAGACGGCGTCCATCACCCAGTATTGCGGCATGAAAGCGGCGATTTTTTGCATGATTTCTGGCATGATAGCAATCGGAATTAGCGCGCCAGAAAGTAGCGTTGAAATCGTGAAAATCGTCGTTTGCATCGCTGAAATACTCCTTCTGCTTCCTGCGACAAAGCCGAATGCGAGTGACAGCACGACCGCCATCAGTGAGAACACCGCAAGGATTGCAAATAAATCAACGTATGCAACACCCGGATTAATCCGGAAGGCAAAACGCATTGCAAAGAGACAAATCAGCACCTCAACAAGCACAATCACATAGG # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCTATGTATTGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 172284-171855 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYBS01000003.1 Listeria sp. ILCC797, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 172283 30 100.0 37 .............................. TAAATCTTTTTAATATTTTATAACTTGCCATGTTTCA 172216 30 100.0 37 .............................. GAGGGATTTAGACCAAGCGAACGACGCGCGCGAACAT 172149 30 100.0 37 .............................. GTAATTTGGATCGTATTTTGATTTAAAACTTTGAATT 172082 30 100.0 38 .............................. ACAAAAGTTGACGGTTGGGGATACGCCGAGAAAGACAC 172014 30 100.0 36 .............................. GCGCTTCTTCTACAATTTCTTTTAAAGCTTCTATTT 171948 30 100.0 34 .............................. CCACATCAGAACGTATCTGGCCCAATTCGGCAGT 171884 30 86.7 0 .............C...G...G...G.... | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 98.1 37 GTTTTAATCTATGTATTATGAAATGTAAAT # Left flank : TTATCAAGGTTTTAAGATGTGGTGGTGATTTTATGTATATTATCTTAATCTATGATATTCCAAATGGCGAGGGCAGTGCGAAAGTTGCGCGTAAGATTTTTAAAACTTGTAAAAAATATTTAACACACATTCAAAAGTCCGTTTTTGAAGGGGAGGTTACACCAGCACTTCTCATGCAACTAAAGCTTGAACTTAATCAACATATTCGAAAAGAGATGGACTCTGTCATTATTTTTAATAGTCGCAATCAAAAGTGGCTAGAAAAAGAGTTTTTAGGTCTTGAAGATAGTAAGACATCTAATTTTTTCTAATCTGTCGATGCTAGATAGCGTAAAAACACCTGGGGGTCGACAAAAACTTGTTATCCGTTCTGGCAGAATGGATAACAAGTTTTTTTGTTTGTGAAACTAAGGAAAACTTGAAAAATAACTCCCGAAAATCAGAGGTCGACAGAAAAGCCTTTTTGAGGTAAGATGGGAGTAGGGCTCGCGAGGGTACCT # Right flank : ACAGGAGGCGTATTTTTAGGGTGTTCCATACATAAAGTTTTAATCCGTGCATAAAAACTACAGTTTCTGCATTTTTGTGGTATTCTAGTCTACATATTATGAAATATGGCTGCAATTTAGCATTGGGAAACTAGTTTTTTTAACTACAAAACTACACATTCTAAAAAAGCAAAAATCATTAGAAGCGCAGTGCATCTGCGGAAATGATTTTTGCTTTTATATGTGTTTGTATAGTGATTGCATATGCAATTTGTTTGCGGGGATAAAATGGGTAAAACCCGCTGTTTTTGTAATAATCCGCACTAGCTTTCTTCAAAATGAACAAAAAAGGGGATTATTTTTGCGCGATTGTTCAAAAAATGTCTACAGAAAATGGCGGTGAAGTCTGGTAAGATATTACTTGTGATGAGGAAAACACTGTATGCCTCATCATAAGTATTCCTTTAATTACAAAACGAGCTGTTCAACCTTTTGACCTAGCCATCTTATCTTGGCTAGGG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCTATGTATTATGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //