Array 1 412339-417560 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSUX01000002.1 Aeromonas veronii strain XU1 NODE_2_length_570433_cov_84.254379, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 412339 29 100.0 32 ............................. GATTTGGCCGCGGTAGTTCTCGCGGGCGTCAA 412400 29 100.0 32 ............................. TAACCCGCTCGAACCAGACAAACCCTTGCTGC 412461 29 100.0 32 ............................. CCTTATCTACCGGCGGGACGCTGTTGTCCTCA 412522 29 100.0 33 ............................. GTATGCTGCTCGTCCTTCGGTACCTCGATCGGC 412584 29 100.0 32 ............................. ATCGCCAGCCCAAGCTTGTCGATGCCGGTTGT 412645 29 100.0 32 ............................. GGCATGGGGGTCTGTCAGATCCTGTGGGATAC 412706 29 100.0 32 ............................. ATCACTGTTGCCGCCGCCGTGCGCGCCGTCTA 412767 29 100.0 33 ............................. AGATTGCGGCTGGCAAGATTGACTTGGGGCTGC 412829 29 100.0 32 ............................. ATCGGGGGCCTGCTGTGAGCCTGACAGATAAC 412890 29 100.0 32 ............................. GTGAGCTGGATCTCGAGATCGGCGGTCTTCTC 412951 29 100.0 32 ............................. GGGCAGCGATGGCCGCCCCTTGTGGTTGCAAC 413012 29 100.0 32 ............................. CCCGCGATTAATCGACGACTGGACCTGGTCAA 413073 29 100.0 32 ............................. CGGTACGTCGCCCACGACGGCCGAGAGTTCCC 413134 29 100.0 32 ............................. ACCTAGGCCGCACCGGTCGCCGGTACCCACTG 413195 29 100.0 32 ............................. CACACATCAATGACCGACCTGTCGCTCGTCAA 413256 29 100.0 32 ............................. CTGAACGACCTCGGGATCCCGGATGTGCTCCA 413317 29 100.0 32 ............................. GCGATAGAGACGAGCGTGAAGTGCGGACGGAT 413378 29 100.0 32 ............................. GCAGGGCCATTTTTGGGGGCACCCGCAAAAAC 413439 29 100.0 32 ............................. AGGCCGCAGCCAGTGGCAACGTGCTGGAAGTC 413500 29 100.0 33 ............................. GTCAACCTTCAGCTCGAATACGTGGACAACAGC 413562 29 100.0 32 ............................. ATATTGGAGGGGATACGGTTCGTAATATCGAG 413623 29 100.0 32 ............................. GTCAATGTCAGGTATCGACCCTTCAAATCCGC 413684 29 93.1 32 ..........................G.A CGTTTACGGCATCGACGGCGACTGCCTCGCGC 413745 29 100.0 32 ............................. TACCCAGCCGTTTTGGCTGCGCGGGTATTAAT 413806 29 100.0 32 ............................. GTTGGCCTTCTGCGCCTGCTGTACCTGATTCA 413867 29 100.0 32 ............................. TGGTACTGCGCCTGATGGTTCTGTGGCTGTTC 413928 29 100.0 32 ............................. TTATATTCTCGTTCCGAATAAATGGAACAATA 413989 29 100.0 32 ............................. CCCGTGATCTGGCCGTTGATGGTCATCATTCG 414050 29 100.0 32 ............................. GTTAATAATGATTTCGGTCGGGGCGGTATGAT 414111 29 100.0 32 ............................. CAGGAGGTGCAACGGGCGATAGAGCTTTACGC 414172 29 100.0 32 ............................. GGGGAATACACCATCGACGAGGTAGAGCACAC 414233 29 100.0 32 ............................. TACACAGCGACATGGATTTGAGCCAACTGGCT 414294 29 100.0 32 ............................. GTGTGGTTCAACATCCTGCAAGGCTCAAAGTT 414355 29 100.0 32 ............................. ACGCTCAGGCCGTTGGCGGCTCGGGTGCCAGC 414416 29 100.0 32 ............................. CGCAATCGCTCGGTCCCTATCTCGCCCGAACT 414477 29 100.0 32 ............................. TGCGCAATCAGGTTGTACCCGATGATTTTTGT 414538 29 100.0 32 ............................. CCGTGGCTGATACCCGTGGCGCTGCTGGTCCA 414599 29 100.0 32 ............................. ATCCAGGCGGTAGAGGGGGGCGGCATCAGCAC 414660 29 100.0 32 ............................. TTTATTTGCCGGAGGGTGTTCAGTGGATTGTC 414721 29 100.0 32 ............................. GCGGCGATCCGCGTAATGCTTGACCAGATAGA 414782 29 100.0 32 ............................. GTGATGCACATTTCCGCATTGCTTCCGACCAC 414843 29 100.0 32 ............................. CGCACCTGCAGGGCGTTAACAACCATGGTCAT 414904 29 100.0 32 ............................. CCACGAACTCTAACTGTGGCTTGGACTCCGAG 414965 29 100.0 32 ............................. TGTTGCGAAACTCCGCGCTGGTAAGCGTCGAA 415026 29 100.0 33 ............................. AACAACACCGAGGCGGTTGGCATGTTCACCAAC 415088 29 100.0 32 ............................. GCGAACCCCAATTTGGCGCGGGGCTTGATGCT 415149 29 100.0 32 ............................. GGTTATGGCGCAATAGTGCGCCGTGTTATGCA 415210 29 100.0 32 ............................. CTGGCGACCGGCGCAGCCGTCACCACTGGCGC 415271 29 100.0 33 ............................. TGGGAGGCATGGGTCACGCTGCCTGACGCTTGC 415333 29 100.0 32 ............................. ATGGTGTTATAGGTCAAGCAAGGCCTGCAGAG 415394 29 100.0 32 ............................. TGCGAGTGGCTTGTTGCTGGCATTATGCTGGC 415455 29 100.0 32 ............................. CCCATGCCCAGACGTACCGGGGCCCGCTTGAT 415516 29 100.0 32 ............................. GTTCCCGGCTCCATATTGAGGGCCGGATTTTC 415577 29 100.0 33 ............................. CAAACCCGCTCCGGCTCCCTCCGGGTTGTCTGC 415639 29 100.0 32 ............................. ATGGCGGCGGTTGGCGTGAAGATTATGCGATC 415700 29 100.0 32 ............................. GTCAAGGTCGGCGGCATGACGCTTGATCTGCC 415761 29 100.0 32 ............................. TCGAACGGCTCATCACCCATGGCGGCAATGGC 415822 29 100.0 32 ............................. CGCAACATGGCAGGCATCATCACGCGCGGCAT 415883 29 100.0 32 ............................. ATATCACTGAACATGATGCTTATTGTGCTGGT 415944 29 100.0 32 ............................. GCTTATGAAATTGAGCTTCACTCCCTCGGGAA 416005 29 100.0 32 ............................. CGAGGACTCGTAGAGCTACAGGACTTGAATGG 416066 29 96.6 32 ............................C CACGAGGGTTTTACACGATGACGAAGAAGCTG 416127 29 100.0 33 ............................. ACCGAGGGTCTGGACGACGATGCGCTGTTTGCC 416189 29 96.6 32 ................T............ GCCAACTGCGCTTGAGGTGAGCTTGGTGGAGC 416250 29 93.1 32 ...........T....T............ AGTACTGCGAGGTGGGGCCATCTTACTACTCC 416311 29 93.1 32 ................T...........A GAGGTCGAACTGTTCACGGGCGGCCTTGTACT 416372 29 96.6 32 ............T................ GGACAGCTACCGATCTTAGGTCTGTGCCGGTG 416433 29 100.0 32 ............................. GTGCCGAATGCACCGATGGCGGTCTTGGCTGA 416494 29 100.0 32 ............................. GATGAATTGGCCTTTAACTCTGACGACCTGAT 416555 29 100.0 32 ............................. CAGAAGGCGCGGCCCAGGAGCTCGACCGCGTC 416616 29 100.0 32 ............................. TGCATCAGGGTCTGGTCGCATTCATCGACCAC 416677 29 100.0 32 ............................. AACCTGCAGCAGCAAGCCGCCCGCGACATGCT 416738 29 96.6 32 ................T............ GGCGAGGCGCAGGTGTGGGAAAAGTGGCTACA 416799 29 100.0 32 ............................. CGACCAGCGGTGATCCCGCCGTCATCCTCGAT 416860 29 100.0 32 ............................. AACCTGCAGCAGCAAGCCGCCCGCGACATGCT 416921 29 100.0 33 ............................. AGCGGGGCAGGGGTCAATTACAACCTGTCCAAC 416983 29 96.6 32 ................T............ TGGGCATTCCGCCAAGTGCTGTCGATGTTTGG 417044 29 100.0 32 ............................. TCATCGAGCGTGGCGGGGTCGATGGGGTTATC 417105 29 89.7 32 ...T.......TT................ GGCGGCAGCAGCCACTCAGGCCGACGGACGTT 417166 29 89.7 32 ...........A.C..T............ GCAGAGAGGCGGGTTCGATTCCCGCACGGAGC 417227 29 93.1 32 .C.T......................... ATAGACGAGCTGCAGCGCCAGCTTGCCCACGA 417288 29 96.6 32 ................T............ CGCAGTTGGCCTTGCATTGCTATCAAAGCATC 417349 29 86.2 32 .A............T.TT........... TATTTCGGCAGCTACGCCAGCACAACGTCAGA 417410 29 82.8 32 .A.......A.A.C..T............ AACTACGTCACCGATGTGACCGATGGGGTTAA 417471 29 82.8 32 .A.........A.TT.T............ GTGCTGATGTACTCGTCGGCAGAGTAGGGGTC 417532 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 86 29 98.6 32 CTGCTCCCCGCGCACGCGGGGATGAACCG # Left flank : CCGCTAATTGAAGAGGTGCTTGCTGCAGGGGGGATCACCCCGCCTGAGCCTCCCAAGGATGCTCAGCCGCCCGCCATTCCCGAACCGATCGGCATGGGGGACGCCGGTCACAGGAGTCAGTGATGAGCATGTTGGTCGTCGTGACCGAAGATGTGCCCCCACGTTTGCGTGGTCGGCTGGCTATCTGGTTGCTGGAGGTCCGTGCAGGTGTGTATGTGGGAGATGTCTCGCGCCGTGCACGAGAGATGATCTGGCAGCAGTGTGAGGCATTGGTTGAGCAGGGCAATATCGTGATGGCATGGTCTGCTAACAACGACTCAGGGTTTGACTTTCAAACCTTGGGAGCAAATAGAAGGATGCCGGTGGACTTGGATGGCTGCCGGTTAGTCTCATTTCTACCCTTTGAAAATCAATAGGTTATCGTTCATTAACAATCTGGATTAGTTGGTGGCTTTTTTATGGTTTGAAAAAGCCATTTAAATCAATAACATCCATTAAGT # Right flank : GTATGTAGATGTTGAGCTTTATCCCGCGCGGCGCCGTTCCCCACGTTCGTTGGGATGGAGACCAGCTACAGTCACAACTCTAGGTACTCAAATGTCTACCAGCTAATCAACGATGGCCACAGTGCGGAGGACGCATCCCGAATGCTTGGCCTACCGCTGCGAACGGTTAACGACATACGACATCCTGGGGATCGAGGAATAAACAAAGGGGCTCACGGCCCCTTTGTTATTGGTTCATCCAGTGTAACCACTATCTCGACAGACTCACCGAAGTGAAGGCGGGCGAGTCTGATTAGTTCTGCCACATCTGGGTAGTTGTCACGGACGTACTGACGCCGTTCCTCCAGTGACATTTCAGCGGACACGCGGCCCCCCTTTTTTCAATTCACTTGGCCACCCTCAAGAGTCGTAAACCCTTAAAGTTTAAGCCGTTTAAGAATCCTTCCAACTTTTACTTCGCCCCTGCGTGCGAAGCAAACGCAGAGGGGCGTGCTAAAGCC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-32] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //